RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 RLN3Q8WXF3 142 aa12.65□□□□□ -0.38
DDX56-209ENST00000473924 KRT35Q92764 455 aa12.65□□□□□ -0.38
DDX56-209ENST00000473924 ALS2CR12Q96Q35 445 aa12.65□□□□□ -0.38
DDX56-209ENST00000473924 TM6SF2Q9BZW4 377 aa12.65□□□□□ -0.38
DDX56-209ENST00000473924 RSPH9Q9H1X1 276 aaPredicted RBP12.65□□□□□ -0.38
DDX56-209ENST00000473924 IPO11Q9UI26 975 aaKnown RBP12.65□□□□□ -0.38
DDX56-209ENST00000473924 RAB23Q9ULC3 237 aa12.65□□□□□ -0.38
DDX56-209ENST00000473924 CYP8B1Q9UNU6 501 aa12.65□□□□□ -0.38
DDX56-209ENST00000473924 PCDHA3Q9Y5H8 950 aa12.65□□□□□ -0.38
DDX56-209ENST00000473924 CAPN6Q9Y6Q1 641 aa12.65□□□□□ -0.38
DDX56-209ENST00000473924 NUP205Q92621 2012 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 MIF4GDA9UHW6 222 aaKnown RBP12.64□□□□□ -0.39
DDX56-209ENST00000473924 APOL1O14791 398 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 MCF2LO15068 1137 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 ALOX15BO15296 676 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 MAP3K13O43283 966 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 HRO43593 1189 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 MFSD11O43934 449 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 LILRB5O75023 590 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 TMCC1O94876 653 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 FTCDO95954 541 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 CD160O95971 181 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 CTNNA2P26232 953 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 CETN2P41208 172 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 P2RY2P41231 377 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 NBL1P41271 181 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 PSMD8P48556 350 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 RWDD2BP57060 319 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 RHOAP61586 193 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 SNRPD1P62314 119 aaKnown RBP12.64□□□□□ -0.39
DDX56-209ENST00000473924 DYNLT1P63172 113 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 NHLH1Q02575 133 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 ZBTB16Q05516 673 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 IL10RBQ08334 325 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 SFSWAPQ12872 951 aaKnown RBP12.64□□□□□ -0.39
DDX56-209ENST00000473924 TFDP2Q14188 446 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 CST6Q15828 149 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 CARD16Q5EG05 197 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 TFDP3Q5H9I0 405 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 SPOCD1Q6ZMY3 1216 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 ARHGAP36Q6ZRI8 547 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 ZNF662Q6ZS27 426 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 NT5DC3Q86UY8 548 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 C11orf74Q86VG3 221 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 TP53INP2Q8IXH6 220 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 PQLC3Q8N755 202 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 OR2A12Q8NGT7 310 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 EXD1Q8NHP7 514 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 NSMCE1Q8WV22 266 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 ISG20Q96AZ6 181 aaKnown RBP12.64□□□□□ -0.39
DDX56-209ENST00000473924 FAM129BQ96TA1 746 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 KCNF1Q9H3M0 494 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 PDFQ9HBH1 243 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 ITM2CQ9NQX7 267 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 SCML1Q9UN30 329 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 NCKAP1Q9Y2A7 1128 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 HEY1Q9Y5J3 304 aa12.64□□□□□ -0.39
DDX56-209ENST00000473924 WDFY4Q6ZS81 3184 aa12.63□□□□□ -0.39
DDX56-209ENST00000473924 C1QTNF3-AMACRE9PGA6 284 aa12.63□□□□□ -0.39
DDX56-209ENST00000473924 ZSCAN12O43309 604 aa12.63□□□□□ -0.39
DDX56-209ENST00000473924 NDUFS2O75306 463 aa12.63□□□□□ -0.39
DDX56-209ENST00000473924 MAP3K6O95382 1288 aa12.63□□□□□ -0.39
DDX56-209ENST00000473924 ADH1BP00325 375 aa12.63□□□□□ -0.39
DDX56-209ENST00000473924 KRT10P13645 584 aa12.63□□□□□ -0.39
DDX56-209ENST00000473924 MX2P20592 715 aa12.63□□□□□ -0.39
DDX56-209ENST00000473924 CHRNA3P32297 505 aa12.63□□□□□ -0.39
DDX56-209ENST00000473924 SLC8A1P32418 973 aa12.63□□□□□ -0.39
DDX56-209ENST00000473924 CDKN2BP42772 138 aa12.63□□□□□ -0.39
DDX56-209ENST00000473924 TPMTP51580 245 aa12.63□□□□□ -0.39
DDX56-209ENST00000473924 COPS2P61201 443 aa12.63□□□□□ -0.39
DDX56-209ENST00000473924 LLGL1Q15334 1064 aa12.63□□□□□ -0.39
DDX56-209ENST00000473924 MAP7D1Q3KQU3 841 aa12.63□□□□□ -0.39
DDX56-209ENST00000473924 FAM46CQ5VWP2 391 aa12.63□□□□□ -0.39
DDX56-209ENST00000473924 SLC9A4Q6AI14 798 aa12.63□□□□□ -0.39
DDX56-209ENST00000473924 DPY19L3Q6ZPD9 716 aa12.63□□□□□ -0.39
DDX56-209ENST00000473924 FAM124AQ86V42 546 aa12.63□□□□□ -0.39
DDX56-209ENST00000473924 LRRC49Q8IUZ0 686 aa12.63□□□□□ -0.39
DDX56-209ENST00000473924 FAM160A2Q8N612 972 aaPredicted RBP12.63□□□□□ -0.39
DDX56-209ENST00000473924 OR2AP1Q8NGE2 309 aa12.63□□□□□ -0.39
DDX56-209ENST00000473924 GDAP1L1Q96MZ0 367 aa12.63□□□□□ -0.39
DDX56-209ENST00000473924 OMDQ99983 421 aa12.63□□□□□ -0.39
DDX56-209ENST00000473924 HEPHQ9BQS7 1158 aa12.63□□□□□ -0.39
DDX56-209ENST00000473924 CINPQ9BW66 212 aaPredicted RBP12.63□□□□□ -0.39
DDX56-209ENST00000473924 SEMA4AQ9H3S1 761 aa12.63□□□□□ -0.39
DDX56-209ENST00000473924 ZDHHC6Q9H6R6 413 aa12.63□□□□□ -0.39
DDX56-209ENST00000473924 USP36Q9P275 1121 aaKnown RBP12.63□□□□□ -0.39
DDX56-209ENST00000473924 HECAQ9UBI9 543 aaPredicted RBP12.63□□□□□ -0.39
DDX56-209ENST00000473924 IL36AQ9UHA7 158 aa12.63□□□□□ -0.39
DDX56-209ENST00000473924 PACSIN2Q9UNF0 486 aaPredicted RBP12.63□□□□□ -0.39
DDX56-209ENST00000473924 MUC6Q6W4X9 2439 aa12.63□□□□□ -0.39
DDX56-209ENST00000473924 NYNRINQ9P2P1 1898 aaKnown RBP12.63□□□□□ -0.39
DDX56-209ENST00000473924 IGHV1OR15-9A0A0B4J2B8 117 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 KPNA3O00505 521 aaPredicted RBP12.62□□□□□ -0.39
DDX56-209ENST00000473924 KRIT1O00522 736 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 MID1O15344 667 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 MAFKO60675 156 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 CST8O60676 142 aa12.62□□□□□ -0.39
DDX56-209ENST00000473924 ZNF821O75541 412 aaPredicted RBP12.62□□□□□ -0.39
DDX56-209ENST00000473924 RNASEH2AO75792 299 aaKnown RBP12.62□□□□□ -0.39
DDX56-209ENST00000473924 NEBLO76041 1014 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms