RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 ZBTB10Q96DT7 871 aa4.08□□□□□ -1.76
VPS50-209ENST00000467326 CDHR1Q96JP9 859 aa4.08□□□□□ -1.76
VPS50-209ENST00000467326 SEC62Q99442 399 aaKnown RBP4.08□□□□□ -1.76
VPS50-209ENST00000467326 DDX23Q9BUQ8 820 aaKnown RBP4.08□□□□□ -1.76
VPS50-209ENST00000467326 SLC26A6Q9BXS9 759 aa4.08□□□□□ -1.76
VPS50-209ENST00000467326 TRIM31Q9BZY9 425 aa4.08□□□□□ -1.76
VPS50-209ENST00000467326 ARHGAP39Q9C0H5 1083 aa4.08□□□□□ -1.76
VPS50-209ENST00000467326 CLPBQ9H078 707 aa4.08□□□□□ -1.76
VPS50-209ENST00000467326 ZNF304Q9HCX3 659 aa4.08□□□□□ -1.76
VPS50-209ENST00000467326 Q9N2J8 555 aa4.08□□□□□ -1.76
VPS50-209ENST00000467326 PNRC2Q9NPJ4 139 aaKnown RBP4.08□□□□□ -1.76
VPS50-209ENST00000467326 RRN3Q9NYV6 651 aa4.08□□□□□ -1.76
VPS50-209ENST00000467326 PDP2Q9P2J9 529 aa4.08□□□□□ -1.76
VPS50-209ENST00000467326 TBC1D14Q9P2M4 693 aa4.08□□□□□ -1.76
VPS50-209ENST00000467326 TCRBV7S3A2A0A539 114 aa4.07□□□□□ -1.76
VPS50-209ENST00000467326 GAGE12JA6NER3 117 aa4.07□□□□□ -1.76
VPS50-209ENST00000467326 IPO5O00410 1097 aaKnown RBP4.07□□□□□ -1.76
VPS50-209ENST00000467326 SPTLC2O15270 562 aa4.07□□□□□ -1.76
VPS50-209ENST00000467326 KLKB1P03952 638 aa4.07□□□□□ -1.76
VPS50-209ENST00000467326 CBSLP0DN79 551 aa4.07□□□□□ -1.76
VPS50-209ENST00000467326 PKMP14618 531 aaKnown RBP4.07□□□□□ -1.76
VPS50-209ENST00000467326 HOXB9P17482 250 aaPredicted RBP4.07□□□□□ -1.76
VPS50-209ENST00000467326 GSTM2P28161 218 aa4.07□□□□□ -1.76
VPS50-209ENST00000467326 CST5P28325 142 aaPredicted RBP4.07□□□□□ -1.76
VPS50-209ENST00000467326 CBSP35520 551 aa4.07□□□□□ -1.76
VPS50-209ENST00000467326 MCM2P49736 904 aa4.07□□□□□ -1.76
VPS50-209ENST00000467326 THBS3P49746 956 aa4.07□□□□□ -1.76
VPS50-209ENST00000467326 PGGT1BP53609 377 aa4.07□□□□□ -1.76
VPS50-209ENST00000467326 PRKAA2P54646 552 aa4.07□□□□□ -1.76
VPS50-209ENST00000467326 KRTAP10-6P60371 365 aaPredicted RBP4.07□□□□□ -1.76
VPS50-209ENST00000467326 DCTN1Q14203 1278 aa4.07□□□□□ -1.76
VPS50-209ENST00000467326 TAF12Q16514 161 aa4.07□□□□□ -1.76
VPS50-209ENST00000467326 C16orf54Q6UWD8 224 aa4.07□□□□□ -1.76
VPS50-209ENST00000467326 PARM1Q6UWI2 310 aa4.07□□□□□ -1.76
VPS50-209ENST00000467326 SYT13Q7L8C5 426 aa4.07□□□□□ -1.76
VPS50-209ENST00000467326 RNF144BQ7Z419 303 aa4.07□□□□□ -1.76
VPS50-209ENST00000467326 GPSM1Q86YR5 675 aa4.07□□□□□ -1.76
VPS50-209ENST00000467326 HSCBQ8IWL3 235 aa4.07□□□□□ -1.76
VPS50-209ENST00000467326 SCN4BQ8IWT1 228 aa4.07□□□□□ -1.76
VPS50-209ENST00000467326 FAM185AQ8N0U4 392 aa4.07□□□□□ -1.76
VPS50-209ENST00000467326 DPP10Q8N608 796 aa4.07□□□□□ -1.76
VPS50-209ENST00000467326 TMEM217Q8N7C4 229 aa4.07□□□□□ -1.76
VPS50-209ENST00000467326 PTGR2Q8N8N7 351 aaPredicted RBP4.07□□□□□ -1.76
VPS50-209ENST00000467326 RUBCNQ92622 972 aa4.07□□□□□ -1.76
VPS50-209ENST00000467326 MARK4Q96L34 752 aa4.07□□□□□ -1.76
VPS50-209ENST00000467326 CAMK1GQ96NX5 476 aa4.07□□□□□ -1.76
VPS50-209ENST00000467326 SAYSD1Q9NPB0 183 aa4.07□□□□□ -1.76
VPS50-209ENST00000467326 KRCC1Q9NPI7 259 aaPredicted RBP4.07□□□□□ -1.76
VPS50-209ENST00000467326 G6PC2Q9NQR9 355 aa4.07□□□□□ -1.76
VPS50-209ENST00000467326 SLC22A11Q9NSA0 550 aa4.07□□□□□ -1.76
VPS50-209ENST00000467326 TMEM248Q9NWD8 314 aa4.07□□□□□ -1.76
VPS50-209ENST00000467326 IGKV2D-30A0A075B6S6 120 aa4.06□□□□□ -1.76
VPS50-209ENST00000467326 TRBV5-7A0A0A0MS05 114 aa4.06□□□□□ -1.76
VPS50-209ENST00000467326 FAM90A20PA6NIJ5 464 aa4.06□□□□□ -1.76
VPS50-209ENST00000467326 TNFRSF13BO14836 293 aaPredicted RBP4.06□□□□□ -1.76
VPS50-209ENST00000467326 NCAM2O15394 837 aa4.06□□□□□ -1.76
VPS50-209ENST00000467326 CCNT1O60563 726 aaKnown RBP4.06□□□□□ -1.76
VPS50-209ENST00000467326 HMMRO75330 724 aa4.06□□□□□ -1.76
VPS50-209ENST00000467326 LYL1P12980 280 aa4.06□□□□□ -1.76
VPS50-209ENST00000467326 CAPN3P20807 821 aa4.06□□□□□ -1.76
VPS50-209ENST00000467326 KLRC2P26717 231 aa4.06□□□□□ -1.76
VPS50-209ENST00000467326 ELF1P32519 619 aa4.06□□□□□ -1.76
VPS50-209ENST00000467326 KRT9P35527 623 aa4.06□□□□□ -1.76
VPS50-209ENST00000467326 SLC16A2P36021 539 aa4.06□□□□□ -1.76
VPS50-209ENST00000467326 CLK1P49759 484 aaKnown RBP4.06□□□□□ -1.76
VPS50-209ENST00000467326 NANOS2P60321 138 aaKnown RBP4.06□□□□□ -1.76
VPS50-209ENST00000467326 PRKG1Q13976 671 aa4.06□□□□□ -1.76
VPS50-209ENST00000467326 PSMD6Q15008 389 aa4.06□□□□□ -1.76
VPS50-209ENST00000467326 SMAD1Q15797 465 aaKnown RBP4.06□□□□□ -1.76
VPS50-209ENST00000467326 C5orf22Q49AR2 442 aa4.06□□□□□ -1.76
VPS50-209ENST00000467326 LRRC24Q50LG9 513 aa4.06□□□□□ -1.76
VPS50-209ENST00000467326 Q5PR19 223 aa4.06□□□□□ -1.76
VPS50-209ENST00000467326 ITPRIPL1Q6GPH6 555 aa4.06□□□□□ -1.76
VPS50-209ENST00000467326 JMJD6Q6NYC1 403 aaPredicted RBP4.06□□□□□ -1.76
VPS50-209ENST00000467326 GALNT7Q86SF2 657 aa4.06□□□□□ -1.76
VPS50-209ENST00000467326 MYCT1Q8N699 235 aa4.06□□□□□ -1.76
VPS50-209ENST00000467326 LRRC57Q8N9N7 239 aa4.06□□□□□ -1.76
VPS50-209ENST00000467326 FSIP1Q8NA03 581 aa4.06□□□□□ -1.76
VPS50-209ENST00000467326 C7orf57Q8NEG2 295 aa4.06□□□□□ -1.76
VPS50-209ENST00000467326 CMASQ8NFW8 434 aaPredicted RBP4.06□□□□□ -1.76
VPS50-209ENST00000467326 TRAPPC12Q8WVT3 735 aa4.06□□□□□ -1.76
VPS50-209ENST00000467326 THAP4Q8WY91 577 aa4.06□□□□□ -1.76
VPS50-209ENST00000467326 INPP5DQ92835 1189 aa4.06□□□□□ -1.76
VPS50-209ENST00000467326 USP13Q92995 863 aaPredicted RBP4.06□□□□□ -1.76
VPS50-209ENST00000467326 LYZL4Q96KX0 146 aa4.06□□□□□ -1.76
VPS50-209ENST00000467326 MYCBPQ99417 103 aaPredicted RBP4.06□□□□□ -1.76
VPS50-209ENST00000467326 TAF1DQ9H5J8 278 aaPredicted RBP4.06□□□□□ -1.76
VPS50-209ENST00000467326 SIRT3Q9NTG7 399 aaPredicted RBP4.06□□□□□ -1.76
VPS50-209ENST00000467326 BLOC1S4Q9NUP1 217 aa4.06□□□□□ -1.76
VPS50-209ENST00000467326 SRP68Q9UHB9 627 aaKnown RBP4.06□□□□□ -1.76
VPS50-209ENST00000467326 GJD2Q9UKL4 321 aa4.06□□□□□ -1.76
VPS50-209ENST00000467326 ODF2LQ9ULJ1 636 aa4.06□□□□□ -1.76
VPS50-209ENST00000467326 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.05□□□□□ -1.76
VPS50-209ENST00000467326 RPS10-NUDT3A0A1W2PQS6 291 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 TMEM247A6NEH6 219 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 E7EVH7 732 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 SYN3O14994 580 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 SEPT4O43236 478 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 SMAD6O43541 496 aaKnown RBP4.05□□□□□ -1.76
VPS50-209ENST00000467326 PLOD3O60568 738 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms