RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 GABPB2Q8TAK5 448 aaPredicted RBP5.76□□□□□ -1.49
XRN1-207ENST00000468894 BICD2Q8TD16 824 aa5.76□□□□□ -1.49
XRN1-207ENST00000468894 PSMD1Q99460 953 aa5.76□□□□□ -1.49
XRN1-207ENST00000468894 NPLQ9BXD5 320 aaPredicted RBP5.76□□□□□ -1.49
XRN1-207ENST00000468894 POLDIP3Q9BY77 421 aaKnown RBP5.76□□□□□ -1.49
XRN1-207ENST00000468894 RBM38Q9H0Z9 239 aaKnown RBP5.76□□□□□ -1.49
XRN1-207ENST00000468894 KRCC1Q9NPI7 259 aaPredicted RBP5.76□□□□□ -1.49
XRN1-207ENST00000468894 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.76□□□□□ -1.49
XRN1-207ENST00000468894 RPS10-NUDT3A0A1W2PQS6 291 aa5.75□□□□□ -1.49
XRN1-207ENST00000468894 FAM90A7PA6NKC0 464 aa5.75□□□□□ -1.49
XRN1-207ENST00000468894 FAM90A22PA8MWA6 464 aa5.75□□□□□ -1.49
XRN1-207ENST00000468894 FAM90A12PA8MX19 464 aa5.75□□□□□ -1.49
XRN1-207ENST00000468894 FAM90A23PA8MXZ1 464 aa5.75□□□□□ -1.49
XRN1-207ENST00000468894 STMND1H3BQB6 276 aa5.75□□□□□ -1.49
XRN1-207ENST00000468894 INSIG1O15503 277 aa5.75□□□□□ -1.49
XRN1-207ENST00000468894 CLDN7O95471 211 aa5.75□□□□□ -1.49
XRN1-207ENST00000468894 WEE2P0C1S8 567 aa5.75□□□□□ -1.49
XRN1-207ENST00000468894 ARRB2P32121 409 aa5.75□□□□□ -1.49
XRN1-207ENST00000468894 DPP6P42658 865 aa5.75□□□□□ -1.49
XRN1-207ENST00000468894 RFX5P48382 616 aaPredicted RBP5.75□□□□□ -1.49
XRN1-207ENST00000468894 PPP3CCP48454 512 aa5.75□□□□□ -1.49
XRN1-207ENST00000468894 CCR5P51681 352 aa5.75□□□□□ -1.49
XRN1-207ENST00000468894 TRAF1Q13077 416 aa5.75□□□□□ -1.49
XRN1-207ENST00000468894 FHL1Q13642 323 aa5.75□□□□□ -1.49
XRN1-207ENST00000468894 BBS12Q6ZW61 710 aa5.75□□□□□ -1.49
XRN1-207ENST00000468894 SERPINA11Q86U17 422 aa5.75□□□□□ -1.49
XRN1-207ENST00000468894 CLSTN3Q9BQT9 956 aa5.75□□□□□ -1.49
XRN1-207ENST00000468894 LMAN2LQ9H0V9 348 aa5.75□□□□□ -1.49
XRN1-207ENST00000468894 TTC12Q9H892 705 aaPredicted RBP5.75□□□□□ -1.49
XRN1-207ENST00000468894 MRPL44Q9H9J2 332 aaKnown RBP5.75□□□□□ -1.49
XRN1-207ENST00000468894 RIC8AQ9NPQ8 531 aa5.75□□□□□ -1.49
XRN1-207ENST00000468894 SAGE1Q9NXZ1 904 aa5.75□□□□□ -1.49
XRN1-207ENST00000468894 SEL1LQ9UBV2 794 aa5.75□□□□□ -1.49
XRN1-207ENST00000468894 FBXO40Q9UH90 709 aa5.75□□□□□ -1.49
XRN1-207ENST00000468894 CLDN16Q9Y5I7 305 aa5.75□□□□□ -1.49
XRN1-207ENST00000468894 INSL5Q9Y5Q6 135 aa5.75□□□□□ -1.49
XRN1-207ENST00000468894 I6L893 689 aaPredicted RBP5.74□□□□□ -1.49
XRN1-207ENST00000468894 KCNAB3O43448 404 aa5.74□□□□□ -1.49
XRN1-207ENST00000468894 ADAP00813 363 aa5.74□□□□□ -1.49
XRN1-207ENST00000468894 ALPLP05186 524 aa5.74□□□□□ -1.49
XRN1-207ENST00000468894 AVPR1AP37288 418 aa5.74□□□□□ -1.49
XRN1-207ENST00000468894 RFX2P48378 723 aa5.74□□□□□ -1.49
XRN1-207ENST00000468894 PGGT1BP53609 377 aa5.74□□□□□ -1.49
XRN1-207ENST00000468894 GPR18Q14330 331 aa5.74□□□□□ -1.49
XRN1-207ENST00000468894 ME3Q16798 604 aa5.74□□□□□ -1.49
XRN1-207ENST00000468894 LCE1AQ5T7P2 110 aa5.74□□□□□ -1.49
XRN1-207ENST00000468894 CYP26C1Q6V0L0 522 aa5.74□□□□□ -1.49
XRN1-207ENST00000468894 Q6ZTK2 550 aa5.74□□□□□ -1.49
XRN1-207ENST00000468894 LSM14AQ8ND56 463 aaKnown RBP5.74□□□□□ -1.49
XRN1-207ENST00000468894 MYRIPQ8NFW9 859 aa5.74□□□□□ -1.49
XRN1-207ENST00000468894 CEP76Q8TAP6 659 aa5.74□□□□□ -1.49
XRN1-207ENST00000468894 STAMQ92783 540 aa5.74□□□□□ -1.49
XRN1-207ENST00000468894 UBXN10Q96LJ8 280 aa5.74□□□□□ -1.49
XRN1-207ENST00000468894 PHF7Q9BWX1 381 aaPredicted RBP5.74□□□□□ -1.49
XRN1-207ENST00000468894 MROH8Q9H579 483 aa5.74□□□□□ -1.49
XRN1-207ENST00000468894 PLAC1Q9HBJ0 212 aa5.74□□□□□ -1.49
XRN1-207ENST00000468894 ATP8A2Q9NTI2 1148 aa5.74□□□□□ -1.49
XRN1-207ENST00000468894 RAI2Q9Y5P3 530 aa5.74□□□□□ -1.49
XRN1-207ENST00000468894 C17orf102A2RUQ5 167 aa5.73□□□□□ -1.49
XRN1-207ENST00000468894 BECN2A8MW95 431 aa5.73□□□□□ -1.49
XRN1-207ENST00000468894 HSPB6O14558 160 aa5.73□□□□□ -1.49
XRN1-207ENST00000468894 ANP32CO43423 234 aa5.73□□□□□ -1.49
XRN1-207ENST00000468894 TSPAN3O60637 253 aa5.73□□□□□ -1.49
XRN1-207ENST00000468894 LCATP04180 440 aa5.73□□□□□ -1.49
XRN1-207ENST00000468894 MYZAPP0CAP1 466 aa5.73□□□□□ -1.49
XRN1-207ENST00000468894 ARSBP15848 533 aa5.73□□□□□ -1.49
XRN1-207ENST00000468894 CCT5P48643 541 aa5.73□□□□□ -1.49
XRN1-207ENST00000468894 NANOS2P60321 138 aaKnown RBP5.73□□□□□ -1.49
XRN1-207ENST00000468894 UBE3AQ05086 875 aa5.73□□□□□ -1.49
XRN1-207ENST00000468894 BIRC3Q13489 604 aa5.73□□□□□ -1.49
XRN1-207ENST00000468894 DCAF12L2Q5VW00 463 aa5.73□□□□□ -1.49
XRN1-207ENST00000468894 HEPHL1Q6MZM0 1159 aa5.73□□□□□ -1.49
XRN1-207ENST00000468894 SMC5Q8IY18 1101 aa5.73□□□□□ -1.49
XRN1-207ENST00000468894 ZDHHC23Q8IYP9 409 aa5.73□□□□□ -1.49
XRN1-207ENST00000468894 SAMD14Q8IZD0 417 aaPredicted RBP5.73□□□□□ -1.49
XRN1-207ENST00000468894 OR4N2Q8NGD1 307 aa5.73□□□□□ -1.49
XRN1-207ENST00000468894 NCKIPSDQ9NZQ3 722 aa5.73□□□□□ -1.49
XRN1-207ENST00000468894 SH2D7A6NKC9 451 aaPredicted RBP5.72□□□□□ -1.49
XRN1-207ENST00000468894 SERPINC1P01008 464 aa5.72□□□□□ -1.49
XRN1-207ENST00000468894 CYP1A2P05177 515 aa5.72□□□□□ -1.49
XRN1-207ENST00000468894 YWHAQP27348 245 aa5.72□□□□□ -1.49
XRN1-207ENST00000468894 CHRNDQ07001 517 aa5.72□□□□□ -1.49
XRN1-207ENST00000468894 KRTAP1-1Q07627 177 aa5.72□□□□□ -1.49
XRN1-207ENST00000468894 ZRSR2Q15696 482 aaKnown RBP5.72□□□□□ -1.49
XRN1-207ENST00000468894 SLC18A3Q16572 532 aa5.72□□□□□ -1.49
XRN1-207ENST00000468894 ZNF284Q2VY69 593 aa5.72□□□□□ -1.49
XRN1-207ENST00000468894 ATG16L1Q676U5 607 aa5.72□□□□□ -1.49
XRN1-207ENST00000468894 LVRNQ6Q4G3 990 aa5.72□□□□□ -1.49
XRN1-207ENST00000468894 Q6ZSV7 163 aa5.72□□□□□ -1.49
XRN1-207ENST00000468894 CADM3Q8N126 398 aa5.72□□□□□ -1.49
XRN1-207ENST00000468894 GHDCQ8N2G8 530 aa5.72□□□□□ -1.49
XRN1-207ENST00000468894 B4GALNT2Q8NHY0 566 aa5.72□□□□□ -1.49
XRN1-207ENST00000468894 OIT3Q8WWZ8 545 aa5.72□□□□□ -1.49
XRN1-207ENST00000468894 RAB40AQ8WXH6 277 aa5.72□□□□□ -1.49
XRN1-207ENST00000468894 ATOH1Q92858 354 aaPredicted RBP5.72□□□□□ -1.49
XRN1-207ENST00000468894 ZNF333Q96JL9 665 aa5.72□□□□□ -1.49
XRN1-207ENST00000468894 APOLD1Q96LR9 279 aa5.72□□□□□ -1.49
XRN1-207ENST00000468894 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.72□□□□□ -1.49
XRN1-207ENST00000468894 WDR6Q9NNW5 1121 aaKnown RBP5.72□□□□□ -1.49
XRN1-207ENST00000468894 TMEM160Q9NX00 188 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms