RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 VPS51Q9UID3 782 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 RNF112Q9ULX5 631 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 ATRNL1Q5VV63 1379 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 SLC2A3P11169 496 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 CDK9P50750 372 aaKnown RBP11.68□□□□□ -0.54
U2AF1-209ENST00000475639 CD300CQ08708 224 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 TRAF3Q13114 568 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 KLF1Q13351 362 aaPredicted RBP11.68□□□□□ -0.54
U2AF1-209ENST00000475639 SCARA3Q6AZY7 606 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 TMEM214Q6NUQ4 689 aaKnown RBP11.68□□□□□ -0.54
U2AF1-209ENST00000475639 NEPROQ6NW34 567 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 GLB1LQ6UWU2 654 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 DCDC5Q6ZRR9 648 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 MYO1HQ8N1T3 1032 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 LRRC71Q8N4P6 559 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 MCEEQ96PE7 176 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 TMEM79Q9BSE2 394 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 RABGEF1Q9UJ41 708 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 DYRK1BQ9Y463 629 aa11.68□□□□□ -0.54
U2AF1-209ENST00000475639 FAM20BO75063 409 aa11.67□□□□□ -0.54
U2AF1-209ENST00000475639 MED24O75448 989 aa11.67□□□□□ -0.54
U2AF1-209ENST00000475639 SCGNO76038 276 aa11.67□□□□□ -0.54
U2AF1-209ENST00000475639 CPSF4O95639 269 aaKnown RBP11.67□□□□□ -0.54
U2AF1-209ENST00000475639 GEMP55040 296 aa11.67□□□□□ -0.54
U2AF1-209ENST00000475639 POLD3Q15054 466 aaPredicted RBP11.67□□□□□ -0.54
U2AF1-209ENST00000475639 SMUG1Q53HV7 270 aa11.67□□□□□ -0.54
U2AF1-209ENST00000475639 DCAF6Q58WW2 860 aa11.67□□□□□ -0.54
U2AF1-209ENST00000475639 TBCELQ5QJ74 424 aa11.67□□□□□ -0.54
U2AF1-209ENST00000475639 SEPT12Q8IYM1 358 aa11.67□□□□□ -0.54
U2AF1-209ENST00000475639 TAF1LQ8IZX4 1826 aa11.67□□□□□ -0.54
U2AF1-209ENST00000475639 H3BN98 237 aa11.67□□□□□ -0.54
U2AF1-209ENST00000475639 LDLRP01130 860 aa11.67□□□□□ -0.54
U2AF1-209ENST00000475639 IL1BP01584 269 aa11.67□□□□□ -0.54
U2AF1-209ENST00000475639 CYP1A2P05177 515 aa11.67□□□□□ -0.54
U2AF1-209ENST00000475639 ZSCAN5DPP0CG00 497 aa11.67□□□□□ -0.54
U2AF1-209ENST00000475639 PTPN1P18031 435 aaKnown RBP11.67□□□□□ -0.54
U2AF1-209ENST00000475639 DDI2Q5TDH0 399 aa11.67□□□□□ -0.54
U2AF1-209ENST00000475639 PLA2G4FQ68DD2 849 aa11.67□□□□□ -0.54
U2AF1-209ENST00000475639 LMBRD2Q68DH5 695 aaPredicted RBP11.67□□□□□ -0.54
U2AF1-209ENST00000475639 SLC7A5P1Q8MH63 180 aa11.67□□□□□ -0.54
U2AF1-209ENST00000475639 MIER2Q8N344 545 aa11.67□□□□□ -0.54
U2AF1-209ENST00000475639 CHST12Q9NRB3 414 aa11.67□□□□□ -0.54
U2AF1-209ENST00000475639 CNTN3Q9P232 1028 aa11.67□□□□□ -0.54
U2AF1-209ENST00000475639 TMA7Q9Y2S6 64 aaKnown RBP11.67□□□□□ -0.54
U2AF1-209ENST00000475639 WWP2O00308 870 aa11.67□□□□□ -0.54
U2AF1-209ENST00000475639 MYL12BO14950 172 aa11.67□□□□□ -0.54
U2AF1-209ENST00000475639 FOXD2O60548 495 aaPredicted RBP11.67□□□□□ -0.54
U2AF1-209ENST00000475639 OR6A2O95222 327 aa11.67□□□□□ -0.54
U2AF1-209ENST00000475639 TGFBR2P37173 567 aa11.67□□□□□ -0.54
U2AF1-209ENST00000475639 CRKLP46109 303 aaKnown RBP11.67□□□□□ -0.54
U2AF1-209ENST00000475639 TMEM132DQ14C87 1099 aa11.67□□□□□ -0.54
U2AF1-209ENST00000475639 PGM2L1Q6PCE3 622 aa11.67□□□□□ -0.54
U2AF1-209ENST00000475639 KCTD17Q8N5Z5 321 aa11.67□□□□□ -0.54
U2AF1-209ENST00000475639 GPRASP2Q96D09 838 aa11.67□□□□□ -0.54
U2AF1-209ENST00000475639 EIF2AK1Q9BQI3 630 aaKnown RBP11.67□□□□□ -0.54
U2AF1-209ENST00000475639 DCUN1D5Q9BTE7 237 aa11.67□□□□□ -0.54
U2AF1-209ENST00000475639 CLPBQ9H078 707 aa11.67□□□□□ -0.54
U2AF1-209ENST00000475639 ZNF395Q9H8N7 513 aaPredicted RBP11.67□□□□□ -0.54
U2AF1-209ENST00000475639 ANAPC2Q9UJX6 822 aa11.67□□□□□ -0.54
U2AF1-209ENST00000475639 GPC6Q9Y625 555 aaPredicted RBP11.67□□□□□ -0.54
U2AF1-209ENST00000475639 PSMD12O00232 456 aaPredicted RBP11.66□□□□□ -0.54
U2AF1-209ENST00000475639 ANXA6P08133 673 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 SERPINB5P36952 375 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 MTM1Q13496 603 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 CCNG2Q16589 344 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 BMT2Q1RMZ1 405 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 ZNF284Q2VY69 593 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 SBK1Q52WX2 424 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 CES4AQ5XG92 561 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 ADGRD1Q6QNK2 874 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 FAM196AQ6ZSG2 479 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 PHACTR4Q8IZ21 702 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 EID3Q8N140 333 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 LMO3Q8TAP4 145 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 WRNIP1Q96S55 665 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 RANBP9Q96S59 729 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 PAFAH2Q99487 392 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 RAB26Q9ULW5 256 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 POMPQ9Y244 141 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 ACOT9Q9Y305 439 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 PPP2R3BQ9Y5P8 575 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 CLUHO75153 1309 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 ALOX15BO15296 676 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 ITGALP20701 1170 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 TTKP33981 857 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 CLCN2P51788 898 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 NR6A1Q15406 480 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 OTUD3Q5T2D3 398 aaPredicted RBP11.66□□□□□ -0.54
U2AF1-209ENST00000475639 MTSS1LQ765P7 747 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 KBTBD6Q86V97 674 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 FAM20CQ8IXL6 584 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 CPA5Q8WXQ8 436 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 ITPKCQ96DU7 683 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 RACGAP1Q9H0H5 632 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 TPK1Q9H3S4 243 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 ZNF304Q9HCX3 659 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 TRNAU1APQ9NX07 287 aaKnown RBP11.66□□□□□ -0.54
U2AF1-209ENST00000475639 K7EPI3 171 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 SGPL1O95470 568 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 NFICP08651 508 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms