RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 RAD51BO15315 384 aa10.49□□□□□ -0.73
HDAC3-203ENST00000467533 YY2O15391 372 aa10.49□□□□□ -0.73
HDAC3-203ENST00000467533 SPINT1O43278 529 aa10.49□□□□□ -0.73
HDAC3-203ENST00000467533 PAK4O96013 591 aaPredicted RBP10.49□□□□□ -0.73
HDAC3-203ENST00000467533 PRKCGP05129 697 aa10.49□□□□□ -0.73
HDAC3-203ENST00000467533 CTSLP07711 333 aa10.49□□□□□ -0.73
HDAC3-203ENST00000467533 PRKAR1AP10644 381 aa10.49□□□□□ -0.73
HDAC3-203ENST00000467533 NR1D1P20393 614 aa10.49□□□□□ -0.73
HDAC3-203ENST00000467533 THOP1P52888 689 aa10.49□□□□□ -0.73
HDAC3-203ENST00000467533 NUCB2P80303 420 aa10.49□□□□□ -0.73
HDAC3-203ENST00000467533 SEPT6Q14141 434 aa10.49□□□□□ -0.73
HDAC3-203ENST00000467533 DLG2Q15700 870 aa10.49□□□□□ -0.73
HDAC3-203ENST00000467533 GOLGA7BQ2TAP0 167 aa10.49□□□□□ -0.73
HDAC3-203ENST00000467533 PHF19Q5T6S3 580 aa10.49□□□□□ -0.73
HDAC3-203ENST00000467533 KIAA1161Q6NSJ0 714 aa10.49□□□□□ -0.73
HDAC3-203ENST00000467533 SV2AQ7L0J3 742 aa10.49□□□□□ -0.73
HDAC3-203ENST00000467533 CCNJLQ8IV13 435 aa10.49□□□□□ -0.73
HDAC3-203ENST00000467533 TEX19Q8NA77 164 aa10.49□□□□□ -0.73
HDAC3-203ENST00000467533 ANKRD52Q8NB46 1076 aa10.49□□□□□ -0.73
HDAC3-203ENST00000467533 GPBAR1Q8TDU6 330 aa10.49□□□□□ -0.73
HDAC3-203ENST00000467533 NKD1Q969G9 470 aa10.49□□□□□ -0.73
HDAC3-203ENST00000467533 CCDC114Q96M63 670 aa10.49□□□□□ -0.73
HDAC3-203ENST00000467533 CLIC6Q96NY7 704 aa10.49□□□□□ -0.73
HDAC3-203ENST00000467533 SLC17A9Q9BYT1 436 aa10.49□□□□□ -0.73
HDAC3-203ENST00000467533 AKAP7Q9P0M2 348 aaPredicted RBP10.49□□□□□ -0.73
HDAC3-203ENST00000467533 CGNQ9P2M7 1197 aaKnown RBP10.49□□□□□ -0.73
HDAC3-203ENST00000467533 GGT7Q9UJ14 662 aa10.49□□□□□ -0.73
HDAC3-203ENST00000467533 FBXO2Q9UK22 296 aaPredicted RBP10.49□□□□□ -0.73
HDAC3-203ENST00000467533 TP53TG5Q9Y2B4 290 aa10.49□□□□□ -0.73
HDAC3-203ENST00000467533 OTOGQ6ZRI0 2925 aa10.49□□□□□ -0.73
HDAC3-203ENST00000467533 M0QYT0 321 aa10.48□□□□□ -0.73
HDAC3-203ENST00000467533 ATP9BO43861 1147 aa10.48□□□□□ -0.73
HDAC3-203ENST00000467533 DDAH2O95865 285 aa10.48□□□□□ -0.73
HDAC3-203ENST00000467533 CELA2BP08218 269 aaPredicted RBP10.48□□□□□ -0.73
HDAC3-203ENST00000467533 LCP1P13796 627 aa10.48□□□□□ -0.73
HDAC3-203ENST00000467533 TSHRP16473 764 aa10.48□□□□□ -0.73
HDAC3-203ENST00000467533 DAOAP59103 153 aa10.48□□□□□ -0.73
HDAC3-203ENST00000467533 RPS21P63220 83 aaKnown RBP10.48□□□□□ -0.73
HDAC3-203ENST00000467533 TCEA2Q15560 299 aa10.48□□□□□ -0.73
HDAC3-203ENST00000467533 FAXCQ5TGI0 409 aa10.48□□□□□ -0.73
HDAC3-203ENST00000467533 RAP1GAP2Q684P5 730 aa10.48□□□□□ -0.73
HDAC3-203ENST00000467533 ARHGAP17Q68EM7 881 aa10.48□□□□□ -0.73
HDAC3-203ENST00000467533 ERN2Q76MJ5 926 aaKnown RBP10.48□□□□□ -0.73
HDAC3-203ENST00000467533 TMPRSS9Q7Z410 1059 aa10.48□□□□□ -0.73
HDAC3-203ENST00000467533 CIR1Q86X95 450 aaPredicted RBP10.48□□□□□ -0.73
HDAC3-203ENST00000467533 PDILTQ8N807 584 aa10.48□□□□□ -0.73
HDAC3-203ENST00000467533 Q8N9G6 341 aaPredicted RBP10.48□□□□□ -0.73
HDAC3-203ENST00000467533 GALNT11Q8NCW6 608 aa10.48□□□□□ -0.73
HDAC3-203ENST00000467533 PCDH19Q8TAB3 1148 aa10.48□□□□□ -0.73
HDAC3-203ENST00000467533 SCG3Q8WXD2 468 aaKnown RBP10.48□□□□□ -0.73
HDAC3-203ENST00000467533 MOCOSQ96EN8 888 aa10.48□□□□□ -0.73
HDAC3-203ENST00000467533 FCRL2Q96LA5 508 aaPredicted RBP10.48□□□□□ -0.73
HDAC3-203ENST00000467533 TBATAQ96M53 351 aa10.48□□□□□ -0.73
HDAC3-203ENST00000467533 BACH2Q9BYV9 841 aa10.48□□□□□ -0.73
HDAC3-203ENST00000467533 LRRC27Q9C0I9 530 aa10.48□□□□□ -0.73
HDAC3-203ENST00000467533 TNMDQ9H2S6 317 aa10.48□□□□□ -0.73
HDAC3-203ENST00000467533 NAALADL1Q9UQQ1 740 aa10.48□□□□□ -0.73
HDAC3-203ENST00000467533 RNF215Q9Y6U7 377 aa10.48□□□□□ -0.73
HDAC3-203ENST00000467533 EFCAB7A8K855 629 aa10.47□□□□□ -0.73
HDAC3-203ENST00000467533 DUX1O43812 170 aa10.47□□□□□ -0.73
HDAC3-203ENST00000467533 TACR2P21452 398 aa10.47□□□□□ -0.73
HDAC3-203ENST00000467533 GRNP28799 593 aaKnown RBP10.47□□□□□ -0.73
HDAC3-203ENST00000467533 CHRNA3P32297 505 aa10.47□□□□□ -0.73
HDAC3-203ENST00000467533 ZFP36L1Q07352 338 aaKnown RBP10.47□□□□□ -0.73
HDAC3-203ENST00000467533 BST2Q10589 180 aaKnown RBP10.47□□□□□ -0.73
HDAC3-203ENST00000467533 CDC20Q12834 499 aa10.47□□□□□ -0.73
HDAC3-203ENST00000467533 PTK2BQ14289 1009 aa10.47□□□□□ -0.73
HDAC3-203ENST00000467533 MAP9Q49MG5 647 aa10.47□□□□□ -0.73
HDAC3-203ENST00000467533 FAM114A1Q8IWE2 563 aa10.47□□□□□ -0.73
HDAC3-203ENST00000467533 CACNA2D3Q8IZS8 1091 aa10.47□□□□□ -0.73
HDAC3-203ENST00000467533 CCAR2Q8N163 923 aaKnown RBP10.47□□□□□ -0.73
HDAC3-203ENST00000467533 SH2D3CQ8N5H7 860 aa10.47□□□□□ -0.73
HDAC3-203ENST00000467533 SLC4A11Q8NBS3 891 aa10.47□□□□□ -0.73
HDAC3-203ENST00000467533 CCDC150Q8NCX0 1101 aa10.47□□□□□ -0.73
HDAC3-203ENST00000467533 GRIN3AQ8TCU5 1115 aa10.47□□□□□ -0.73
HDAC3-203ENST00000467533 APOBEC4Q8WW27 367 aaKnown RBP10.47□□□□□ -0.73
HDAC3-203ENST00000467533 PPP1R16AQ96I34 528 aa10.47□□□□□ -0.73
HDAC3-203ENST00000467533 SERPINB11Q96P15 392 aa10.47□□□□□ -0.73
HDAC3-203ENST00000467533 EPAS1Q99814 870 aa10.47□□□□□ -0.73
HDAC3-203ENST00000467533 B3GNT4Q9C0J1 378 aa10.47□□□□□ -0.73
HDAC3-203ENST00000467533 CLPBQ9H078 707 aa10.47□□□□□ -0.73
HDAC3-203ENST00000467533 CASS4Q9NQ75 786 aa10.47□□□□□ -0.73
HDAC3-203ENST00000467533 CNGB3Q9NQW8 809 aa10.47□□□□□ -0.73
HDAC3-203ENST00000467533 HESX1Q9UBX0 185 aa10.47□□□□□ -0.73
HDAC3-203ENST00000467533 TSPAN16Q9UKR8 245 aa10.47□□□□□ -0.73
HDAC3-203ENST00000467533 SRPRBQ9Y5M8 271 aaKnown RBP10.47□□□□□ -0.73
HDAC3-203ENST00000467533 MED13Q9UHV7 2174 aa10.47□□□□□ -0.73
HDAC3-203ENST00000467533 F5H5T6 163 aa10.46□□□□□ -0.73
HDAC3-203ENST00000467533 PIK3R2O00459 728 aa10.46□□□□□ -0.73
HDAC3-203ENST00000467533 NKX2-8O15522 239 aa10.46□□□□□ -0.73
HDAC3-203ENST00000467533 CLDN1O95832 211 aa10.46□□□□□ -0.73
HDAC3-203ENST00000467533 APOEP02649 317 aa10.46□□□□□ -0.73
HDAC3-203ENST00000467533 LTFP02788 710 aa10.46□□□□□ -0.73
HDAC3-203ENST00000467533 PRNPP04156 253 aa10.46□□□□□ -0.73
HDAC3-203ENST00000467533 PRR29P0C7W0 189 aa10.46□□□□□ -0.73
HDAC3-203ENST00000467533 RECQLP46063 649 aaPredicted RBP10.46□□□□□ -0.73
HDAC3-203ENST00000467533 VASPP50552 380 aaPredicted RBP10.46□□□□□ -0.73
HDAC3-203ENST00000467533 NEK3P51956 506 aa10.46□□□□□ -0.73
HDAC3-203ENST00000467533 RAD23BP54727 409 aa10.46□□□□□ -0.73
HDAC3-203ENST00000467533 PFN3P60673 137 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms