RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 TMEM248Q9NWD8 314 aa4.53□□□□□ -1.68
BRCA1-212ENST00000473961 ZDHHC7Q9NXF8 308 aa4.53□□□□□ -1.68
BRCA1-212ENST00000473961 UPB1Q9UBR1 384 aa4.53□□□□□ -1.68
BRCA1-212ENST00000473961 ZNF215Q9UL58 517 aaPredicted RBP4.53□□□□□ -1.68
BRCA1-212ENST00000473961 ST3GAL5Q9UNP4 418 aa4.53□□□□□ -1.68
BRCA1-212ENST00000473961 PASKQ96RG2 1323 aa4.52□□□□□ -1.69
BRCA1-212ENST00000473961 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.52□□□□□ -1.69
BRCA1-212ENST00000473961 LIPT2A6NK58 231 aa4.52□□□□□ -1.69
BRCA1-212ENST00000473961 PLSCR1O15162 318 aa4.52□□□□□ -1.69
BRCA1-212ENST00000473961 CBX6O95503 412 aa4.52□□□□□ -1.69
BRCA1-212ENST00000473961 MLYCDO95822 493 aa4.52□□□□□ -1.69
BRCA1-212ENST00000473961 IL1AP01583 271 aa4.52□□□□□ -1.69
BRCA1-212ENST00000473961 EIF2S1P05198 315 aaKnown RBP4.52□□□□□ -1.69
BRCA1-212ENST00000473961 GALTP07902 379 aa4.52□□□□□ -1.69
BRCA1-212ENST00000473961 RFPL3SP0C7P2 107 aa4.52□□□□□ -1.69
BRCA1-212ENST00000473961 TYK2P29597 1187 aa4.52□□□□□ -1.69
BRCA1-212ENST00000473961 MPLP40238 635 aa4.52□□□□□ -1.69
BRCA1-212ENST00000473961 NLRP5P59047 1200 aa4.52□□□□□ -1.69
BRCA1-212ENST00000473961 NANOS3P60323 173 aaKnown RBP4.52□□□□□ -1.69
BRCA1-212ENST00000473961 GALNT3Q14435 633 aa4.52□□□□□ -1.69
BRCA1-212ENST00000473961 KPNB1Q14974 876 aaKnown RBP4.52□□□□□ -1.69
BRCA1-212ENST00000473961 TAF11Q15544 211 aa4.52□□□□□ -1.69
BRCA1-212ENST00000473961 CCDC96Q2M329 555 aa4.52□□□□□ -1.69
BRCA1-212ENST00000473961 DUSP28Q4G0W2 176 aa4.52□□□□□ -1.69
BRCA1-212ENST00000473961 SLC9B1Q4ZJI4 515 aa4.52□□□□□ -1.69
BRCA1-212ENST00000473961 PLEKHS1Q5SXH7 462 aa4.52□□□□□ -1.69
BRCA1-212ENST00000473961 VWA5B1Q5TIE3 1220 aa4.52□□□□□ -1.69
BRCA1-212ENST00000473961 Q6YL49 198 aa4.52□□□□□ -1.69
BRCA1-212ENST00000473961 PRSS45Q7RTY3 260 aa4.52□□□□□ -1.69
BRCA1-212ENST00000473961 RNF144BQ7Z419 303 aa4.52□□□□□ -1.69
BRCA1-212ENST00000473961 KRT77Q7Z794 578 aa4.52□□□□□ -1.69
BRCA1-212ENST00000473961 IGFN1Q86VF2 1251 aa4.52□□□□□ -1.69
BRCA1-212ENST00000473961 PAQR4Q8N4S7 273 aaPredicted RBP4.52□□□□□ -1.69
BRCA1-212ENST00000473961 CADM4Q8NFZ8 388 aa4.52□□□□□ -1.69
BRCA1-212ENST00000473961 INTS12Q96CB8 462 aaKnown RBP4.52□□□□□ -1.69
BRCA1-212ENST00000473961 CHFRQ96EP1 664 aa4.52□□□□□ -1.69
BRCA1-212ENST00000473961 ZNF503Q96F45 646 aa4.52□□□□□ -1.69
BRCA1-212ENST00000473961 P2RY11Q96G91 374 aa4.52□□□□□ -1.69
BRCA1-212ENST00000473961 PDLIM2Q96JY6 352 aa4.52□□□□□ -1.69
BRCA1-212ENST00000473961 BBC3Q96PG8 261 aaPredicted RBP4.52□□□□□ -1.69
BRCA1-212ENST00000473961 FTOQ9C0B1 505 aaKnown RBP eCLIP4.52□□□□□ -1.69
BRCA1-212ENST00000473961 SYBUQ9NX95 663 aa4.52□□□□□ -1.69
BRCA1-212ENST00000473961 KIAA1456Q9P272 454 aa4.52□□□□□ -1.69
BRCA1-212ENST00000473961 SLC17A6Q9P2U8 582 aa4.52□□□□□ -1.69
BRCA1-212ENST00000473961 CFDP1Q9UEE9 299 aaPredicted RBP4.52□□□□□ -1.69
BRCA1-212ENST00000473961 CORO1CQ9ULV4 474 aaPredicted RBP4.52□□□□□ -1.69
BRCA1-212ENST00000473961 MTMR6Q9Y217 621 aa4.52□□□□□ -1.69
BRCA1-212ENST00000473961 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.51□□□□□ -1.69
BRCA1-212ENST00000473961 PABPN1LA6NDY0 278 aaKnown RBP4.51□□□□□ -1.69
BRCA1-212ENST00000473961 TMEM191CA6NGB0 347 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 KCNJ18B7U540 433 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 MSI1O43347 362 aaKnown RBP4.51□□□□□ -1.69
BRCA1-212ENST00000473961 SERPINC1P01008 464 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 LCKP06239 509 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 HNRNPCP07910 306 aaKnown RBP eCLIP4.51□□□□□ -1.69
BRCA1-212ENST00000473961 FCGR2AP12318 317 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 ACTN2P35609 894 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 NNMTP40261 264 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 RGS2P41220 211 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 LMAN1P49257 510 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 CLK3P49761 638 aaKnown RBP4.51□□□□□ -1.69
BRCA1-212ENST00000473961 SLC14A1Q13336 389 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 ZNF169Q14929 603 aaPredicted RBP4.51□□□□□ -1.69
BRCA1-212ENST00000473961 VEPH1Q14D04 833 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 HIST2H2ACQ16777 129 aaPredicted RBP4.51□□□□□ -1.69
BRCA1-212ENST00000473961 TSTD2Q5T7W7 516 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 SERTAD4-AS1Q5TG53 156 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 ZKSCAN2Q63HK3 967 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 GPR139Q6DWJ6 353 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 SUMO4Q6EEV6 95 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 SLC30A6Q6NXT4 461 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 C17orf99Q6UX52 265 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 LRIG3Q6UXM1 1119 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 FAM83HQ6ZRV2 1179 aaPredicted RBP4.51□□□□□ -1.69
BRCA1-212ENST00000473961 SZRD1Q7Z422 152 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 MDGA2Q7Z553 956 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 PRPF39Q86UA1 669 aaKnown RBP4.51□□□□□ -1.69
BRCA1-212ENST00000473961 FAM160B2Q86V87 743 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 RASAL3Q86YV0 1011 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 TICAM1Q8IUC6 712 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 TEX11Q8IYF3 940 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 ADGRF2Q8IZF7 708 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 C17orf53Q8N3J3 647 aaPredicted RBP4.51□□□□□ -1.69
BRCA1-212ENST00000473961 PLD5Q8N7P1 536 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 SETD9Q8NE22 299 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 PIGKQ92643 395 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 SLF1Q9BQI6 1058 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 CLSTN3Q9BQT9 956 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 AP1M1Q9BXS5 423 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 SLC32A1Q9H598 525 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 TXNRD2Q9NNW7 524 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 PCDHB16Q9NRJ7 776 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.51□□□□□ -1.69
BRCA1-212ENST00000473961 ASIC5Q9NY37 505 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 NCKIPSDQ9NZQ3 722 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 CHORDC1Q9UHD1 332 aaPredicted RBP4.51□□□□□ -1.69
BRCA1-212ENST00000473961 RPS6KA6Q9UK32 745 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.51□□□□□ -1.69
BRCA1-212ENST00000473961 PCDHGB5Q9Y5G0 923 aa4.51□□□□□ -1.69
BRCA1-212ENST00000473961 CLDN16Q9Y5I7 305 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms