RNA–Protein interactions for RNA: ENST00000477155.5

CCDC30-209, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 3,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-209ENST00000477155 MOCS1Q9NZB8 636 aa6.75□□□□□ -1.33
CCDC30-209ENST00000477155 PSAT1Q9Y617 370 aa6.75□□□□□ -1.33
CCDC30-209ENST00000477155 NYNRINQ9P2P1 1898 aaKnown RBP6.75□□□□□ -1.33
CCDC30-209ENST00000477155 PTPRSQ13332 1948 aa6.75□□□□□ -1.33
CCDC30-209ENST00000477155 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.74□□□□□ -1.33
CCDC30-209ENST00000477155 ERI2A8K979 691 aaKnown RBP6.74□□□□□ -1.33
CCDC30-209ENST00000477155 CBX4O00257 560 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 ANXA9O76027 345 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 SUN1O94901 812 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 NMBRP28336 390 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 ABCG1P45844 678 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 WDR4P57081 412 aaKnown RBP6.74□□□□□ -1.33
CCDC30-209ENST00000477155 GNA12Q03113 381 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 NIPAL4Q0D2K0 466 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 ZNF177Q13360 481 aaPredicted RBP6.74□□□□□ -1.33
CCDC30-209ENST00000477155 SLC1A5Q15758 541 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 SEPT7Q16181 437 aaKnown RBP6.74□□□□□ -1.33
CCDC30-209ENST00000477155 PABPC1LQ4VXU2 614 aaKnown RBP6.74□□□□□ -1.33
CCDC30-209ENST00000477155 HSP90AA5PQ58FG0 334 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 PSRC1Q6PGN9 363 aaPredicted RBP6.74□□□□□ -1.33
CCDC30-209ENST00000477155 LILRA6Q6PI73 481 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 CARNMT1Q8N4J0 409 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 MRPL43Q8N983 215 aaKnown RBP6.74□□□□□ -1.33
CCDC30-209ENST00000477155 MRPS31Q92665 395 aaKnown RBP6.74□□□□□ -1.33
CCDC30-209ENST00000477155 ATP2A3Q93084 1043 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 PLD4Q96BZ4 506 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 EXOC2Q96KP1 924 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 AGAP2Q99490 1192 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 TBL1YQ9BQ87 522 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 TMEM51Q9NW97 253 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 ZFATQ9P243 1243 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 E2F8A0AVK6 867 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 FAM159BA6NKW6 160 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 TCP11X1B4DZS4 312 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 KRT37O76014 449 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 GLUD1P00367 558 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 WNT3AP56704 352 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 SEPT6Q14141 434 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 IHHQ14623 411 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 ZKSCAN8Q15776 578 aaPredicted RBP6.74□□□□□ -1.33
CCDC30-209ENST00000477155 ANKRD20A4Q4UJ75 823 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 RABGAP1LQ5R372 815 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 TTC39BQ5VTQ0 682 aaPredicted RBP6.74□□□□□ -1.33
CCDC30-209ENST00000477155 LRRC49Q8IUZ0 686 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 LRRC34Q8IZ02 419 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 PGBD5Q8N414 524 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 SPPL3Q8TCT6 385 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 TCP10LQ8TDR4 215 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 ZNF473Q8WTR7 871 aaKnown RBP6.74□□□□□ -1.33
CCDC30-209ENST00000477155 MZB1Q8WU39 189 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 AZIN2Q96A70 460 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 CHMP6Q96FZ7 201 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 MRGPRX2Q96LB1 330 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 LBHD1Q9BQE6 289 aaPredicted RBP6.74□□□□□ -1.33
CCDC30-209ENST00000477155 EMILIN2Q9BXX0 1053 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 MUC3BQ9H195 1237 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 PPCSQ9HAB8 311 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 FETUBQ9UGM5 382 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 SSX2IPQ9Y2D8 614 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 FAM169AQ9Y6X4 670 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 BPTFQ12830 3046 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 LINC01553A4QN01 128 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 C2orf71A6NGG8 1288 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 H0Y626 953 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 MUSKO15146 869 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 GRM6O15303 877 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 TBL1XO60907 577 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 RHOCP08134 193 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 SNRPAP09012 282 aaKnown RBP6.74□□□□□ -1.33
CCDC30-209ENST00000477155 GEMP55040 296 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 CDH4P55283 916 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 YBEYP58557 167 aaPredicted RBP6.74□□□□□ -1.33
CCDC30-209ENST00000477155 LBRQ14739 615 aaKnown RBP6.74□□□□□ -1.33
CCDC30-209ENST00000477155 PARP15Q460N3 678 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 FSCBQ5H9T9 825 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 RNF219Q5W0B1 726 aaPredicted RBP6.74□□□□□ -1.33
CCDC30-209ENST00000477155 LINGO4Q6UY18 593 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 TPGS1Q6ZTW0 290 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 LINC00523Q86TU6 105 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 RASSF3Q86WH2 238 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 ZNF276Q8N554 614 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 CDKL2Q92772 493 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 CENPTQ96BT3 561 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 TMA16Q96EY4 203 aaKnown RBP6.74□□□□□ -1.33
CCDC30-209ENST00000477155 CERS2Q96G23 380 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 ZFRQ96KR1 1074 aaKnown RBP6.74□□□□□ -1.33
CCDC30-209ENST00000477155 SEMA3CQ99985 751 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 C20orf96Q9NUD7 363 aaPredicted RBP6.74□□□□□ -1.33
CCDC30-209ENST00000477155 TXNDC16Q9P2K2 825 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 SLC17A7Q9P2U7 560 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 ACTL7BQ9Y614 415 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 SZT2Q5T011 3432 aa6.74□□□□□ -1.33
CCDC30-209ENST00000477155 ANKRD65E5RJM6 399 aa6.73□□□□□ -1.33
CCDC30-209ENST00000477155 H3BNC9 293 aa6.73□□□□□ -1.33
CCDC30-209ENST00000477155 CACNG3O60359 315 aa6.73□□□□□ -1.33
CCDC30-209ENST00000477155 ZNF189O75820 626 aaPredicted RBP6.73□□□□□ -1.33
CCDC30-209ENST00000477155 FAM107AO95990 144 aa6.73□□□□□ -1.33
CCDC30-209ENST00000477155 C1RP00736 705 aa6.73□□□□□ -1.33
CCDC30-209ENST00000477155 CCR2P41597 374 aa6.73□□□□□ -1.33
CCDC30-209ENST00000477155 PPP3CCP48454 512 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms