RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 RETSATQ6NUM9 610 aa6.12□□□□□ -1.43
SHQ1-205ENST00000468371 TSSK4Q6SA08 328 aa6.12□□□□□ -1.43
SHQ1-205ENST00000468371 GAREM2Q75VX8 874 aa6.12□□□□□ -1.43
SHQ1-205ENST00000468371 ANKS1BQ7Z6G8 1248 aa6.12□□□□□ -1.43
SHQ1-205ENST00000468371 SCUBE3Q8IX30 993 aa6.12□□□□□ -1.43
SHQ1-205ENST00000468371 PDIK1LQ8N165 341 aa6.12□□□□□ -1.43
SHQ1-205ENST00000468371 SYNPOQ8N3V7 929 aa6.12□□□□□ -1.43
SHQ1-205ENST00000468371 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.12□□□□□ -1.43
SHQ1-205ENST00000468371 PPM1NQ8N819 430 aa6.12□□□□□ -1.43
SHQ1-205ENST00000468371 ROPN1BQ9BZX4 212 aaPredicted RBP6.12□□□□□ -1.43
SHQ1-205ENST00000468371 MYLK2Q9H1R3 596 aa6.12□□□□□ -1.43
SHQ1-205ENST00000468371 ROPN1Q9HAT0 212 aaPredicted RBP6.12□□□□□ -1.43
SHQ1-205ENST00000468371 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.12□□□□□ -1.43
SHQ1-205ENST00000468371 PCSK1NQ9UHG2 260 aa6.12□□□□□ -1.43
SHQ1-205ENST00000468371 C2orf78A6NCI8 922 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 B2RBV5 119 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 KPNA3O00505 521 aaPredicted RBP6.11□□□□□ -1.43
SHQ1-205ENST00000468371 TIMM44O43615 452 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 TBX18O95935 607 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 IL1BP01584 269 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 TYRP14679 529 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 PDGFRAP16234 1089 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 KRT4P19013 534 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 ETFBP38117 255 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 STAT4Q14765 748 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 POLD3Q15054 466 aaPredicted RBP6.11□□□□□ -1.43
SHQ1-205ENST00000468371 SLC5A9Q2M3M2 681 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 FAM46CQ5VWP2 391 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 TRIM72Q6ZMU5 477 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 NLRP9Q7RTR0 991 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 IRF2BP2Q7Z5L9 587 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 EXOC3L1Q86VI1 746 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 ST13P4Q8IZP2 240 aaPredicted RBP6.11□□□□□ -1.43
SHQ1-205ENST00000468371 CRYBG2Q8N1P7 616 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 SETD7Q8WTS6 366 aaKnown RBP6.11□□□□□ -1.43
SHQ1-205ENST00000468371 ALG3Q92685 438 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 SLC35C1Q96A29 364 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 PGM2Q96G03 612 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 SERPINB12Q96P63 405 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 EPAS1Q99814 870 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 HAPLN2Q9GZV7 340 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 SLCO1B3Q9NPD5 702 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 NDE1Q9NXR1 346 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 HEY2Q9UBP5 337 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 RAPGEFL1Q9UHV5 662 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 LRRC37A2A6NM11 1700 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 TCRBV21S2A2A0A5A6 115 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 LRRC72A6NJI9 287 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 H3BRJ5 948 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 COPEO14579 308 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 XPO1O14980 1071 aaKnown RBP6.11□□□□□ -1.43
SHQ1-205ENST00000468371 HCRTO43612 131 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 CREB3O43889 395 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 CILPO75339 1184 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 MICAL2O94851 1124 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 SNUPNO95149 360 aaKnown RBP6.11□□□□□ -1.43
SHQ1-205ENST00000468371 MAPK8P45983 427 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 VCPP55072 806 aaKnown RBP6.11□□□□□ -1.43
SHQ1-205ENST00000468371 CUL3Q13618 768 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 MAP7D3Q8IWC1 876 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 PJA1Q8NG27 643 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 ADAM32Q8TC27 787 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 USP13Q92995 863 aaPredicted RBP6.11□□□□□ -1.43
SHQ1-205ENST00000468371 TRIM11Q96F44 468 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 CENPKQ9BS16 269 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 GANQ9H2C0 597 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 LINC00597Q9H2U6 94 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 SPHK2Q9NRA0 654 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 RRN3Q9NYV6 651 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 GGA2Q9UJY4 613 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 DOCK5Q9H7D0 1870 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 SOBPA7XYQ1 873 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 C1QTNF3-AMACRE9PGA6 284 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 SYPP08247 313 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 GJA4P35212 333 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 DPP6P42658 865 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 NUMBP49757 651 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 GCNT1Q02742 428 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 SGCGQ13326 291 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 MRPL58Q14197 206 aaKnown RBP6.11□□□□□ -1.43
SHQ1-205ENST00000468371 SUZ12Q15022 739 aaKnown RBP6.11□□□□□ -1.43
SHQ1-205ENST00000468371 INAVAQ3KP66 663 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 CBWD6Q4V339 395 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 CBWD3Q5JTY5 395 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 CBWD5Q5RIA9 395 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 DARS2Q6PI48 645 aaKnown RBP6.11□□□□□ -1.43
SHQ1-205ENST00000468371 VITQ6UXI7 678 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 CHST9Q7L1S5 443 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 RABEPKQ7Z6M1 372 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 SLC47A2Q86VL8 602 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 RASSF3Q86WH2 238 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 DEFB119Q8N690 84 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 ATP11CQ8NB49 1132 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 AGR3Q8TD06 166 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 WFIKKN2Q8TEU8 576 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 PPP4R1Q8TF05 950 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 SREK1Q8WXA9 508 aaKnown RBP6.11□□□□□ -1.43
SHQ1-205ENST00000468371 HSPH1Q92598 858 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 KAT5Q92993 513 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 ZSWIM3Q96MP5 696 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms