RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 EFTUD2Q15029 972 aaKnown RBP eCLIP20.95■□□□□ 0.94
TMEM53-207ENST00000468117 DUSP6Q16828 381 aa20.95■□□□□ 0.94
TMEM53-207ENST00000468117 FSCBQ5H9T9 825 aa20.95■□□□□ 0.94
TMEM53-207ENST00000468117 RNF219Q5W0B1 726 aaPredicted RBP20.95■□□□□ 0.94
TMEM53-207ENST00000468117 CASC4Q6P4E1 433 aa20.95■□□□□ 0.94
TMEM53-207ENST00000468117 DNAAF3Q8N9W5 541 aa20.95■□□□□ 0.94
TMEM53-207ENST00000468117 TDRD5Q8NAT2 981 aaKnown RBP20.95■□□□□ 0.94
TMEM53-207ENST00000468117 FAM76AQ8TAV0 307 aa20.95■□□□□ 0.94
TMEM53-207ENST00000468117 RIN3Q8TB24 985 aa20.95■□□□□ 0.94
TMEM53-207ENST00000468117 ING5Q8WYH8 240 aa20.95■□□□□ 0.94
TMEM53-207ENST00000468117 MRRFQ96E11 262 aaKnown RBP20.95■□□□□ 0.94
TMEM53-207ENST00000468117 XPO6Q96QU8 1125 aaKnown RBP20.95■□□□□ 0.94
TMEM53-207ENST00000468117 LRRC40Q9H9A6 602 aa20.95■□□□□ 0.94
TMEM53-207ENST00000468117 TBK1Q9UHD2 729 aa20.95■□□□□ 0.94
TMEM53-207ENST00000468117 ZNF510Q9Y2H8 683 aa20.95■□□□□ 0.94
TMEM53-207ENST00000468117 ACTL7AQ9Y615 435 aa20.95■□□□□ 0.94
TMEM53-207ENST00000468117 ANXA9O76027 345 aa20.94■□□□□ 0.94
TMEM53-207ENST00000468117 MAGOHP61326 146 aaKnown RBP20.94■□□□□ 0.94
TMEM53-207ENST00000468117 LBRQ14739 615 aaKnown RBP20.94■□□□□ 0.94
TMEM53-207ENST00000468117 TMC5Q6UXY8 1006 aa20.94■□□□□ 0.94
TMEM53-207ENST00000468117 KLHDC8BQ8IXV7 354 aa20.94■□□□□ 0.94
TMEM53-207ENST00000468117 IPMKQ8NFU5 416 aa20.94■□□□□ 0.94
TMEM53-207ENST00000468117 DDI1Q8WTU0 396 aa20.94■□□□□ 0.94
TMEM53-207ENST00000468117 USP13Q92995 863 aaPredicted RBP20.94■□□□□ 0.94
TMEM53-207ENST00000468117 MUC3BQ9H195 1237 aa20.94■□□□□ 0.94
TMEM53-207ENST00000468117 ACSS3Q9H6R3 686 aa20.94■□□□□ 0.94
TMEM53-207ENST00000468117 PIDD1Q9HB75 910 aa20.94■□□□□ 0.94
TMEM53-207ENST00000468117 ATP13A1Q9HD20 1204 aa20.94■□□□□ 0.94
TMEM53-207ENST00000468117 CASS4Q9NQ75 786 aa20.94■□□□□ 0.94
TMEM53-207ENST00000468117 SYBUQ9NX95 663 aa20.94■□□□□ 0.94
TMEM53-207ENST00000468117 PRRC2BQ5JSZ5 2229 aaKnown RBP20.94■□□□□ 0.94
TMEM53-207ENST00000468117 HPDP32754 393 aaPredicted RBP20.94■□□□□ 0.94
TMEM53-207ENST00000468117 OXCT1P55809 520 aa20.94■□□□□ 0.94
TMEM53-207ENST00000468117 CBX2Q14781 532 aaPredicted RBP20.94■□□□□ 0.94
TMEM53-207ENST00000468117 TMCO4Q5TGY1 634 aa20.94■□□□□ 0.94
TMEM53-207ENST00000468117 ELMSAN1Q6PJG2 1045 aa20.94■□□□□ 0.94
TMEM53-207ENST00000468117 POTEHQ6S545 545 aa20.94■□□□□ 0.94
TMEM53-207ENST00000468117 UNC5AQ6ZN44 842 aa20.94■□□□□ 0.94
TMEM53-207ENST00000468117 TPGS1Q6ZTW0 290 aa20.94■□□□□ 0.94
TMEM53-207ENST00000468117 PGBD5Q8N414 524 aa20.94■□□□□ 0.94
TMEM53-207ENST00000468117 VN1R2Q8NFZ6 395 aa20.94■□□□□ 0.94
TMEM53-207ENST00000468117 SMG7Q92540 1137 aaKnown RBP20.94■□□□□ 0.94
TMEM53-207ENST00000468117 TLCD1Q96CP7 247 aa20.94■□□□□ 0.94
TMEM53-207ENST00000468117 STAMBPL1Q96FJ0 436 aa20.94■□□□□ 0.94
TMEM53-207ENST00000468117 ZSWIM3Q96MP5 696 aa20.94■□□□□ 0.94
TMEM53-207ENST00000468117 LMAN2LQ9H0V9 348 aa20.94■□□□□ 0.94
TMEM53-207ENST00000468117 TDP1Q9NUW8 608 aa20.94■□□□□ 0.94
TMEM53-207ENST00000468117 PLK2Q9NYY3 685 aa20.94■□□□□ 0.94
TMEM53-207ENST00000468117 ADAM21Q9UKJ8 722 aa20.94■□□□□ 0.94
TMEM53-207ENST00000468117 MYLKQ15746 1914 aa20.93■□□□□ 0.94
TMEM53-207ENST00000468117 TTC24A2A3L6 582 aaPredicted RBP20.93■□□□□ 0.94
TMEM53-207ENST00000468117 KDELR3O43731 214 aa20.93■□□□□ 0.94
TMEM53-207ENST00000468117 CDH16O75309 829 aa20.93■□□□□ 0.94
TMEM53-207ENST00000468117 PMPCBO75439 489 aa20.93■□□□□ 0.94
TMEM53-207ENST00000468117 LUC7L3O95232 432 aaKnown RBP20.93■□□□□ 0.94
TMEM53-207ENST00000468117 PRAMEF12O95522 483 aa20.93■□□□□ 0.94
TMEM53-207ENST00000468117 CEBPBP17676 345 aa20.93■□□□□ 0.94
TMEM53-207ENST00000468117 NAPEPLDQ6IQ20 393 aa20.93■□□□□ 0.94
TMEM53-207ENST00000468117 CPXM2Q8N436 756 aa20.93■□□□□ 0.94
TMEM53-207ENST00000468117 WFDC5Q8TCV5 224 aa20.93■□□□□ 0.94
TMEM53-207ENST00000468117 PKNOX2Q96KN3 472 aa20.93■□□□□ 0.94
TMEM53-207ENST00000468117 SLC25A51Q9H1U9 297 aa20.93■□□□□ 0.94
TMEM53-207ENST00000468117 CBX4O00257 560 aa20.92■□□□□ 0.94
TMEM53-207ENST00000468117 SPAG6O75602 509 aa20.92■□□□□ 0.94
TMEM53-207ENST00000468117 AGTP01019 485 aa20.92■□□□□ 0.94
TMEM53-207ENST00000468117 NR1D1P20393 614 aa20.92■□□□□ 0.94
TMEM53-207ENST00000468117 GEMP55040 296 aa20.92■□□□□ 0.94
TMEM53-207ENST00000468117 CDH18Q13634 790 aa20.92■□□□□ 0.94
TMEM53-207ENST00000468117 PRPF39Q86UA1 669 aaKnown RBP20.92■□□□□ 0.94
TMEM53-207ENST00000468117 CYP4X1Q8N118 509 aa20.92■□□□□ 0.94
TMEM53-207ENST00000468117 IMP4Q96G21 291 aaKnown RBP20.92■□□□□ 0.94
TMEM53-207ENST00000468117 ACE2Q9BYF1 805 aaPredicted RBP20.92■□□□□ 0.94
TMEM53-207ENST00000468117 EURLQ9NYK6 297 aa20.92■□□□□ 0.94
TMEM53-207ENST00000468117 MRPS23Q9Y3D9 190 aaKnown RBP20.92■□□□□ 0.94
TMEM53-207ENST00000468117 XIRP2A4UGR9 3374 aa20.92■□□□□ 0.94
TMEM53-207ENST00000468117 E2F8A0AVK6 867 aa20.92■□□□□ 0.94
TMEM53-207ENST00000468117 FOXO6A8MYZ6 492 aa20.92■□□□□ 0.94
TMEM53-207ENST00000468117 PSMD3O43242 534 aa20.92■□□□□ 0.94
TMEM53-207ENST00000468117 MZF1P28698 734 aaPredicted RBP20.92■□□□□ 0.94
TMEM53-207ENST00000468117 DSC2Q02487 901 aa20.92■□□□□ 0.94
TMEM53-207ENST00000468117 TNK2Q07912 1038 aa20.92■□□□□ 0.94
TMEM53-207ENST00000468117 NIPAL4Q0D2K0 466 aa20.92■□□□□ 0.94
TMEM53-207ENST00000468117 ZNF235Q14590 738 aa20.92■□□□□ 0.94
TMEM53-207ENST00000468117 TNFAIP8L3Q5GJ75 292 aa20.92■□□□□ 0.94
TMEM53-207ENST00000468117 KDELC2Q7Z4H8 507 aa20.92■□□□□ 0.94
TMEM53-207ENST00000468117 ITFG1Q8TB96 612 aa20.92■□□□□ 0.94
TMEM53-207ENST00000468117 ZNF599Q96NL3 588 aa20.92■□□□□ 0.94
TMEM53-207ENST00000468117 TBL1YQ9BQ87 522 aa20.92■□□□□ 0.94
TMEM53-207ENST00000468117 BPTFQ12830 3046 aa20.91■□□□□ 0.94
TMEM53-207ENST00000468117 ZNF197O14709 1029 aa20.91■□□□□ 0.94
TMEM53-207ENST00000468117 MUSKO15146 869 aa20.91■□□□□ 0.94
TMEM53-207ENST00000468117 POU2F2P09086 479 aa20.91■□□□□ 0.94
TMEM53-207ENST00000468117 TPH1P17752 444 aa20.91■□□□□ 0.94
TMEM53-207ENST00000468117 CD86P42081 329 aa20.91■□□□□ 0.94
TMEM53-207ENST00000468117 GEMIN4P57678 1058 aaKnown RBP20.91■□□□□ 0.94
TMEM53-207ENST00000468117 KCNC3Q14003 757 aa20.91■□□□□ 0.94
TMEM53-207ENST00000468117 KBTBD12Q3ZCT8 623 aa20.91■□□□□ 0.94
TMEM53-207ENST00000468117 CERCAMQ5T4B2 595 aa20.91■□□□□ 0.94
TMEM53-207ENST00000468117 LINC00523Q86TU6 105 aa20.91■□□□□ 0.94
TMEM53-207ENST00000468117 MFN1Q8IWA4 741 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms