RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 CD248Q9HCU0 757 aa14.16□□□□□ -0.14
UBA3-209ENST00000466763 IPO11Q9UI26 975 aaKnown RBP14.16□□□□□ -0.14
UBA3-209ENST00000466763 PPP2R2CQ9Y2T4 447 aa14.16□□□□□ -0.14
UBA3-209ENST00000466763 SHROOM3Q8TF72 1996 aa14.16□□□□□ -0.14
UBA3-209ENST00000466763 EML5Q05BV3 1969 aa14.15□□□□□ -0.14
UBA3-209ENST00000466763 APOL1O14791 398 aa14.15□□□□□ -0.14
UBA3-209ENST00000466763 MFSD11O43934 449 aa14.15□□□□□ -0.14
UBA3-209ENST00000466763 PRAMEF11O60813 436 aa14.15□□□□□ -0.14
UBA3-209ENST00000466763 TMCC1O94876 653 aa14.15□□□□□ -0.14
UBA3-209ENST00000466763 RHOAP61586 193 aa14.15□□□□□ -0.14
UBA3-209ENST00000466763 RPS14P62263 151 aaKnown RBP14.15□□□□□ -0.14
UBA3-209ENST00000466763 BYSLQ13895 437 aaKnown RBP14.15□□□□□ -0.14
UBA3-209ENST00000466763 ELAVL3Q14576 367 aaKnown RBP14.15□□□□□ -0.14
UBA3-209ENST00000466763 LPAL2Q16609 132 aa14.15□□□□□ -0.14
UBA3-209ENST00000466763 AFMIDQ63HM1 303 aa14.15□□□□□ -0.14
UBA3-209ENST00000466763 NCBP2-AS2Q69YL0 99 aa14.15□□□□□ -0.14
UBA3-209ENST00000466763 SPOCD1Q6ZMY3 1216 aa14.15□□□□□ -0.14
UBA3-209ENST00000466763 DSG4Q86SJ6 1040 aa14.15□□□□□ -0.14
UBA3-209ENST00000466763 FAM124AQ86V42 546 aa14.15□□□□□ -0.14
UBA3-209ENST00000466763 KATNAL2Q8IYT4 538 aa14.15□□□□□ -0.14
UBA3-209ENST00000466763 RCOR2Q8IZ40 523 aa14.15□□□□□ -0.14
UBA3-209ENST00000466763 ATPAF2Q8N5M1 289 aa14.15□□□□□ -0.14
UBA3-209ENST00000466763 FAM160A2Q8N612 972 aaPredicted RBP14.15□□□□□ -0.14
UBA3-209ENST00000466763 PQLC3Q8N755 202 aa14.15□□□□□ -0.14
UBA3-209ENST00000466763 LRRC57Q8N9N7 239 aa14.15□□□□□ -0.14
UBA3-209ENST00000466763 GAB3Q8WWW8 586 aa14.15□□□□□ -0.14
UBA3-209ENST00000466763 RBM41Q96IZ5 413 aaKnown RBP14.15□□□□□ -0.14
UBA3-209ENST00000466763 FAM129BQ96TA1 746 aa14.15□□□□□ -0.14
UBA3-209ENST00000466763 CEP44Q9C0F1 390 aa14.15□□□□□ -0.14
UBA3-209ENST00000466763 KCNF1Q9H3M0 494 aa14.15□□□□□ -0.14
UBA3-209ENST00000466763 CD93Q9NPY3 652 aa14.15□□□□□ -0.14
UBA3-209ENST00000466763 RAB23Q9ULC3 237 aa14.15□□□□□ -0.14
UBA3-209ENST00000466763 PACSIN2Q9UNF0 486 aaPredicted RBP14.15□□□□□ -0.14
UBA3-209ENST00000466763 PCDHA3Q9Y5H8 950 aa14.15□□□□□ -0.14
UBA3-209ENST00000466763 HEY1Q9Y5J3 304 aa14.15□□□□□ -0.14
UBA3-209ENST00000466763 CAPN6Q9Y6Q1 641 aa14.15□□□□□ -0.14
UBA3-209ENST00000466763 NYNRINQ9P2P1 1898 aaKnown RBP14.14□□□□□ -0.15
UBA3-209ENST00000466763 ABCA7Q8IZY2 2146 aa14.14□□□□□ -0.15
UBA3-209ENST00000466763 CCDC66A2RUB6 948 aa14.14□□□□□ -0.15
UBA3-209ENST00000466763 C3orf70A6NLC5 250 aaPredicted RBP14.14□□□□□ -0.15
UBA3-209ENST00000466763 MID1O15344 667 aa14.14□□□□□ -0.15
UBA3-209ENST00000466763 ZNF217O75362 1048 aa14.14□□□□□ -0.15
UBA3-209ENST00000466763 CD160O95971 181 aa14.14□□□□□ -0.15
UBA3-209ENST00000466763 KRT10P13645 584 aa14.14□□□□□ -0.15
UBA3-209ENST00000466763 CTNNA2P26232 953 aa14.14□□□□□ -0.15
UBA3-209ENST00000466763 SLC8A1P32418 973 aa14.14□□□□□ -0.15
UBA3-209ENST00000466763 CNR2P34972 360 aa14.14□□□□□ -0.15
UBA3-209ENST00000466763 CTNNA1P35221 906 aaKnown RBP14.14□□□□□ -0.15
UBA3-209ENST00000466763 CETN2P41208 172 aa14.14□□□□□ -0.15
UBA3-209ENST00000466763 RWDD2BP57060 319 aa14.14□□□□□ -0.15
UBA3-209ENST00000466763 NHLH1Q02575 133 aa14.14□□□□□ -0.15
UBA3-209ENST00000466763 IL10RBQ08334 325 aa14.14□□□□□ -0.15
UBA3-209ENST00000466763 CCDC173Q0VFZ6 552 aa14.14□□□□□ -0.15
UBA3-209ENST00000466763 PAFAH1B3Q15102 231 aaKnown RBP14.14□□□□□ -0.15
UBA3-209ENST00000466763 CST6Q15828 149 aa14.14□□□□□ -0.15
UBA3-209ENST00000466763 POM121L1PQ3SYA9 428 aa14.14□□□□□ -0.15
UBA3-209ENST00000466763 TTC31Q49AM3 519 aaPredicted RBP14.14□□□□□ -0.15
UBA3-209ENST00000466763 CARD16Q5EG05 197 aa14.14□□□□□ -0.15
UBA3-209ENST00000466763 DPY19L3Q6ZPD9 716 aa14.14□□□□□ -0.15
UBA3-209ENST00000466763 NT5DC3Q86UY8 548 aa14.14□□□□□ -0.15
UBA3-209ENST00000466763 PCDH20Q8N6Y1 951 aaKnown RBP14.14□□□□□ -0.15
UBA3-209ENST00000466763 UBL4BQ8N7F7 174 aa14.14□□□□□ -0.15
UBA3-209ENST00000466763 FRMD1Q8N878 549 aa14.14□□□□□ -0.15
UBA3-209ENST00000466763 CHST14Q8NCH0 376 aa14.14□□□□□ -0.15
UBA3-209ENST00000466763 CCNYQ8ND76 341 aa14.14□□□□□ -0.15
UBA3-209ENST00000466763 OR6K2Q8NGY2 324 aa14.14□□□□□ -0.15
UBA3-209ENST00000466763 EXD1Q8NHP7 514 aa14.14□□□□□ -0.15
UBA3-209ENST00000466763 NSMCE1Q8WV22 266 aa14.14□□□□□ -0.15
UBA3-209ENST00000466763 FAF2Q96CS3 445 aa14.14□□□□□ -0.15
UBA3-209ENST00000466763 OMDQ99983 421 aa14.14□□□□□ -0.15
UBA3-209ENST00000466763 HEMGNQ9BXL5 484 aa14.14□□□□□ -0.15
UBA3-209ENST00000466763 RSPH9Q9H1X1 276 aaPredicted RBP14.14□□□□□ -0.15
UBA3-209ENST00000466763 NCKAP1Q9Y2A7 1128 aa14.14□□□□□ -0.15
UBA3-209ENST00000466763 FANCMQ8IYD8 2048 aa14.14□□□□□ -0.15
UBA3-209ENST00000466763 C1QTNF3-AMACRE9PGA6 284 aa14.13□□□□□ -0.15
UBA3-209ENST00000466763 MCF2LO15068 1137 aa14.13□□□□□ -0.15
UBA3-209ENST00000466763 ZSCAN12O43309 604 aa14.13□□□□□ -0.15
UBA3-209ENST00000466763 CST8O60676 142 aa14.13□□□□□ -0.15
UBA3-209ENST00000466763 LILRB5O75023 590 aa14.13□□□□□ -0.15
UBA3-209ENST00000466763 NDUFS2O75306 463 aa14.13□□□□□ -0.15
UBA3-209ENST00000466763 ZFXP17010 805 aaPredicted RBP14.13□□□□□ -0.15
UBA3-209ENST00000466763 CHRNA3P32297 505 aa14.13□□□□□ -0.15
UBA3-209ENST00000466763 P2RY2P41231 377 aa14.13□□□□□ -0.15
UBA3-209ENST00000466763 CDKN2BP42772 138 aa14.13□□□□□ -0.15
UBA3-209ENST00000466763 SNRPD1P62314 119 aaKnown RBP14.13□□□□□ -0.15
UBA3-209ENST00000466763 GBE1Q04446 702 aa14.13□□□□□ -0.15
UBA3-209ENST00000466763 TFDP2Q14188 446 aa14.13□□□□□ -0.15
UBA3-209ENST00000466763 CYTH1Q15438 398 aa14.13□□□□□ -0.15
UBA3-209ENST00000466763 INO80DQ53TQ3 878 aaPredicted RBP14.13□□□□□ -0.15
UBA3-209ENST00000466763 TFDP3Q5H9I0 405 aa14.13□□□□□ -0.15
UBA3-209ENST00000466763 ATXN7L2Q5T6C5 722 aaPredicted RBP14.13□□□□□ -0.15
UBA3-209ENST00000466763 CCDC181Q5TID7 509 aa14.13□□□□□ -0.15
UBA3-209ENST00000466763 FAM46CQ5VWP2 391 aa14.13□□□□□ -0.15
UBA3-209ENST00000466763 NPNTQ6UXI9 565 aa14.13□□□□□ -0.15
UBA3-209ENST00000466763 METTL3Q86U44 580 aaKnown RBP14.13□□□□□ -0.15
UBA3-209ENST00000466763 DEFB119Q8N690 84 aa14.13□□□□□ -0.15
UBA3-209ENST00000466763 OR2A12Q8NGT7 310 aa14.13□□□□□ -0.15
UBA3-209ENST00000466763 PIP4K2CQ8TBX8 421 aa14.13□□□□□ -0.15
UBA3-209ENST00000466763 GRIN3AQ8TCU5 1115 aa14.13□□□□□ -0.15
UBA3-209ENST00000466763 LRRN4Q8WUT4 740 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms