RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 MCCD1P59942 119 aaPredicted RBP19.41■□□□□ 0.7
NCKIPSD-209ENST00000470006 RPS21P63220 83 aaKnown RBP19.41■□□□□ 0.7
NCKIPSD-209ENST00000470006 KRT83P78385 493 aa19.41■□□□□ 0.7
NCKIPSD-209ENST00000470006 PDE1CQ14123 709 aaPredicted RBP19.41■□□□□ 0.7
NCKIPSD-209ENST00000470006 ARSIQ5FYB1 569 aa19.41■□□□□ 0.7
NCKIPSD-209ENST00000470006 FBXL22Q6P050 247 aa19.41■□□□□ 0.7
NCKIPSD-209ENST00000470006 KYAT3Q6YP21 454 aaKnown RBP19.41■□□□□ 0.7
NCKIPSD-209ENST00000470006 C14orf80Q86SX3 495 aa19.41■□□□□ 0.7
NCKIPSD-209ENST00000470006 PPM1KQ8N3J5 372 aa19.41■□□□□ 0.7
NCKIPSD-209ENST00000470006 FBXO39Q8N4B4 442 aa19.41■□□□□ 0.7
NCKIPSD-209ENST00000470006 TMIEQ8NEW7 156 aa19.41■□□□□ 0.7
NCKIPSD-209ENST00000470006 WDR48Q8TAF3 677 aa19.41■□□□□ 0.7
NCKIPSD-209ENST00000470006 ALG14Q96F25 216 aa19.41■□□□□ 0.7
NCKIPSD-209ENST00000470006 PPP1R16AQ96I34 528 aa19.41■□□□□ 0.7
NCKIPSD-209ENST00000470006 FEM1CQ96JP0 617 aa19.41■□□□□ 0.7
NCKIPSD-209ENST00000470006 NT5C1BQ96P26 610 aa19.41■□□□□ 0.7
NCKIPSD-209ENST00000470006 PRMT1Q99873 361 aaKnown RBP19.41■□□□□ 0.7
NCKIPSD-209ENST00000470006 POPDC2Q9HBU9 364 aa19.41■□□□□ 0.7
NCKIPSD-209ENST00000470006 SEPT3Q9UH03 358 aa19.41■□□□□ 0.7
NCKIPSD-209ENST00000470006 VANGL2Q9ULK5 521 aa19.41■□□□□ 0.7
NCKIPSD-209ENST00000470006 TLN1Q9Y490 2541 aaKnown RBP19.41■□□□□ 0.7
NCKIPSD-209ENST00000470006 SUV39H1O43463 412 aa19.4■□□□□ 0.7
NCKIPSD-209ENST00000470006 MT-CO1P00395 513 aa19.4■□□□□ 0.7
NCKIPSD-209ENST00000470006 ITGB2P05107 769 aa19.4■□□□□ 0.7
NCKIPSD-209ENST00000470006 SRCP12931 536 aa19.4■□□□□ 0.7
NCKIPSD-209ENST00000470006 SYKP43405 635 aa19.4■□□□□ 0.7
NCKIPSD-209ENST00000470006 ACADSBP45954 432 aa19.4■□□□□ 0.7
NCKIPSD-209ENST00000470006 RECQLP46063 649 aaPredicted RBP19.4■□□□□ 0.7
NCKIPSD-209ENST00000470006 SGCGQ13326 291 aa19.4■□□□□ 0.7
NCKIPSD-209ENST00000470006 TGIF1Q15583 401 aa19.4■□□□□ 0.7
NCKIPSD-209ENST00000470006 SMYD4Q8IYR2 804 aaPredicted RBP19.4■□□□□ 0.7
NCKIPSD-209ENST00000470006 CHST14Q8NCH0 376 aa19.4■□□□□ 0.7
NCKIPSD-209ENST00000470006 OR52K2Q8NGK3 314 aa19.4■□□□□ 0.7
NCKIPSD-209ENST00000470006 OR2A12Q8NGT7 310 aa19.4■□□□□ 0.7
NCKIPSD-209ENST00000470006 NAT6Q93015 286 aa19.4■□□□□ 0.7
NCKIPSD-209ENST00000470006 CCDC3Q9BQI4 270 aa19.4■□□□□ 0.7
NCKIPSD-209ENST00000470006 SPASTQ9UBP0 616 aa19.4■□□□□ 0.7
NCKIPSD-209ENST00000470006 IL36AQ9UHA7 158 aa19.4■□□□□ 0.7
NCKIPSD-209ENST00000470006 KLF15Q9UIH9 416 aa19.4■□□□□ 0.7
NCKIPSD-209ENST00000470006 FLNCQ14315 2725 aa19.4■□□□□ 0.7
NCKIPSD-209ENST00000470006 K7ELQ4 463 aaPredicted RBP19.39■□□□□ 0.69
NCKIPSD-209ENST00000470006 K7ERQ8 282 aa19.39■□□□□ 0.69
NCKIPSD-209ENST00000470006 FPGTO14772 594 aa19.39■□□□□ 0.69
NCKIPSD-209ENST00000470006 TPP1O14773 563 aa19.39■□□□□ 0.69
NCKIPSD-209ENST00000470006 PLD2O14939 933 aa19.39■□□□□ 0.69
NCKIPSD-209ENST00000470006 CASC3O15234 703 aaKnown RBP19.39■□□□□ 0.69
NCKIPSD-209ENST00000470006 ENDOD1O94919 500 aa19.39■□□□□ 0.69
NCKIPSD-209ENST00000470006 F13A1P00488 732 aa19.39■□□□□ 0.69
NCKIPSD-209ENST00000470006 ZSCAN22P10073 491 aaPredicted RBP19.39■□□□□ 0.69
NCKIPSD-209ENST00000470006 RRM1P23921 792 aa19.39■□□□□ 0.69
NCKIPSD-209ENST00000470006 CMA1P23946 247 aa19.39■□□□□ 0.69
NCKIPSD-209ENST00000470006 CCR1P32246 355 aa19.39■□□□□ 0.69
NCKIPSD-209ENST00000470006 ADKP55263 362 aaKnown RBP19.39■□□□□ 0.69
NCKIPSD-209ENST00000470006 YWHAZP63104 245 aaKnown RBP19.39■□□□□ 0.69
NCKIPSD-209ENST00000470006 PITX1P78337 314 aaPredicted RBP19.39■□□□□ 0.69
NCKIPSD-209ENST00000470006 DNM1Q05193 864 aaKnown RBP19.39■□□□□ 0.69
NCKIPSD-209ENST00000470006 DPYDQ12882 1025 aa19.39■□□□□ 0.69
NCKIPSD-209ENST00000470006 C1orf61Q13536 156 aa19.39■□□□□ 0.69
NCKIPSD-209ENST00000470006 TMEM259Q4ZIN3 620 aa19.39■□□□□ 0.69
NCKIPSD-209ENST00000470006 ATL3Q6DD88 541 aa19.39■□□□□ 0.69
NCKIPSD-209ENST00000470006 KIAA1161Q6NSJ0 714 aa19.39■□□□□ 0.69
NCKIPSD-209ENST00000470006 BEND5Q7L4P6 421 aa19.39■□□□□ 0.69
NCKIPSD-209ENST00000470006 BTN2A2Q8WVV5 523 aa19.39■□□□□ 0.69
NCKIPSD-209ENST00000470006 MED15Q96RN5 788 aa19.39■□□□□ 0.69
NCKIPSD-209ENST00000470006 TSG101Q99816 390 aa19.39■□□□□ 0.69
NCKIPSD-209ENST00000470006 HDAC8Q9BY41 377 aa19.39■□□□□ 0.69
NCKIPSD-209ENST00000470006 DDIT4Q9NX09 232 aa19.39■□□□□ 0.69
NCKIPSD-209ENST00000470006 ANKMY1Q9P2S6 941 aa19.39■□□□□ 0.69
NCKIPSD-209ENST00000470006 RCOR1Q9UKL0 485 aa19.39■□□□□ 0.69
NCKIPSD-209ENST00000470006 RAD51BO15315 384 aa19.38■□□□□ 0.69
NCKIPSD-209ENST00000470006 SNAP91O60641 907 aa19.38■□□□□ 0.69
NCKIPSD-209ENST00000470006 AFPP02771 609 aaKnown RBP19.38■□□□□ 0.69
NCKIPSD-209ENST00000470006 ANXA6P08133 673 aa19.38■□□□□ 0.69
NCKIPSD-209ENST00000470006 IRAK1P51617 712 aa19.38■□□□□ 0.69
NCKIPSD-209ENST00000470006 CDK17Q00537 523 aa19.38■□□□□ 0.69
NCKIPSD-209ENST00000470006 SRSF6Q13247 344 aaKnown RBP19.38■□□□□ 0.69
NCKIPSD-209ENST00000470006 AUHQ13825 339 aaKnown RBP19.38■□□□□ 0.69
NCKIPSD-209ENST00000470006 PRRT3Q5FWE3 981 aa19.38■□□□□ 0.69
NCKIPSD-209ENST00000470006 ESRP1Q6NXG1 681 aaKnown RBP19.38■□□□□ 0.69
NCKIPSD-209ENST00000470006 RAB11FIP2Q7L804 512 aa19.38■□□□□ 0.69
NCKIPSD-209ENST00000470006 SLC35F3Q8IY50 421 aa19.38■□□□□ 0.69
NCKIPSD-209ENST00000470006 ZSCAN1Q8NBB4 408 aa19.38■□□□□ 0.69
NCKIPSD-209ENST00000470006 KAT5Q92993 513 aa19.38■□□□□ 0.69
NCKIPSD-209ENST00000470006 PPP1R13BQ96KQ4 1090 aa19.38■□□□□ 0.69
NCKIPSD-209ENST00000470006 C2orf49Q9BVC5 232 aaPredicted RBP19.38■□□□□ 0.69
NCKIPSD-209ENST00000470006 STRADBQ9C0K7 418 aa19.38■□□□□ 0.69
NCKIPSD-209ENST00000470006 TNKS2Q9H2K2 1166 aa19.38■□□□□ 0.69
NCKIPSD-209ENST00000470006 SEPT10Q9P0V9 454 aa19.38■□□□□ 0.69
NCKIPSD-209ENST00000470006 GULP1Q9UBP9 304 aa19.38■□□□□ 0.69
NCKIPSD-209ENST00000470006 APOBEC3BQ9UH17 382 aaKnown RBP19.38■□□□□ 0.69
NCKIPSD-209ENST00000470006 ARMCX3Q9UH62 379 aaPredicted RBP19.38■□□□□ 0.69
NCKIPSD-209ENST00000470006 HS3ST2Q9Y278 367 aa19.38■□□□□ 0.69
NCKIPSD-209ENST00000470006 RNF103O00237 685 aa19.37■□□□□ 0.69
NCKIPSD-209ENST00000470006 AGRPO00253 132 aa19.37■□□□□ 0.69
NCKIPSD-209ENST00000470006 SLC16A3O15427 465 aaKnown RBP19.37■□□□□ 0.69
NCKIPSD-209ENST00000470006 CLDN11O75508 207 aa19.37■□□□□ 0.69
NCKIPSD-209ENST00000470006 LEFTY1O75610 366 aa19.37■□□□□ 0.69
NCKIPSD-209ENST00000470006 IGLV3-25P01717 112 aa19.37■□□□□ 0.69
NCKIPSD-209ENST00000470006 RHOCP08134 193 aa19.37■□□□□ 0.69
NCKIPSD-209ENST00000470006 ITGB6P18564 788 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms