RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 PHF7Q9BWX1 381 aaPredicted RBP9.94□□□□□ -0.82
CCM2-204ENST00000470837 FSD1LQ9BXM9 530 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 ETNK1Q9HBU6 452 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 GLOD4Q9HC38 313 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 IGSF9Q9P2J2 1179 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 NUMBLQ9Y6R0 609 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 LAMA3Q16787 3333 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 TRANK1O15050 2925 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 PRRC2BQ5JSZ5 2229 aaKnown RBP9.93□□□□□ -0.82
CCM2-204ENST00000470837 CXorf51AA0A1B0GTR3 108 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 GRXCR2A6NFK2 248 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 F5H423 210 aaPredicted RBP9.93□□□□□ -0.82
CCM2-204ENST00000470837 GOLGA8MH3BSY2 632 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 TIMM44O43615 452 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 SNAP91O60641 907 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 ASLP04424 464 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 NFKB1P19838 968 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 HLA-FP30511 346 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 CD70P32970 193 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 RECQLP46063 649 aaPredicted RBP9.93□□□□□ -0.82
CCM2-204ENST00000470837 NUMBP49757 651 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 PLK1P53350 603 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 NRLP54845 237 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 RHOAP61586 193 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 ST8SIA6P61647 398 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 ECT2LQ008S8 904 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 SLC10A7Q0GE19 358 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 SEMA5AQ13591 1074 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 HIF1AQ16665 826 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 KCTD19Q17RG1 926 aaPredicted RBP9.93□□□□□ -0.82
CCM2-204ENST00000470837 RNASEH2BQ5TBB1 312 aaKnown RBP9.93□□□□□ -0.82
CCM2-204ENST00000470837 RNF43Q68DV7 783 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 NAPEPLDQ6IQ20 393 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 HIBCHQ6NVY1 386 aaPredicted RBP9.93□□□□□ -0.82
CCM2-204ENST00000470837 POTEHQ6S545 545 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 LINC00523Q86TU6 105 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 GSPT2Q8IYD1 628 aaKnown RBP9.93□□□□□ -0.82
CCM2-204ENST00000470837 ZCCHC9Q8N567 271 aaKnown RBP9.93□□□□□ -0.82
CCM2-204ENST00000470837 TEX26Q8N6G2 289 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 DNAAF3Q8N9W5 541 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 ST13P5Q8NFI4 369 aaPredicted RBP9.93□□□□□ -0.82
CCM2-204ENST00000470837 OR52K2Q8NGK3 314 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 UCMAQ8WVF2 138 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 HNRNPLLQ8WVV9 542 aaKnown RBP9.93□□□□□ -0.82
CCM2-204ENST00000470837 CPT1BQ92523 772 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 FGF14Q92915 247 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 FCRL5Q96RD9 977 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 CIPCQ9C0C6 399 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 SLC25A51Q9H1U9 297 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 LRRC40Q9H9A6 602 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 XAB2Q9HCS7 855 aaKnown RBP9.93□□□□□ -0.82
CCM2-204ENST00000470837 SCUBE2Q9NQ36 999 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 EIF2B3Q9NR50 452 aaKnown RBP9.93□□□□□ -0.82
CCM2-204ENST00000470837 GRHL1Q9NZI5 618 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 FAM153AQ9UHL3 310 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 VPS51Q9UID3 782 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 PLA2G4CQ9UP65 541 aa9.93□□□□□ -0.82
CCM2-204ENST00000470837 MYO9BQ13459 2157 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 TBC1D3BA6NDS4 549 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 ANHXE9PGG2 379 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 TULP3O75386 442 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 TMCC1O94876 653 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 METTL18O95568 372 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 IGSF6O95976 241 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 HLA-DQB2P05538 268 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 SERPINF2P08697 491 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 TPSB2P20231 275 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 IVDP26440 423 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 MAPK8P45983 427 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 SERPINH1P50454 418 aaKnown RBP9.92□□□□□ -0.82
CCM2-204ENST00000470837 TNK2Q07912 1038 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 DHX9Q08211 1270 aaKnown RBP9.92□□□□□ -0.82
CCM2-204ENST00000470837 MPP3Q13368 585 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 HTR4Q13639 388 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 EIF4HQ15056 248 aaKnown RBP9.92□□□□□ -0.82
CCM2-204ENST00000470837 TRADDQ15628 312 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 TPSAB1Q15661 275 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 LEXMQ3ZCV2 418 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 ACCSLQ4AC99 568 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 SYCP2LQ5T4T6 812 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 MBLAC2Q68D91 279 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 PTCRAQ6ISU1 281 aaPredicted RBP9.92□□□□□ -0.82
CCM2-204ENST00000470837 LINGO4Q6UY18 593 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 APCDD1Q8J025 514 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 RYBPQ8N488 228 aaPredicted RBP9.92□□□□□ -0.82
CCM2-204ENST00000470837 PDCD7Q8N8D1 485 aaKnown RBP9.92□□□□□ -0.82
CCM2-204ENST00000470837 NAT8LQ8N9F0 302 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 MCUQ8NE86 351 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 TTC8Q8TAM2 541 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 WFDC5Q8TCV5 224 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 PRCCQ92733 491 aaPredicted RBP9.92□□□□□ -0.82
CCM2-204ENST00000470837 ASIC4Q96FT7 647 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 IFT43Q96FT9 208 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 GUCD1Q96NT3 240 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 PSKH2Q96QS6 385 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 ACBD3Q9H3P7 528 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 PDFQ9HBH1 243 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 VPS45Q9NRW7 570 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 CLEC4EQ9ULY5 219 aa9.92□□□□□ -0.82
CCM2-204ENST00000470837 SLC27A6Q9Y2P4 619 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms