RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 INTS6Q9UL03 887 aaKnown RBP18.43■□□□□ 0.54
ATG4B-217ENST00000475693 USP15Q9Y4E8 981 aaPredicted RBP18.43■□□□□ 0.54
ATG4B-217ENST00000475693 ILVBLA1L0T0 632 aa18.42■□□□□ 0.54
ATG4B-217ENST00000475693 TYW5A2RUC4 315 aaKnown RBP18.42■□□□□ 0.54
ATG4B-217ENST00000475693 FASTKD3Q14CZ7 662 aaKnown RBP18.42■□□□□ 0.54
ATG4B-217ENST00000475693 C12orf40Q86WS4 652 aa18.42■□□□□ 0.54
ATG4B-217ENST00000475693 ALG14Q96F25 216 aa18.42■□□□□ 0.54
ATG4B-217ENST00000475693 EXOC2Q96KP1 924 aa18.42■□□□□ 0.54
ATG4B-217ENST00000475693 CAPS2Q9BXY5 557 aa18.42■□□□□ 0.54
ATG4B-217ENST00000475693 MAGEH1Q9H213 219 aa18.42■□□□□ 0.54
ATG4B-217ENST00000475693 ATP8A1Q9Y2Q0 1164 aa18.42■□□□□ 0.54
ATG4B-217ENST00000475693 OR51B4Q9Y5P0 310 aa18.42■□□□□ 0.54
ATG4B-217ENST00000475693 ATXN2Q99700 1313 aaKnown RBP18.42■□□□□ 0.54
ATG4B-217ENST00000475693 ANTXRLA6NF34 631 aa18.42■□□□□ 0.54
ATG4B-217ENST00000475693 EIF3HO15372 352 aaKnown RBP eCLIP18.42■□□□□ 0.54
ATG4B-217ENST00000475693 PRAMEF11O60813 436 aa18.42■□□□□ 0.54
ATG4B-217ENST00000475693 CD160O95971 181 aa18.42■□□□□ 0.54
ATG4B-217ENST00000475693 LAMP2P13473 410 aa18.42■□□□□ 0.54
ATG4B-217ENST00000475693 POU3F3P20264 500 aaPredicted RBP18.42■□□□□ 0.54
ATG4B-217ENST00000475693 CTSOP43234 321 aaPredicted RBP18.42■□□□□ 0.54
ATG4B-217ENST00000475693 YBEYP58557 167 aaPredicted RBP18.42■□□□□ 0.54
ATG4B-217ENST00000475693 ARF5P84085 180 aa18.42■□□□□ 0.54
ATG4B-217ENST00000475693 DHX9Q08211 1270 aaKnown RBP18.42■□□□□ 0.54
ATG4B-217ENST00000475693 ITKQ08881 620 aa18.42■□□□□ 0.54
ATG4B-217ENST00000475693 KCNJ11Q14654 390 aa18.42■□□□□ 0.54
ATG4B-217ENST00000475693 DHCR24Q15392 516 aa18.42■□□□□ 0.54
ATG4B-217ENST00000475693 EML3Q32P44 896 aa18.42■□□□□ 0.54
ATG4B-217ENST00000475693 EMC10Q5UCC4 262 aa18.42■□□□□ 0.54
ATG4B-217ENST00000475693 SETD3Q86TU7 594 aaPredicted RBP18.42■□□□□ 0.54
ATG4B-217ENST00000475693 OXNAD1Q96HP4 312 aaPredicted RBP18.42■□□□□ 0.54
ATG4B-217ENST00000475693 RPL10LQ96L21 214 aaKnown RBP18.42■□□□□ 0.54
ATG4B-217ENST00000475693 IL12RB2Q99665 862 aa18.42■□□□□ 0.54
ATG4B-217ENST00000475693 APOL2Q9BQE5 337 aa18.42■□□□□ 0.54
ATG4B-217ENST00000475693 MLPHQ9BV36 600 aaPredicted RBP18.42■□□□□ 0.54
ATG4B-217ENST00000475693 PDFQ9HBH1 243 aa18.42■□□□□ 0.54
ATG4B-217ENST00000475693 ZFP14Q9HCL3 533 aa18.42■□□□□ 0.54
ATG4B-217ENST00000475693 GRXCR2A6NFK2 248 aa18.41■□□□□ 0.54
ATG4B-217ENST00000475693 SOBPA7XYQ1 873 aa18.41■□□□□ 0.54
ATG4B-217ENST00000475693 CYP17A1P05093 508 aa18.41■□□□□ 0.54
ATG4B-217ENST00000475693 OXCT1P55809 520 aa18.41■□□□□ 0.54
ATG4B-217ENST00000475693 PPIL6Q8IXY8 311 aa18.41■□□□□ 0.54
ATG4B-217ENST00000475693 UHMK1Q8TAS1 419 aaKnown RBP18.41■□□□□ 0.54
ATG4B-217ENST00000475693 CCHCR1Q8TD31 782 aa18.41■□□□□ 0.54
ATG4B-217ENST00000475693 CHD5Q8TDI0 1954 aa18.41■□□□□ 0.54
ATG4B-217ENST00000475693 OSCP1Q8WVF1 389 aa18.41■□□□□ 0.54
ATG4B-217ENST00000475693 ACE2Q9BYF1 805 aaPredicted RBP18.41■□□□□ 0.54
ATG4B-217ENST00000475693 BRD8Q9H0E9 1235 aa18.41■□□□□ 0.54
ATG4B-217ENST00000475693 GTSE1Q9NYZ3 720 aa18.41■□□□□ 0.54
ATG4B-217ENST00000475693 TMEM265A0A087WTH1 108 aa18.41■□□□□ 0.54
ATG4B-217ENST00000475693 EBAG9O00559 213 aa18.41■□□□□ 0.54
ATG4B-217ENST00000475693 KDELR3O43731 214 aa18.41■□□□□ 0.54
ATG4B-217ENST00000475693 OPHN1O60890 802 aa18.41■□□□□ 0.54
ATG4B-217ENST00000475693 STK10O94804 968 aaKnown RBP18.41■□□□□ 0.54
ATG4B-217ENST00000475693 CYBBP04839 570 aa18.41■□□□□ 0.54
ATG4B-217ENST00000475693 BMP1P13497 986 aa18.41■□□□□ 0.54
ATG4B-217ENST00000475693 MARC1Q5VT66 337 aa18.41■□□□□ 0.54
ATG4B-217ENST00000475693 TTC39BQ5VTQ0 682 aaPredicted RBP18.41■□□□□ 0.54
ATG4B-217ENST00000475693 AGGF1Q8N302 714 aaeCLIP18.41■□□□□ 0.54
ATG4B-217ENST00000475693 MREGQ8N565 214 aa18.41■□□□□ 0.54
ATG4B-217ENST00000475693 NSMCE3Q96MG7 304 aa18.41■□□□□ 0.54
ATG4B-217ENST00000475693 RBM15Q96T37 977 aaKnown RBP eCLIP18.41■□□□□ 0.541e-11■■□□□ 13.7
ATG4B-217ENST00000475693 TRIM56Q9BRZ2 755 aaKnown RBP18.41■□□□□ 0.54
ATG4B-217ENST00000475693 E7EVH7 732 aa18.4■□□□□ 0.54
ATG4B-217ENST00000475693 PENKP01210 267 aaPredicted RBP18.4■□□□□ 0.54
ATG4B-217ENST00000475693 RGRP47804 291 aa18.4■□□□□ 0.54
ATG4B-217ENST00000475693 SLC6A11P48066 632 aa18.4■□□□□ 0.54
ATG4B-217ENST00000475693 IFI35P80217 286 aaPredicted RBP18.4■□□□□ 0.54
ATG4B-217ENST00000475693 DSC2Q02487 901 aa18.4■□□□□ 0.54
ATG4B-217ENST00000475693 IL10RBQ08334 325 aa18.4■□□□□ 0.54
ATG4B-217ENST00000475693 LBRQ14739 615 aaKnown RBP18.4■□□□□ 0.54
ATG4B-217ENST00000475693 COL19A1Q14993 1142 aa18.4■□□□□ 0.54
ATG4B-217ENST00000475693 SFTPA1Q8IWL2 248 aa18.4■□□□□ 0.54
ATG4B-217ENST00000475693 SORCS1Q8WY21 1168 aa18.4■□□□□ 0.54
ATG4B-217ENST00000475693 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.4■□□□□ 0.54
ATG4B-217ENST00000475693 MAML1Q92585 1016 aa18.4■□□□□ 0.54
ATG4B-217ENST00000475693 RIPOR3Q96MK2 946 aa18.4■□□□□ 0.54
ATG4B-217ENST00000475693 GUCD1Q96NT3 240 aa18.4■□□□□ 0.54
ATG4B-217ENST00000475693 SEMA4AQ9H3S1 761 aa18.4■□□□□ 0.54
ATG4B-217ENST00000475693 TBC1D14Q9P2M4 693 aa18.4■□□□□ 0.54
ATG4B-217ENST00000475693 VPS51Q9UID3 782 aa18.4■□□□□ 0.54
ATG4B-217ENST00000475693 NUP210Q8TEM1 1887 aaPredicted RBP18.4■□□□□ 0.54
ATG4B-217ENST00000475693 ZMPSTE24O75844 475 aa18.39■□□□□ 0.54
ATG4B-217ENST00000475693 STK19P49842 368 aaPredicted RBP18.39■□□□□ 0.54
ATG4B-217ENST00000475693 NIPAL4Q0D2K0 466 aa18.39■□□□□ 0.54
ATG4B-217ENST00000475693 PRPF38BQ5VTL8 546 aaKnown RBP18.39■□□□□ 0.54
ATG4B-217ENST00000475693 TIGD7Q6NT04 549 aaPredicted RBP18.39■□□□□ 0.54
ATG4B-217ENST00000475693 CAPN12Q6ZSI9 719 aa18.39■□□□□ 0.54
ATG4B-217ENST00000475693 TMC3Q7Z5M5 1100 aa18.39■□□□□ 0.54
ATG4B-217ENST00000475693 SPATS2Q86XZ4 545 aaKnown RBP18.39■□□□□ 0.54
ATG4B-217ENST00000475693 ANKMY2Q8IV38 441 aa18.39■□□□□ 0.54
ATG4B-217ENST00000475693 FIBINQ8TAL6 211 aa18.39■□□□□ 0.54
ATG4B-217ENST00000475693 RUFY1Q96T51 708 aa18.39■□□□□ 0.54
ATG4B-217ENST00000475693 LRRC4CQ9HCJ2 640 aa18.39■□□□□ 0.54
ATG4B-217ENST00000475693 HPS4Q9NQG7 708 aa18.39■□□□□ 0.54
ATG4B-217ENST00000475693 DONSONQ9NYP3 566 aa18.39■□□□□ 0.54
ATG4B-217ENST00000475693 FCF1Q9Y324 198 aaKnown RBP18.39■□□□□ 0.54
ATG4B-217ENST00000475693 VGLL3A8MV65 326 aa18.39■□□□□ 0.53
ATG4B-217ENST00000475693 SMAD6O43541 496 aaKnown RBP18.39■□□□□ 0.53
ATG4B-217ENST00000475693 NEBLO76041 1014 aa18.39■□□□□ 0.53
ATG4B-217ENST00000475693 MMP13P45452 471 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms