RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 LMX1AQ8TE12 382 aa10.34□□□□□ -0.75
SCAMP3-205ENST00000472397 KCNE4Q8WWG9 221 aa10.34□□□□□ -0.75
SCAMP3-205ENST00000472397 PPP1R13BQ96KQ4 1090 aa10.34□□□□□ -0.75
SCAMP3-205ENST00000472397 BMFQ96LC9 184 aa10.34□□□□□ -0.75
SCAMP3-205ENST00000472397 CEP63Q96MT8 703 aa10.34□□□□□ -0.75
SCAMP3-205ENST00000472397 MED15Q96RN5 788 aa10.34□□□□□ -0.75
SCAMP3-205ENST00000472397 IRX2Q9BZI1 471 aaPredicted RBP10.34□□□□□ -0.75
SCAMP3-205ENST00000472397 TRIM4Q9C037 500 aa10.34□□□□□ -0.75
SCAMP3-205ENST00000472397 TKTL2Q9H0I9 626 aa10.34□□□□□ -0.75
SCAMP3-205ENST00000472397 DYRK4Q9NR20 520 aa10.34□□□□□ -0.75
SCAMP3-205ENST00000472397 PIGVQ9NUD9 493 aa10.34□□□□□ -0.75
SCAMP3-205ENST00000472397 IPO11Q9UI26 975 aaKnown RBP10.34□□□□□ -0.75
SCAMP3-205ENST00000472397 KLF15Q9UIH9 416 aa10.34□□□□□ -0.75
SCAMP3-205ENST00000472397 FCF1Q9Y324 198 aaKnown RBP10.34□□□□□ -0.75
SCAMP3-205ENST00000472397 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.34□□□□□ -0.75
SCAMP3-205ENST00000472397 U3KQA8 63 aa10.34□□□□□ -0.75
SCAMP3-205ENST00000472397 J3QKU1 62 aa10.33□□□□□ -0.76
SCAMP3-205ENST00000472397 SLC7A4O43246 635 aa10.33□□□□□ -0.76
SCAMP3-205ENST00000472397 SART1O43290 800 aaKnown RBP10.33□□□□□ -0.76
SCAMP3-205ENST00000472397 MAGEC1O60732 1142 aa10.33□□□□□ -0.76
SCAMP3-205ENST00000472397 LEFTY1O75610 366 aa10.33□□□□□ -0.76
SCAMP3-205ENST00000472397 CKMT1AP12532 417 aa10.33□□□□□ -0.76
SCAMP3-205ENST00000472397 HNRNPA2B1P22626 353 aaKnown RBP10.33□□□□□ -0.76
SCAMP3-205ENST00000472397 PCBP4P57723 403 aaKnown RBP10.33□□□□□ -0.76
SCAMP3-205ENST00000472397 NFKB2Q00653 900 aa10.33□□□□□ -0.76
SCAMP3-205ENST00000472397 GCNT1Q02742 428 aa10.33□□□□□ -0.76
SCAMP3-205ENST00000472397 EIF4EBP2Q13542 120 aaPredicted RBP10.33□□□□□ -0.76
SCAMP3-205ENST00000472397 SLC12A1Q13621 1099 aa10.33□□□□□ -0.76
SCAMP3-205ENST00000472397 FZD2Q14332 565 aa10.33□□□□□ -0.76
SCAMP3-205ENST00000472397 RAB6CQ53S08 254 aa10.33□□□□□ -0.76
SCAMP3-205ENST00000472397 PERM1Q5SV97 790 aa10.33□□□□□ -0.76
SCAMP3-205ENST00000472397 BROXQ5VW32 411 aa10.33□□□□□ -0.76
SCAMP3-205ENST00000472397 CDCP2Q5VXM1 449 aa10.33□□□□□ -0.76
SCAMP3-205ENST00000472397 DPY19L3Q6ZPD9 716 aa10.33□□□□□ -0.76
SCAMP3-205ENST00000472397 IQCHQ86VS3 1027 aa10.33□□□□□ -0.76
SCAMP3-205ENST00000472397 TRIM59Q8IWR1 403 aa10.33□□□□□ -0.76
SCAMP3-205ENST00000472397 FAM181AQ8N9Y4 354 aa10.33□□□□□ -0.76
SCAMP3-205ENST00000472397 TMEM145Q8NBT3 493 aa10.33□□□□□ -0.76
SCAMP3-205ENST00000472397 ZNF248Q8NDW4 579 aa10.33□□□□□ -0.76
SCAMP3-205ENST00000472397 RFFLQ8WZ73 363 aa10.33□□□□□ -0.76
SCAMP3-205ENST00000472397 CCDC34Q96HJ3 373 aa10.33□□□□□ -0.76
SCAMP3-205ENST00000472397 DHTKD1Q96HY7 919 aaPredicted RBP10.33□□□□□ -0.76
SCAMP3-205ENST00000472397 DEPDC7Q96QD5 511 aa10.33□□□□□ -0.76
SCAMP3-205ENST00000472397 SLC2A13Q96QE2 648 aa10.33□□□□□ -0.76
SCAMP3-205ENST00000472397 MAGEB5Q9BZ81 275 aa10.33□□□□□ -0.76
SCAMP3-205ENST00000472397 TM6SF2Q9BZW4 377 aa10.33□□□□□ -0.76
SCAMP3-205ENST00000472397 RAB6CQ9H0N0 254 aa10.33□□□□□ -0.76
SCAMP3-205ENST00000472397 SYNCQ9H7C4 482 aa10.33□□□□□ -0.76
SCAMP3-205ENST00000472397 PREBQ9HCU5 417 aa10.33□□□□□ -0.76
SCAMP3-205ENST00000472397 IL36AQ9UHA7 158 aa10.33□□□□□ -0.76
SCAMP3-205ENST00000472397 ZNF462Q96JM2 2506 aa10.33□□□□□ -0.76
SCAMP3-205ENST00000472397 TEX51A0A1B0GUA7 166 aa10.32□□□□□ -0.76
SCAMP3-205ENST00000472397 IGLON5A6NGN9 336 aa10.32□□□□□ -0.76
SCAMP3-205ENST00000472397 GOLGA8SH3BPF8 625 aa10.32□□□□□ -0.76
SCAMP3-205ENST00000472397 MUSKO15146 869 aa10.32□□□□□ -0.76
SCAMP3-205ENST00000472397 SPINT1O43278 529 aa10.32□□□□□ -0.76
SCAMP3-205ENST00000472397 GADD45BO75293 160 aaPredicted RBP10.32□□□□□ -0.76
SCAMP3-205ENST00000472397 CELA2BP08218 269 aaPredicted RBP10.32□□□□□ -0.76
SCAMP3-205ENST00000472397 ALPPL2P10696 532 aa10.32□□□□□ -0.76
SCAMP3-205ENST00000472397 CDK4P11802 303 aa10.32□□□□□ -0.76
SCAMP3-205ENST00000472397 ABL2P42684 1182 aa10.32□□□□□ -0.76
SCAMP3-205ENST00000472397 ADKP55263 362 aaKnown RBP10.32□□□□□ -0.76
SCAMP3-205ENST00000472397 TMPRSS3P57727 454 aa10.32□□□□□ -0.76
SCAMP3-205ENST00000472397 PDE1CQ14123 709 aaPredicted RBP10.32□□□□□ -0.76
SCAMP3-205ENST00000472397 ZSCAN23Q3MJ62 389 aa10.32□□□□□ -0.76
SCAMP3-205ENST00000472397 PTPN20Q4JDL3 420 aa10.32□□□□□ -0.76
SCAMP3-205ENST00000472397 COBLL1Q53SF7 1204 aa10.32□□□□□ -0.76
SCAMP3-205ENST00000472397 TAF3Q5VWG9 929 aa10.32□□□□□ -0.76
SCAMP3-205ENST00000472397 C22orf39Q6P5X5 142 aa10.32□□□□□ -0.76
SCAMP3-205ENST00000472397 C11orf57Q6ZUT1 292 aaPredicted RBP10.32□□□□□ -0.76
SCAMP3-205ENST00000472397 ERN2Q76MJ5 926 aaKnown RBP10.32□□□□□ -0.76
SCAMP3-205ENST00000472397 DRC7Q8IY82 874 aa10.32□□□□□ -0.76
SCAMP3-205ENST00000472397 FAM131CQ96AQ9 280 aa10.32□□□□□ -0.76
SCAMP3-205ENST00000472397 HIC2Q96JB3 615 aa10.32□□□□□ -0.76
SCAMP3-205ENST00000472397 TBCBQ99426 244 aa10.32□□□□□ -0.76
SCAMP3-205ENST00000472397 KDM4CQ9H3R0 1056 aa10.32□□□□□ -0.76
SCAMP3-205ENST00000472397 ZDHHC6Q9H6R6 413 aa10.32□□□□□ -0.76
SCAMP3-205ENST00000472397 SIRPGQ9P1W8 387 aa10.32□□□□□ -0.76
SCAMP3-205ENST00000472397 CNTN6Q9UQ52 1028 aa10.32□□□□□ -0.76
SCAMP3-205ENST00000472397 FARP1Q9Y4F1 1045 aaPredicted RBP10.32□□□□□ -0.76
SCAMP3-205ENST00000472397 WASF2Q9Y6W5 498 aa10.32□□□□□ -0.76
SCAMP3-205ENST00000472397 TK2O00142 265 aa10.31□□□□□ -0.76
SCAMP3-205ENST00000472397 HSF2BPO75031 334 aa10.31□□□□□ -0.76
SCAMP3-205ENST00000472397 CLDN11O75508 207 aa10.31□□□□□ -0.76
SCAMP3-205ENST00000472397 DAB1O75553 588 aa10.31□□□□□ -0.76
SCAMP3-205ENST00000472397 GJB6O95452 261 aa10.31□□□□□ -0.76
SCAMP3-205ENST00000472397 JUNDP17535 347 aa10.31□□□□□ -0.76
SCAMP3-205ENST00000472397 RBMS1P29558 406 aaKnown RBP10.31□□□□□ -0.76
SCAMP3-205ENST00000472397 ACVRL1P37023 503 aa10.31□□□□□ -0.76
SCAMP3-205ENST00000472397 CDH4P55283 916 aa10.31□□□□□ -0.76
SCAMP3-205ENST00000472397 KRT83P78385 493 aa10.31□□□□□ -0.76
SCAMP3-205ENST00000472397 SLC6A3Q01959 620 aa10.31□□□□□ -0.76
SCAMP3-205ENST00000472397 DEUP1Q05D60 604 aa10.31□□□□□ -0.76
SCAMP3-205ENST00000472397 ISXQ2M1V0 245 aa10.31□□□□□ -0.76
SCAMP3-205ENST00000472397 HSP90AA4PQ58FG1 418 aa10.31□□□□□ -0.76
SCAMP3-205ENST00000472397 EFHC1Q5JVL4 640 aa10.31□□□□□ -0.76
SCAMP3-205ENST00000472397 TTC39BQ5VTQ0 682 aaPredicted RBP10.31□□□□□ -0.76
SCAMP3-205ENST00000472397 OLFML1Q6UWY5 402 aa10.31□□□□□ -0.76
SCAMP3-205ENST00000472397 PARS2Q7L3T8 475 aaKnown RBP10.31□□□□□ -0.76
SCAMP3-205ENST00000472397 BEND5Q7L4P6 421 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms