RNA–Protein interactions for RNA: ENST00000467080.1

RBM17-208, Transcript of RNA binding motif protein 17, human

TSL 2

Gene RBM17, Length 837 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM17-208	ENST00000467080	MAGED2	Q9UNF1	606 aa	Predicted RBP	6.11	□□□□□ -1.43
RBM17-208	ENST00000467080	BTBD3	Q9Y2F9	522 aa		6.11	□□□□□ -1.43
RBM17-208	ENST00000467080	LRCH1	Q9Y2L9	728 aa		6.11	□□□□□ -1.43
RBM17-208	ENST00000467080	COL2A1	P02458	1487 aa	Predicted RBP	6.1	□□□□□ -1.43
RBM17-208	ENST00000467080	AQP12B	A6NM10	295 aa		6.1	□□□□□ -1.43
RBM17-208	ENST00000467080	TCP10L2	B9ZVM9	353 aa		6.1	□□□□□ -1.43
RBM17-208	ENST00000467080	TP73	O15350	636 aa		6.1	□□□□□ -1.43
RBM17-208	ENST00000467080	FFAR2	O15552	330 aa		6.1	□□□□□ -1.43
RBM17-208	ENST00000467080	NPPB	P16860	134 aa		6.1	□□□□□ -1.43
RBM17-208	ENST00000467080	MATN1	P21941	496 aa		6.1	□□□□□ -1.43
RBM17-208	ENST00000467080	VPS41	P49754	854 aa		6.1	□□□□□ -1.43
RBM17-208	ENST00000467080	RIPK4	P57078	832 aa		6.1	□□□□□ -1.43
RBM17-208	ENST00000467080	LRIT3	Q3SXY7	679 aa		6.1	□□□□□ -1.43
RBM17-208	ENST00000467080	C10orf62	Q5T681	223 aa	Predicted RBP	6.1	□□□□□ -1.43
RBM17-208	ENST00000467080	MORN5	Q5VZ52	161 aa		6.1	□□□□□ -1.43
RBM17-208	ENST00000467080	KYAT3	Q6YP21	454 aa	Known RBP	6.1	□□□□□ -1.43
RBM17-208	ENST00000467080	PRPF18	Q99633	342 aa	Known RBP	6.1	□□□□□ -1.43
RBM17-208	ENST00000467080	CDCP1	Q9H5V8	836 aa		6.1	□□□□□ -1.43
RBM17-208	ENST00000467080	FBXO28	Q9NVF7	368 aa		6.1	□□□□□ -1.43
RBM17-208	ENST00000467080	DAAM1	Q9Y4D1	1078 aa		6.1	□□□□□ -1.43
RBM17-208	ENST00000467080	LAS1L	Q9Y4W2	734 aa	Known RBP	6.1	□□□□□ -1.43
RBM17-208	ENST00000467080	TCF20	Q9UGU0	1960 aa	Known RBP	6.09	□□□□□ -1.43
RBM17-208	ENST00000467080	MYO9B	Q13459	2157 aa		6.09	□□□□□ -1.43
RBM17-208	ENST00000467080		A0A087WV62	115 aa		6.09	□□□□□ -1.43
RBM17-208	ENST00000467080	ABHD14A-ACY1	A0A1B0GW23	586 aa		6.09	□□□□□ -1.43
RBM17-208	ENST00000467080	GOLGA6L3	A6NEY3	463 aa		6.09	□□□□□ -1.43
RBM17-208	ENST00000467080	TTC34	A8MYJ7	566 aa		6.09	□□□□□ -1.43
RBM17-208	ENST00000467080	PRY	O14603	147 aa		6.09	□□□□□ -1.43
RBM17-208	ENST00000467080	RRH	O14718	337 aa		6.09	□□□□□ -1.43
RBM17-208	ENST00000467080	TFRC	P02786	760 aa	Known RBP	6.09	□□□□□ -1.43
RBM17-208	ENST00000467080	IGKV5-2	P06315	115 aa		6.09	□□□□□ -1.43
RBM17-208	ENST00000467080	SLC3A2	P08195	630 aa	Known RBP	6.09	□□□□□ -1.43
RBM17-208	ENST00000467080	TACR3	P29371	465 aa		6.09	□□□□□ -1.43
RBM17-208	ENST00000467080	ZNF81	P51508	661 aa		6.09	□□□□□ -1.43
RBM17-208	ENST00000467080	GHRHR	Q02643	423 aa		6.09	□□□□□ -1.43
RBM17-208	ENST00000467080	KLF9	Q13886	244 aa	Predicted RBP	6.09	□□□□□ -1.43
RBM17-208	ENST00000467080	ZRSR2	Q15696	482 aa	Known RBP	6.09	□□□□□ -1.43
RBM17-208	ENST00000467080	C16orf89	Q6UX73	402 aa		6.09	□□□□□ -1.43
RBM17-208	ENST00000467080	TFAP2D	Q7Z6R9	452 aa		6.09	□□□□□ -1.43
RBM17-208	ENST00000467080	TDH	Q8IZJ6	230 aa		6.09	□□□□□ -1.43
RBM17-208	ENST00000467080	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	6.09	□□□□□ -1.43
RBM17-208	ENST00000467080	ZNF527	Q8NB42	609 aa		6.09	□□□□□ -1.43
RBM17-208	ENST00000467080	SLC22A17	Q8WUG5	538 aa		6.09	□□□□□ -1.43
RBM17-208	ENST00000467080	MCRS1	Q96EZ8	462 aa		6.09	□□□□□ -1.43
RBM17-208	ENST00000467080	ZNF778	Q96MU6	729 aa		6.09	□□□□□ -1.43
RBM17-208	ENST00000467080	RNF26	Q9BY78	433 aa	Predicted RBP	6.09	□□□□□ -1.43
RBM17-208	ENST00000467080	OBP2B	Q9NPH6	170 aa		6.09	□□□□□ -1.43
RBM17-208	ENST00000467080	ASNSD1	Q9NWL6	643 aa		6.09	□□□□□ -1.43
RBM17-208	ENST00000467080	PCDHB7	Q9Y5E2	793 aa		6.09	□□□□□ -1.43
RBM17-208	ENST00000467080	MYH13	Q9UKX3	1938 aa		6.09	□□□□□ -1.44
RBM17-208	ENST00000467080	DOCK2	Q92608	1830 aa		6.09	□□□□□ -1.44
RBM17-208	ENST00000467080	REV3L	O60673	3130 aa		6.08	□□□□□ -1.44
RBM17-208	ENST00000467080	PFAS	O15067	1338 aa		6.08	□□□□□ -1.44
RBM17-208	ENST00000467080	PDHX	O00330	501 aa		6.08	□□□□□ -1.44
RBM17-208	ENST00000467080	CHL1	O00533	1208 aa		6.08	□□□□□ -1.44
RBM17-208	ENST00000467080	ASNA1	O43681	348 aa		6.08	□□□□□ -1.44
RBM17-208	ENST00000467080	CER1	O95813	267 aa		6.08	□□□□□ -1.44
RBM17-208	ENST00000467080	CETP	P11597	493 aa		6.08	□□□□□ -1.44
RBM17-208	ENST00000467080	NDUFS1	P28331	727 aa		6.08	□□□□□ -1.44
RBM17-208	ENST00000467080	AGTR2	P50052	363 aa		6.08	□□□□□ -1.44
RBM17-208	ENST00000467080	RBM5	P52756	815 aa	Known RBP eCLIP	6.08	□□□□□ -1.44
RBM17-208	ENST00000467080	ALDH18A1	P54886	795 aa	Known RBP	6.08	□□□□□ -1.44
RBM17-208	ENST00000467080	PRMT2	P55345	433 aa		6.08	□□□□□ -1.44
RBM17-208	ENST00000467080	TNFAIP2	Q03169	654 aa		6.08	□□□□□ -1.44
RBM17-208	ENST00000467080	CHRND	Q07001	517 aa		6.08	□□□□□ -1.44
RBM17-208	ENST00000467080	SPARCL1	Q14515	664 aa		6.08	□□□□□ -1.44
RBM17-208	ENST00000467080	ARHGEF6	Q15052	776 aa		6.08	□□□□□ -1.44
RBM17-208	ENST00000467080	FAM110C	Q1W6H9	321 aa		6.08	□□□□□ -1.44
RBM17-208	ENST00000467080	TRIM71	Q2Q1W2	868 aa	Known RBP	6.08	□□□□□ -1.44
RBM17-208	ENST00000467080	GRAMD1B	Q3KR37	738 aa		6.08	□□□□□ -1.44
RBM17-208	ENST00000467080	C1orf228	Q6PIY5	440 aa		6.08	□□□□□ -1.44
RBM17-208	ENST00000467080	STYX	Q8WUJ0	223 aa		6.08	□□□□□ -1.44
RBM17-208	ENST00000467080	GLMP	Q8WWB7	406 aa		6.08	□□□□□ -1.44
RBM17-208	ENST00000467080	NPIPB3	Q92617	1050 aa		6.08	□□□□□ -1.44
RBM17-208	ENST00000467080	RPL36AL	Q969Q0	106 aa	Known RBP	6.08	□□□□□ -1.44
RBM17-208	ENST00000467080	PAAF1	Q9BRP4	392 aa		6.08	□□□□□ -1.44
RBM17-208	ENST00000467080	ELOVL1	Q9BW60	279 aa		6.08	□□□□□ -1.44
RBM17-208	ENST00000467080	TM2D2	Q9BX73	214 aa		6.08	□□□□□ -1.44
RBM17-208	ENST00000467080	AGO4	Q9HCK5	861 aa	Known RBP	6.08	□□□□□ -1.44
RBM17-208	ENST00000467080	CWC25	Q9NXE8	425 aa	Predicted RBP	6.08	□□□□□ -1.44
RBM17-208	ENST00000467080	RNF7	Q9UBF6	113 aa		6.08	□□□□□ -1.44
RBM17-208	ENST00000467080	SIRT4	Q9Y6E7	314 aa	Predicted RBP	6.08	□□□□□ -1.44
RBM17-208	ENST00000467080	MAPK8IP3	Q9UPT6	1336 aa		6.07	□□□□□ -1.44
RBM17-208	ENST00000467080	ATAD5	Q96QE3	1844 aa		6.07	□□□□□ -1.44
RBM17-208	ENST00000467080	GXYLT2	A0PJZ3	443 aa		6.07	□□□□□ -1.44
RBM17-208	ENST00000467080	LGALS16	A8MUM7	142 aa		6.07	□□□□□ -1.44
RBM17-208	ENST00000467080		E5RJQ4	531 aa		6.07	□□□□□ -1.44
RBM17-208	ENST00000467080	INPPL1	O15357	1258 aa		6.07	□□□□□ -1.44
RBM17-208	ENST00000467080	DNPH1	O43598	174 aa		6.07	□□□□□ -1.44
RBM17-208	ENST00000467080	HOXD12	P35452	270 aa		6.07	□□□□□ -1.44
RBM17-208	ENST00000467080	IDUA	P35475	653 aa		6.07	□□□□□ -1.44
RBM17-208	ENST00000467080	TMPO	P42166	694 aa	Known RBP	6.07	□□□□□ -1.44
RBM17-208	ENST00000467080	UBXN2A	P68543	259 aa		6.07	□□□□□ -1.44
RBM17-208	ENST00000467080	PPIL2	Q13356	520 aa		6.07	□□□□□ -1.44
RBM17-208	ENST00000467080	CBFB	Q13951	182 aa		6.07	□□□□□ -1.44
RBM17-208	ENST00000467080	ETFDH	Q16134	617 aa		6.07	□□□□□ -1.44
RBM17-208	ENST00000467080		Q4G0T1	1027 aa		6.07	□□□□□ -1.44
RBM17-208	ENST00000467080	ANO7	Q6IWH7	933 aa		6.07	□□□□□ -1.44
RBM17-208	ENST00000467080	RINT1	Q6NUQ1	792 aa		6.07	□□□□□ -1.44
RBM17-208	ENST00000467080	PGBD2	Q6P3X8	592 aa		6.07	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms