RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 EPHB6O15197 1021 aa20.8■□□□□ 0.92
PDLIM4-206ENST00000474421 SMAD6O43541 496 aaKnown RBP20.8■□□□□ 0.92
PDLIM4-206ENST00000474421 CTSLP07711 333 aa20.8■□□□□ 0.92
PDLIM4-206ENST00000474421 UNGP13051 313 aaPredicted RBP20.8■□□□□ 0.92
PDLIM4-206ENST00000474421 CDK11BP21127 795 aaKnown RBP20.8■□□□□ 0.92
PDLIM4-206ENST00000474421 RXRGP48443 463 aa20.8■□□□□ 0.92
PDLIM4-206ENST00000474421 SERPINH1P50454 418 aaKnown RBP20.8■□□□□ 0.92
PDLIM4-206ENST00000474421 GSCP56915 257 aaPredicted RBP20.8■□□□□ 0.92
PDLIM4-206ENST00000474421 SCAPQ12770 1279 aa20.8■□□□□ 0.92
PDLIM4-206ENST00000474421 CDO1Q16878 200 aa20.8■□□□□ 0.92
PDLIM4-206ENST00000474421 CCDC14Q49A88 953 aa20.8■□□□□ 0.92
PDLIM4-206ENST00000474421 PRAMEF14Q5SWL7 426 aa20.8■□□□□ 0.92
PDLIM4-206ENST00000474421 ARTNQ5T4W7 220 aa20.8■□□□□ 0.92
PDLIM4-206ENST00000474421 PCDH20Q8N6Y1 951 aaKnown RBP20.8■□□□□ 0.92
PDLIM4-206ENST00000474421 HDAC8Q9BY41 377 aa20.8■□□□□ 0.92
PDLIM4-206ENST00000474421 ADAM22Q9P0K1 906 aa20.8■□□□□ 0.92
PDLIM4-206ENST00000474421 FREM2Q5SZK8 3169 aa20.8■□□□□ 0.92
PDLIM4-206ENST00000474421 FAM208BQ5VWN6 2430 aa20.79■□□□□ 0.92
PDLIM4-206ENST00000474421 LRRC10BA6NIK2 292 aa20.79■□□□□ 0.92
PDLIM4-206ENST00000474421 CALB1P05937 261 aa20.79■□□□□ 0.92
PDLIM4-206ENST00000474421 CDK4P11802 303 aa20.79■□□□□ 0.92
PDLIM4-206ENST00000474421 KRT3P12035 628 aa20.79■□□□□ 0.92
PDLIM4-206ENST00000474421 EPHA8P29322 1005 aaPredicted RBP20.79■□□□□ 0.92
PDLIM4-206ENST00000474421 MAPKAPK2P49137 400 aa20.79■□□□□ 0.92
PDLIM4-206ENST00000474421 GEMIN4P57678 1058 aaKnown RBP20.79■□□□□ 0.92
PDLIM4-206ENST00000474421 TAS2R38P59533 333 aa20.79■□□□□ 0.92
PDLIM4-206ENST00000474421 UBXN1Q04323 297 aa20.79■□□□□ 0.92
PDLIM4-206ENST00000474421 SHBQ15464 509 aa20.79■□□□□ 0.92
PDLIM4-206ENST00000474421 C15orf59Q2T9L4 293 aaPredicted RBP20.79■□□□□ 0.92
PDLIM4-206ENST00000474421 ERN2Q76MJ5 926 aaKnown RBP20.79■□□□□ 0.92
PDLIM4-206ENST00000474421 PHF13Q86YI8 300 aaPredicted RBP20.79■□□□□ 0.92
PDLIM4-206ENST00000474421 GATAD2AQ86YP4 633 aa20.79■□□□□ 0.92
PDLIM4-206ENST00000474421 DRC7Q8IY82 874 aa20.79■□□□□ 0.92
PDLIM4-206ENST00000474421 ERGIC2Q96RQ1 377 aa20.79■□□□□ 0.92
PDLIM4-206ENST00000474421 PCDHGA1Q9Y5H4 931 aa20.79■□□□□ 0.92
PDLIM4-206ENST00000474421 CHD5Q8TDI0 1954 aa20.78■□□□□ 0.92
PDLIM4-206ENST00000474421 ZMPSTE24O75844 475 aa20.78■□□□□ 0.92
PDLIM4-206ENST00000474421 LDOC1O95751 146 aaPredicted RBP20.78■□□□□ 0.92
PDLIM4-206ENST00000474421 MBD3O95983 291 aa20.78■□□□□ 0.92
PDLIM4-206ENST00000474421 C1SP09871 688 aa20.78■□□□□ 0.92
PDLIM4-206ENST00000474421 CCDC172P0C7W6 258 aa20.78■□□□□ 0.92
PDLIM4-206ENST00000474421 RHOQP17081 205 aa20.78■□□□□ 0.92
PDLIM4-206ENST00000474421 GLDCP23378 1020 aa20.78■□□□□ 0.92
PDLIM4-206ENST00000474421 CLEC16AQ2KHT3 1053 aa20.78■□□□□ 0.92
PDLIM4-206ENST00000474421 ARSIQ5FYB1 569 aa20.78■□□□□ 0.92
PDLIM4-206ENST00000474421 RWDD4Q6NW29 188 aaKnown RBP20.78■□□□□ 0.92
PDLIM4-206ENST00000474421 DPY19L3Q6ZPD9 716 aa20.78■□□□□ 0.92
PDLIM4-206ENST00000474421 PHLDB2Q86SQ0 1253 aa20.78■□□□□ 0.92
PDLIM4-206ENST00000474421 HORMAD1Q86X24 394 aa20.78■□□□□ 0.92
PDLIM4-206ENST00000474421 CHST14Q8NCH0 376 aa20.78■□□□□ 0.92
PDLIM4-206ENST00000474421 GRIN3AQ8TCU5 1115 aa20.78■□□□□ 0.92
PDLIM4-206ENST00000474421 CENPIQ92674 756 aaPredicted RBP20.78■□□□□ 0.92
PDLIM4-206ENST00000474421 ARRDC3Q96B67 414 aa20.78■□□□□ 0.92
PDLIM4-206ENST00000474421 KLHDC7BQ96G42 594 aa20.78■□□□□ 0.92
PDLIM4-206ENST00000474421 SELENOOQ9BVL4 669 aa20.78■□□□□ 0.92
PDLIM4-206ENST00000474421 TNKS2Q9H2K2 1166 aa20.78■□□□□ 0.92
PDLIM4-206ENST00000474421 CCDC86Q9H6F5 360 aaKnown RBP20.78■□□□□ 0.92
PDLIM4-206ENST00000474421 HPCAL4Q9UM19 191 aa20.78■□□□□ 0.92
PDLIM4-206ENST00000474421 KNTC1P50748 2209 aa20.78■□□□□ 0.92
PDLIM4-206ENST00000474421 ANKRD11Q6UB99 2663 aaPredicted RBP20.77■□□□□ 0.92
PDLIM4-206ENST00000474421 A0A1W2PQU0 124 aa20.77■□□□□ 0.92
PDLIM4-206ENST00000474421 ANKRD62A6NC57 917 aa20.77■□□□□ 0.92
PDLIM4-206ENST00000474421 ENC1O14682 589 aa20.77■□□□□ 0.92
PDLIM4-206ENST00000474421 LEFTY1O75610 366 aa20.77■□□□□ 0.92
PDLIM4-206ENST00000474421 CAPNS1P04632 268 aa20.77■□□□□ 0.92
PDLIM4-206ENST00000474421 PTP4A2Q12974 167 aa20.77■□□□□ 0.92
PDLIM4-206ENST00000474421 CARD16Q5EG05 197 aa20.77■□□□□ 0.92
PDLIM4-206ENST00000474421 CCDC183Q5T5S1 534 aa20.77■□□□□ 0.92
PDLIM4-206ENST00000474421 MANEALQ5VSG8 457 aa20.77■□□□□ 0.92
PDLIM4-206ENST00000474421 PROSER1Q86XN7 944 aa20.77■□□□□ 0.92
PDLIM4-206ENST00000474421 PLPP6Q8IY26 295 aa20.77■□□□□ 0.92
PDLIM4-206ENST00000474421 C3orf20Q8ND61 904 aa20.77■□□□□ 0.92
PDLIM4-206ENST00000474421 JOSD2Q8TAC2 188 aa20.77■□□□□ 0.92
PDLIM4-206ENST00000474421 FAM172AQ8WUF8 416 aa20.77■□□□□ 0.92
PDLIM4-206ENST00000474421 NTAN1Q96AB6 310 aa20.77■□□□□ 0.92
PDLIM4-206ENST00000474421 ISG20Q96AZ6 181 aaKnown RBP20.77■□□□□ 0.92
PDLIM4-206ENST00000474421 TBC1D31Q96DN5 1066 aa20.77■□□□□ 0.92
PDLIM4-206ENST00000474421 CNDP2Q96KP4 475 aaKnown RBP20.77■□□□□ 0.92
PDLIM4-206ENST00000474421 PCDHB18PQ96TA0 734 aa20.77■□□□□ 0.92
PDLIM4-206ENST00000474421 HEPHQ9BQS7 1158 aa20.77■□□□□ 0.92
PDLIM4-206ENST00000474421 SEPT11Q9NVA2 429 aaKnown RBP20.77■□□□□ 0.92
PDLIM4-206ENST00000474421 TRPM6Q9BX84 2022 aa20.77■□□□□ 0.91
PDLIM4-206ENST00000474421 PKD1L2Q7Z442 2459 aa20.76■□□□□ 0.91
PDLIM4-206ENST00000474421 ZNF821O75541 412 aaPredicted RBP20.76■□□□□ 0.91
PDLIM4-206ENST00000474421 PCDH8O95206 1070 aa20.76■□□□□ 0.91
PDLIM4-206ENST00000474421 PLEKP08567 350 aaPredicted RBP20.76■□□□□ 0.91
PDLIM4-206ENST00000474421 GPD1P21695 349 aa20.76■□□□□ 0.91
PDLIM4-206ENST00000474421 ITGB7P26010 798 aa20.76■□□□□ 0.91
PDLIM4-206ENST00000474421 AKT2P31751 481 aa20.76■□□□□ 0.91
PDLIM4-206ENST00000474421 DNA2P51530 1060 aa20.76■□□□□ 0.91
PDLIM4-206ENST00000474421 NEK3P51956 506 aa20.76■□□□□ 0.91
PDLIM4-206ENST00000474421 ARF5P84085 180 aa20.76■□□□□ 0.91
PDLIM4-206ENST00000474421 C1QBPQ07021 282 aaKnown RBP20.76■□□□□ 0.91
PDLIM4-206ENST00000474421 SMAD1Q15797 465 aaKnown RBP20.76■□□□□ 0.91
PDLIM4-206ENST00000474421 CCDC157Q569K6 752 aa20.76■□□□□ 0.91
PDLIM4-206ENST00000474421 ZSCAN30Q86W11 494 aa20.76■□□□□ 0.91
PDLIM4-206ENST00000474421 NLRP14Q86W24 1093 aa20.76■□□□□ 0.91
PDLIM4-206ENST00000474421 SPATS2Q86XZ4 545 aaKnown RBP20.76■□□□□ 0.91
PDLIM4-206ENST00000474421 EID2Q8N6I1 236 aa20.76■□□□□ 0.91
PDLIM4-206ENST00000474421 TMEM145Q8NBT3 493 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms