RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 PRKAG3Q9UGI9 489 aa7□□□□□ -1.29
SCAF4-204ENST00000467731 PCYOX1Q9UHG3 505 aa7□□□□□ -1.29
SCAF4-204ENST00000467731 ACTL7AQ9Y615 435 aa7□□□□□ -1.29
SCAF4-204ENST00000467731 BDP1A6H8Y1 2624 aa7□□□□□ -1.29
SCAF4-204ENST00000467731 SGK1O00141 431 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 SLU7O95391 586 aaKnown RBP6.99□□□□□ -1.29
SCAF4-204ENST00000467731 IFNB1P01574 187 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 CISD3P0C7P0 127 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 CCNCP24863 283 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 OPRD1P41143 372 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 CCNHP51946 323 aaPredicted RBP6.99□□□□□ -1.29
SCAF4-204ENST00000467731 OXCT1P55809 520 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 ARF5P84085 180 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 SLC12A1Q13621 1099 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 PITRM1Q5JRX3 1037 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 TMEM215Q68D42 235 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 FBXO38Q6PIJ6 1188 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 GSTA5Q7RTV2 222 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 PRUNE1Q86TP1 453 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 CDKL3Q8IVW4 592 aaPredicted RBP6.99□□□□□ -1.29
SCAF4-204ENST00000467731 CCDC13Q8IYE1 715 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 ALLCQ8N6M5 410 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 DCAF4L2Q8NA75 395 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 GLIS1Q8NBF1 620 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 TSGA13Q96PP4 275 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 PLEKHG4BQ96PX9 1271 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 C2orf49Q9BVC5 232 aaPredicted RBP6.99□□□□□ -1.29
SCAF4-204ENST00000467731 BRD8Q9H0E9 1235 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 PDFQ9HBH1 243 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 VPS51Q9UID3 782 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 HPCAL4Q9UM19 191 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 DRG1Q9Y295 367 aaKnown RBP6.99□□□□□ -1.29
SCAF4-204ENST00000467731 MATN3O15232 486 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 TTI1O43156 1089 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 RAD51CO43502 376 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 KDELR3O43731 214 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 PRAMEF11O60813 436 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 ZMPSTE24O75844 475 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 PEX11BO96011 259 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 STIP1P31948 543 aaKnown RBP6.99□□□□□ -1.29
SCAF4-204ENST00000467731 EIF2DP41214 584 aaKnown RBP6.99□□□□□ -1.29
SCAF4-204ENST00000467731 CLCN6P51797 869 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 PLK1P53350 603 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 DR1Q01658 176 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 KDSRQ06136 332 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 ZNF33AQ06730 810 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 IL10RBQ08334 325 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 ZBTB17Q13105 803 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 TDGQ13569 410 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 IER5LQ5T953 404 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 TIGD7Q6NT04 549 aaPredicted RBP6.99□□□□□ -1.29
SCAF4-204ENST00000467731 LINGO4Q6UY18 593 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 KIAA0907Q7Z7F0 614 aaPredicted RBP6.99□□□□□ -1.29
SCAF4-204ENST00000467731 ADIPOR2Q86V24 386 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 SFTPA1Q8IWL2 248 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 AHI1Q8N157 1196 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.99□□□□□ -1.29
SCAF4-204ENST00000467731 ATXN2LQ8WWM7 1075 aaKnown RBP6.99□□□□□ -1.29
SCAF4-204ENST00000467731 DNASE1L2Q92874 299 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 ACDQ96AP0 544 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 RPL10LQ96L21 214 aaKnown RBP6.99□□□□□ -1.29
SCAF4-204ENST00000467731 LRRC1Q9BTT6 524 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 TRPV5Q9NQA5 729 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 SLC27A6Q9Y2P4 619 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 BPTFQ12830 3046 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 A0A087WUV0 522 aaPredicted RBP6.99□□□□□ -1.29
SCAF4-204ENST00000467731 CFAP69A5D8W1 941 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 PRRT4C9JH25 899 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 MT-CO1P00395 513 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 SRFP11831 508 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 CCNB1P14635 433 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 ETS1P14921 441 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 CTHP32929 405 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 CTSOP43234 321 aaPredicted RBP6.99□□□□□ -1.29
SCAF4-204ENST00000467731 SLC10A7Q0GE19 358 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 WASHC5Q12768 1159 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 DHX34Q14147 1143 aaKnown RBP6.99□□□□□ -1.29
SCAF4-204ENST00000467731 TRIP13Q15645 432 aaPredicted RBP6.99□□□□□ -1.29
SCAF4-204ENST00000467731 GRAMD4Q6IC98 578 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 C8orf74Q6P047 294 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 TXNDC11Q6PKC3 985 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 PHTF2Q8N3S3 785 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 MMGT1Q8N4V1 131 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 CCDC89Q8N998 374 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 TERB1Q8NA31 727 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 CCDC110Q8TBZ0 833 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 USP33Q8TEY7 942 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 GRK7Q8WTQ7 553 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 SLCO2A1Q92959 643 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 EXOC4Q96A65 974 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 RUNDC3BQ96NL0 473 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 CIPCQ9C0C6 399 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 FBRSL1Q9HCM7 1045 aaKnown RBP6.99□□□□□ -1.29
SCAF4-204ENST00000467731 PIAS3Q9Y6X2 628 aa6.99□□□□□ -1.29
SCAF4-204ENST00000467731 SPECC1L-ADORA2AF8WAN1 911 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 RNF103O00237 685 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 CD160O95971 181 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 GAS8O95995 478 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 JCHAINP01591 159 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 ZSCAN5DPP0CG00 497 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms