RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 TMIEQ8NEW7 156 aa18.98■□□□□ 0.63
COL7A1-209ENST00000474432 ANKRD20A12PQ8NF67 263 aa18.98■□□□□ 0.63
COL7A1-209ENST00000474432 FAM172AQ8WUF8 416 aa18.98■□□□□ 0.63
COL7A1-209ENST00000474432 BAP1Q92560 729 aa18.98■□□□□ 0.63
COL7A1-209ENST00000474432 SERAC1Q96JX3 654 aa18.98■□□□□ 0.63
COL7A1-209ENST00000474432 ELF4Q99607 663 aaPredicted RBP18.98■□□□□ 0.63
COL7A1-209ENST00000474432 SPON2Q9BUD6 331 aa18.98■□□□□ 0.63
COL7A1-209ENST00000474432 TNKS2Q9H2K2 1166 aa18.98■□□□□ 0.63
COL7A1-209ENST00000474432 AASDHPPTQ9NRN7 309 aa18.98■□□□□ 0.63
COL7A1-209ENST00000474432 TPX2Q9ULW0 747 aaKnown RBP18.98■□□□□ 0.63
COL7A1-209ENST00000474432 WASF2Q9Y6W5 498 aa18.98■□□□□ 0.63
COL7A1-209ENST00000474432 COL5A1P20908 1838 aaPredicted RBP18.97■□□□□ 0.63
COL7A1-209ENST00000474432 ZFHX4Q86UP3 3567 aa18.97■□□□□ 0.63
COL7A1-209ENST00000474432 SIGLEC16A6NMB1 481 aa18.97■□□□□ 0.63
COL7A1-209ENST00000474432 CBX4O00257 560 aa18.97■□□□□ 0.63
COL7A1-209ENST00000474432 LRIG2O94898 1065 aa18.97■□□□□ 0.63
COL7A1-209ENST00000474432 MAT2AP31153 395 aaKnown RBP18.97■□□□□ 0.63
COL7A1-209ENST00000474432 NSFP46459 744 aaKnown RBP18.97■□□□□ 0.63
COL7A1-209ENST00000474432 SERPINH1P50454 418 aaKnown RBP18.97■□□□□ 0.63
COL7A1-209ENST00000474432 C21orf59P57076 290 aa18.97■□□□□ 0.63
COL7A1-209ENST00000474432 NXPH1P58417 271 aa18.97■□□□□ 0.63
COL7A1-209ENST00000474432 ANO6Q4KMQ2 910 aa18.97■□□□□ 0.63
COL7A1-209ENST00000474432 NAPEPLDQ6IQ20 393 aa18.97■□□□□ 0.63
COL7A1-209ENST00000474432 DPY19L3Q6ZPD9 716 aa18.97■□□□□ 0.63
COL7A1-209ENST00000474432 NTAN1Q96AB6 310 aa18.97■□□□□ 0.63
COL7A1-209ENST00000474432 ATP13A1Q9HD20 1204 aa18.97■□□□□ 0.63
COL7A1-209ENST00000474432 RTN4Q9NQC3 1192 aaKnown RBP18.97■□□□□ 0.63
COL7A1-209ENST00000474432 TMEM248Q9NWD8 314 aa18.97■□□□□ 0.63
COL7A1-209ENST00000474432 ZMIZ1Q9ULJ6 1067 aa18.97■□□□□ 0.63
COL7A1-209ENST00000474432 TLR4O00206 839 aa18.96■□□□□ 0.63
COL7A1-209ENST00000474432 DFNA5O60443 496 aa18.96■□□□□ 0.63
COL7A1-209ENST00000474432 CALB1P05937 261 aa18.96■□□□□ 0.63
COL7A1-209ENST00000474432 RHOQP17081 205 aa18.96■□□□□ 0.63
COL7A1-209ENST00000474432 GPD1P21695 349 aa18.96■□□□□ 0.63
COL7A1-209ENST00000474432 RPL7AP62424 266 aaKnown RBP18.96■□□□□ 0.63
COL7A1-209ENST00000474432 C1QBPQ07021 282 aaKnown RBP18.96■□□□□ 0.63
COL7A1-209ENST00000474432 SCAPQ12770 1279 aa18.96■□□□□ 0.63
COL7A1-209ENST00000474432 SUZ12Q15022 739 aaKnown RBP18.96■□□□□ 0.63
COL7A1-209ENST00000474432 ARSIQ5FYB1 569 aa18.96■□□□□ 0.63
COL7A1-209ENST00000474432 KANSL1Q7Z3B3 1105 aa18.96■□□□□ 0.63
COL7A1-209ENST00000474432 PRPF39Q86UA1 669 aaKnown RBP18.96■□□□□ 0.63
COL7A1-209ENST00000474432 GATAD2AQ86YP4 633 aa18.96■□□□□ 0.63
COL7A1-209ENST00000474432 MFSD2AQ8NA29 543 aa18.96■□□□□ 0.63
COL7A1-209ENST00000474432 SAP25Q8TEE9 199 aa18.96■□□□□ 0.63
COL7A1-209ENST00000474432 ARHGEF2Q92974 986 aaKnown RBP18.96■□□□□ 0.63
COL7A1-209ENST00000474432 CDC6Q99741 560 aa18.96■□□□□ 0.63
COL7A1-209ENST00000474432 BPIFA3Q9BQP9 254 aa18.96■□□□□ 0.63
COL7A1-209ENST00000474432 CEP44Q9C0F1 390 aa18.96■□□□□ 0.63
COL7A1-209ENST00000474432 NOL6Q9H6R4 1146 aaKnown RBP18.96■□□□□ 0.63
COL7A1-209ENST00000474432 PREBQ9HCU5 417 aa18.96■□□□□ 0.63
COL7A1-209ENST00000474432 TAS2R14Q9NYV8 317 aa18.96■□□□□ 0.63
COL7A1-209ENST00000474432 APOBEC2Q9Y235 224 aaKnown RBP18.96■□□□□ 0.63
COL7A1-209ENST00000474432 CA5BQ9Y2D0 317 aa18.96■□□□□ 0.63
COL7A1-209ENST00000474432 CFAP47Q6ZTR5 3102 aa18.96■□□□□ 0.63
COL7A1-209ENST00000474432 KPNA3O00505 521 aaPredicted RBP18.95■□□□□ 0.62
COL7A1-209ENST00000474432 CCP110O43303 1012 aa18.95■□□□□ 0.62
COL7A1-209ENST00000474432 PLEKP08567 350 aaPredicted RBP18.95■□□□□ 0.62
COL7A1-209ENST00000474432 GRK6P43250 576 aa18.95■□□□□ 0.62
COL7A1-209ENST00000474432 SLC20A2Q08357 652 aa18.95■□□□□ 0.62
COL7A1-209ENST00000474432 ARL13BQ3SXY8 428 aa18.95■□□□□ 0.62
COL7A1-209ENST00000474432 RETSATQ6NUM9 610 aa18.95■□□□□ 0.62
COL7A1-209ENST00000474432 PYROXD2Q8N2H3 581 aa18.95■□□□□ 0.62
COL7A1-209ENST00000474432 TMEM145Q8NBT3 493 aa18.95■□□□□ 0.62
COL7A1-209ENST00000474432 SELENOOQ9BVL4 669 aa18.95■□□□□ 0.62
COL7A1-209ENST00000474432 IL36AQ9UHA7 158 aa18.95■□□□□ 0.62
COL7A1-209ENST00000474432 DNAI1Q9UI46 699 aa18.95■□□□□ 0.62
COL7A1-209ENST00000474432 ZFR2Q9UPR6 939 aaKnown RBP18.95■□□□□ 0.62
COL7A1-209ENST00000474432 DMTF1Q9Y222 760 aa18.95■□□□□ 0.62
COL7A1-209ENST00000474432 FCF1Q9Y324 198 aaKnown RBP18.95■□□□□ 0.62
COL7A1-209ENST00000474432 PKD1L2Q7Z442 2459 aa18.95■□□□□ 0.62
COL7A1-209ENST00000474432 CXorf51AA0A1B0GTR3 108 aa18.94■□□□□ 0.62
COL7A1-209ENST00000474432 RNGTTO60942 597 aaKnown RBP18.94■□□□□ 0.62
COL7A1-209ENST00000474432 LEFTY1O75610 366 aa18.94■□□□□ 0.62
COL7A1-209ENST00000474432 PRNPP04156 253 aa18.94■□□□□ 0.62
COL7A1-209ENST00000474432 FERP16591 822 aa18.94■□□□□ 0.62
COL7A1-209ENST00000474432 NUDT1P36639 197 aa18.94■□□□□ 0.62
COL7A1-209ENST00000474432 RXRGP48443 463 aa18.94■□□□□ 0.62
COL7A1-209ENST00000474432 MAPKAPK2P49137 400 aa18.94■□□□□ 0.62
COL7A1-209ENST00000474432 ZNF143P52747 638 aaPredicted RBP18.94■□□□□ 0.62
COL7A1-209ENST00000474432 OGDHQ02218 1023 aa18.94■□□□□ 0.62
COL7A1-209ENST00000474432 ZNF284Q2VY69 593 aa18.94■□□□□ 0.62
COL7A1-209ENST00000474432 E4F1Q66K89 784 aaPredicted RBP18.94■□□□□ 0.62
COL7A1-209ENST00000474432 ACAD10Q6JQN1 1059 aa18.94■□□□□ 0.62
COL7A1-209ENST00000474432 CCNI2Q6ZMN8 369 aaPredicted RBP18.94■□□□□ 0.62
COL7A1-209ENST00000474432 MCOLN2Q8IZK6 566 aa18.94■□□□□ 0.62
COL7A1-209ENST00000474432 PCDH20Q8N6Y1 951 aaKnown RBP18.94■□□□□ 0.62
COL7A1-209ENST00000474432 GRIN3AQ8TCU5 1115 aa18.94■□□□□ 0.62
COL7A1-209ENST00000474432 CCDC114Q96M63 670 aa18.94■□□□□ 0.62
COL7A1-209ENST00000474432 FUCA2Q9BTY2 467 aa18.94■□□□□ 0.62
COL7A1-209ENST00000474432 HDAC8Q9BY41 377 aa18.94■□□□□ 0.62
COL7A1-209ENST00000474432 RETREG1Q9H6L5 497 aa18.94■□□□□ 0.62
COL7A1-209ENST00000474432 ERVMER34-1Q9H9K5 563 aa18.94■□□□□ 0.62
COL7A1-209ENST00000474432 GDF3Q9NR23 364 aa18.94■□□□□ 0.62
COL7A1-209ENST00000474432 FARP1Q9Y4F1 1045 aaPredicted RBP18.94■□□□□ 0.62
COL7A1-209ENST00000474432 TRPM6Q9BX84 2022 aa18.94■□□□□ 0.62
COL7A1-209ENST00000474432 DMXL2Q8TDJ6 3036 aa18.93■□□□□ 0.62
COL7A1-209ENST00000474432 A0A1W2PQU0 124 aa18.93■□□□□ 0.62
COL7A1-209ENST00000474432 TMEM8BA6NDV4 472 aa18.93■□□□□ 0.62
COL7A1-209ENST00000474432 TNFSF14O43557 240 aa18.93■□□□□ 0.62
COL7A1-209ENST00000474432 BNIP3Q12983 259 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms