RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 HPCAL4Q9UM19 191 aa15.07■□□□□ 0
COL9A3-209ENST00000469852 CTAGE9A4FU28 777 aa15.06■□□□□ 0
COL9A3-209ENST00000469852 MUSKO15146 869 aa15.06■□□□□ 0
COL9A3-209ENST00000469852 TMCC1O94876 653 aa15.06■□□□□ 0
COL9A3-209ENST00000469852 FGGP02679 453 aa15.06■□□□□ 0
COL9A3-209ENST00000469852 EPHX1P07099 455 aa15.06■□□□□ 0
COL9A3-209ENST00000469852 HOXB2P14652 356 aa15.06■□□□□ 0
COL9A3-209ENST00000469852 NR2C2P49116 596 aa15.06■□□□□ 0
COL9A3-209ENST00000469852 VASPP50552 380 aaPredicted RBP15.06■□□□□ 0
COL9A3-209ENST00000469852 ST8SIA6P61647 398 aa15.06■□□□□ 0
COL9A3-209ENST00000469852 SATB1Q01826 763 aa15.06■□□□□ 0
COL9A3-209ENST00000469852 PPIDQ08752 370 aaKnown RBP15.06■□□□□ 0
COL9A3-209ENST00000469852 SLC10A7Q0GE19 358 aa15.06■□□□□ 0
COL9A3-209ENST00000469852 HNRNPA1L2Q32P51 320 aaKnown RBP15.06■□□□□ 0
COL9A3-209ENST00000469852 ACCSLQ4AC99 568 aa15.06■□□□□ 0
COL9A3-209ENST00000469852 CCDC181Q5TID7 509 aa15.06■□□□□ 0
COL9A3-209ENST00000469852 C22orf39Q6P5X5 142 aa15.06■□□□□ 0
COL9A3-209ENST00000469852 Q6ZVU0 165 aa15.06■□□□□ 0
COL9A3-209ENST00000469852 KDM1BQ8NB78 822 aa15.06■□□□□ 0
COL9A3-209ENST00000469852 CCNYQ8ND76 341 aa15.06■□□□□ 0
COL9A3-209ENST00000469852 PTPRN2Q92932 1015 aa15.06■□□□□ 0
COL9A3-209ENST00000469852 PBKQ96KB5 322 aa15.06■□□□□ 0
COL9A3-209ENST00000469852 TSGA13Q96PP4 275 aa15.06■□□□□ 0
COL9A3-209ENST00000469852 LHX3Q9UBR4 397 aa15.06■□□□□ 0
COL9A3-209ENST00000469852 ZSCAN5CA6NGD5 496 aaPredicted RBP15.05■□□□□ -0
COL9A3-209ENST00000469852 KCNK1O00180 336 aa15.05■□□□□ -0
COL9A3-209ENST00000469852 RNF103O00237 685 aa15.05■□□□□ -0
COL9A3-209ENST00000469852 SIN3BO75182 1162 aa15.05■□□□□ -0
COL9A3-209ENST00000469852 GJB3O75712 270 aa15.05■□□□□ -0
COL9A3-209ENST00000469852 MX2P20592 715 aa15.05■□□□□ -0
COL9A3-209ENST00000469852 CCNCP24863 283 aa15.05■□□□□ -0
COL9A3-209ENST00000469852 CASQ1P31415 396 aa15.05■□□□□ -0
COL9A3-209ENST00000469852 RGRP47804 291 aa15.05■□□□□ -0
COL9A3-209ENST00000469852 NRLP54845 237 aa15.05■□□□□ -0
COL9A3-209ENST00000469852 AP1B1Q10567 949 aa15.05■□□□□ -0
COL9A3-209ENST00000469852 ZBTB17Q13105 803 aa15.05■□□□□ -0
COL9A3-209ENST00000469852 PDK1Q15118 436 aa15.05■□□□□ -0
COL9A3-209ENST00000469852 PRKD1Q15139 912 aaPredicted RBP15.05■□□□□ -0
COL9A3-209ENST00000469852 ATXN7L2Q5T6C5 722 aaPredicted RBP15.05■□□□□ -0
COL9A3-209ENST00000469852 C9orf64Q5T6V5 341 aa15.05■□□□□ -0
COL9A3-209ENST00000469852 CCDC13Q8IYE1 715 aa15.05■□□□□ -0
COL9A3-209ENST00000469852 PGBD5Q8N414 524 aa15.05■□□□□ -0
COL9A3-209ENST00000469852 SPEM1Q8N4L4 309 aa15.05■□□□□ -0
COL9A3-209ENST00000469852 C1orf54Q8WWF1 131 aa15.05■□□□□ -0
COL9A3-209ENST00000469852 MAML1Q92585 1016 aa15.05■□□□□ -0
COL9A3-209ENST00000469852 VOPP1Q96AW1 172 aa15.05■□□□□ -0
COL9A3-209ENST00000469852 EXOC2Q96KP1 924 aa15.05■□□□□ -0
COL9A3-209ENST00000469852 QKIQ96PU8 341 aaKnown RBP eCLIP15.05■□□□□ -0
COL9A3-209ENST00000469852 CEP41Q9BYV8 373 aa15.05■□□□□ -0
COL9A3-209ENST00000469852 TM6SF2Q9BZW4 377 aa15.05■□□□□ -0
COL9A3-209ENST00000469852 SLC6A17Q9H1V8 727 aa15.05■□□□□ -0
COL9A3-209ENST00000469852 PRSS16Q9NQE7 514 aa15.05■□□□□ -0
COL9A3-209ENST00000469852 CACNA1IQ9P0X4 2223 aa15.04■□□□□ -0
COL9A3-209ENST00000469852 CXorf51AA0A1B0GTR3 108 aa15.04■□□□□ -0
COL9A3-209ENST00000469852 TTC24A2A3L6 582 aaPredicted RBP15.04■□□□□ -0
COL9A3-209ENST00000469852 PPP1R12AO14974 1030 aaPredicted RBP15.04■□□□□ -0
COL9A3-209ENST00000469852 NPC1O15118 1278 aa15.04■□□□□ -0
COL9A3-209ENST00000469852 MATN3O15232 486 aa15.04■□□□□ -0
COL9A3-209ENST00000469852 BNIP3LO60238 219 aa15.04■□□□□ -0
COL9A3-209ENST00000469852 CLCN6P51797 869 aa15.04■□□□□ -0
COL9A3-209ENST00000469852 COPAP53621 1224 aa15.04■□□□□ -0
COL9A3-209ENST00000469852 EIF3EP60228 445 aaKnown RBP15.04■□□□□ -0
COL9A3-209ENST00000469852 SLC20A2Q08357 652 aa15.04■□□□□ -0
COL9A3-209ENST00000469852 LBRQ14739 615 aaKnown RBP15.04■□□□□ -0
COL9A3-209ENST00000469852 CRY1Q16526 586 aa15.04■□□□□ -0
COL9A3-209ENST00000469852 LONRF2Q1L5Z9 754 aa15.04■□□□□ -0
COL9A3-209ENST00000469852 HSF5Q4G112 596 aaPredicted RBP15.04■□□□□ -0
COL9A3-209ENST00000469852 INO80DQ53TQ3 878 aaPredicted RBP15.04■□□□□ -0
COL9A3-209ENST00000469852 EOGTQ5NDL2 527 aa15.04■□□□□ -0
COL9A3-209ENST00000469852 TMCO4Q5TGY1 634 aa15.04■□□□□ -0
COL9A3-209ENST00000469852 SYT13Q7L8C5 426 aa15.04■□□□□ -0
COL9A3-209ENST00000469852 TRMT11Q7Z4G4 463 aaKnown RBP15.04■□□□□ -0
COL9A3-209ENST00000469852 LRRC49Q8IUZ0 686 aa15.04■□□□□ -0
COL9A3-209ENST00000469852 TSEN2Q8NCE0 465 aaKnown RBP15.04■□□□□ -0
COL9A3-209ENST00000469852 CHST14Q8NCH0 376 aa15.04■□□□□ -0
COL9A3-209ENST00000469852 OR2A12Q8NGT7 310 aa15.04■□□□□ -0
COL9A3-209ENST00000469852 OR6K2Q8NGY2 324 aa15.04■□□□□ -0
COL9A3-209ENST00000469852 CCDC26Q8TAB7 109 aa15.04■□□□□ -0
COL9A3-209ENST00000469852 SLC35B2Q8TB61 432 aa15.04■□□□□ -0
COL9A3-209ENST00000469852 CAPZA3Q96KX2 299 aa15.04■□□□□ -0
COL9A3-209ENST00000469852 NSMCE3Q96MG7 304 aa15.04■□□□□ -0
COL9A3-209ENST00000469852 ZNF599Q96NL3 588 aa15.04■□□□□ -0
COL9A3-209ENST00000469852 DNPEPQ9ULA0 475 aa15.04■□□□□ -0
COL9A3-209ENST00000469852 EDDM13A0A1B0GTR0 161 aa15.03■□□□□ -0
COL9A3-209ENST00000469852 H7C0C1 242 aa15.03■□□□□ -0
COL9A3-209ENST00000469852 CES2O00748 559 aa15.03■□□□□ -0
COL9A3-209ENST00000469852 RBP3P10745 1247 aa15.03■□□□□ -0
COL9A3-209ENST00000469852 PRLRP16471 622 aa15.03■□□□□ -0
COL9A3-209ENST00000469852 TCP1P17987 556 aaKnown RBP15.03■□□□□ -0
COL9A3-209ENST00000469852 RBL1P28749 1068 aa15.03■□□□□ -0
COL9A3-209ENST00000469852 AVPR2P30518 371 aa15.03■□□□□ -0
COL9A3-209ENST00000469852 GKP32189 559 aa15.03■□□□□ -0
COL9A3-209ENST00000469852 NNMTP40261 264 aa15.03■□□□□ -0
COL9A3-209ENST00000469852 MAGEA9P43362 315 aa15.03■□□□□ -0
COL9A3-209ENST00000469852 ATP5OP48047 213 aa15.03■□□□□ -0
COL9A3-209ENST00000469852 GEMIN4P57678 1058 aaKnown RBP15.03■□□□□ -0
COL9A3-209ENST00000469852 RHOAP61586 193 aa15.03■□□□□ -0
COL9A3-209ENST00000469852 TCF15Q12870 199 aa15.03■□□□□ -0
COL9A3-209ENST00000469852 CAMK2GQ13555 558 aaPredicted RBP15.03■□□□□ -0
COL9A3-209ENST00000469852 KCTD19Q17RG1 926 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms