RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 RTP3Q9BQQ7 232 aa16.62■□□□□ 0.25
SLX4-202ENST00000466154 SLC39A8Q9C0K1 460 aa16.62■□□□□ 0.25
SLX4-202ENST00000466154 TRHDEQ9UKU6 1024 aa16.62■□□□□ 0.25
SLX4-202ENST00000466154 CDY1Q9Y6F8 540 aa16.62■□□□□ 0.25
SLX4-202ENST00000466154 A0A088AWK7 358 aa16.61■□□□□ 0.25
SLX4-202ENST00000466154 G3V2L1 256 aa16.61■□□□□ 0.25
SLX4-202ENST00000466154 SMNDC1O75940 238 aaKnown RBP eCLIP16.61■□□□□ 0.25
SLX4-202ENST00000466154 CXCR3P49682 368 aa16.61■□□□□ 0.25
SLX4-202ENST00000466154 NUDT2P50583 147 aa16.61■□□□□ 0.25
SLX4-202ENST00000466154 TRMT5Q32P41 509 aaKnown RBP16.61■□□□□ 0.25
SLX4-202ENST00000466154 ZNF470Q6ECI4 717 aa16.61■□□□□ 0.25
SLX4-202ENST00000466154 CASP10Q92851 521 aa16.61■□□□□ 0.25
SLX4-202ENST00000466154 CATSPER2Q96P56 530 aa16.61■□□□□ 0.25
SLX4-202ENST00000466154 CDH19Q9H159 772 aa16.61■□□□□ 0.25
SLX4-202ENST00000466154 LAMA2P24043 3122 aaKnown RBP16.61■□□□□ 0.25
SLX4-202ENST00000466154 ENO4A6NNW6 628 aa16.61■□□□□ 0.25
SLX4-202ENST00000466154 TMEM233B4DJY2 109 aa16.61■□□□□ 0.25
SLX4-202ENST00000466154 MT-CO1P00395 513 aa16.61■□□□□ 0.25
SLX4-202ENST00000466154 AKR1A1P14550 325 aa16.61■□□□□ 0.25
SLX4-202ENST00000466154 ETFBP38117 255 aa16.61■□□□□ 0.25
SLX4-202ENST00000466154 SLC5A3P53794 718 aa16.61■□□□□ 0.25
SLX4-202ENST00000466154 SLC12A2P55011 1212 aa16.61■□□□□ 0.25
SLX4-202ENST00000466154 ASPHQ12797 758 aa16.61■□□□□ 0.25
SLX4-202ENST00000466154 NAB1Q13506 487 aa16.61■□□□□ 0.25
SLX4-202ENST00000466154 RABGAP1LQ5R372 815 aa16.61■□□□□ 0.25
SLX4-202ENST00000466154 NET1Q7Z628 596 aaPredicted RBP16.61■□□□□ 0.25
SLX4-202ENST00000466154 SDCCAG8Q86SQ7 713 aaPredicted RBP16.61■□□□□ 0.25
SLX4-202ENST00000466154 ZNF419Q96HQ0 510 aaPredicted RBP16.61■□□□□ 0.25
SLX4-202ENST00000466154 KLHL5Q96PQ7 755 aa16.61■□□□□ 0.25
SLX4-202ENST00000466154 ILKAPQ9H0C8 392 aaPredicted RBP16.61■□□□□ 0.25
SLX4-202ENST00000466154 TCF7L2Q9NQB0 619 aa16.61■□□□□ 0.25
SLX4-202ENST00000466154 NEMP2A6NFY4 417 aa16.6■□□□□ 0.25
SLX4-202ENST00000466154 TXNDC9O14530 226 aa16.6■□□□□ 0.25
SLX4-202ENST00000466154 AOC1P19801 751 aa16.6■□□□□ 0.25
SLX4-202ENST00000466154 TCN1P20061 433 aaPredicted RBP16.6■□□□□ 0.25
SLX4-202ENST00000466154 TBL3Q12788 808 aaKnown RBP16.6■□□□□ 0.25
SLX4-202ENST00000466154 TRIM32Q13049 653 aa16.6■□□□□ 0.25
SLX4-202ENST00000466154 DDR2Q16832 855 aa16.6■□□□□ 0.25
SLX4-202ENST00000466154 SLC39A12Q504Y0 691 aa16.6■□□□□ 0.25
SLX4-202ENST00000466154 ARL13AQ5H913 290 aaPredicted RBP16.6■□□□□ 0.25
SLX4-202ENST00000466154 LPCAT4Q643R3 524 aa16.6■□□□□ 0.25
SLX4-202ENST00000466154 KCTD11Q693B1 232 aa16.6■□□□□ 0.25
SLX4-202ENST00000466154 LDB1Q86U70 411 aaPredicted RBP16.6■□□□□ 0.25
SLX4-202ENST00000466154 NXNL1Q96CM4 212 aa16.6■□□□□ 0.25
SLX4-202ENST00000466154 CMTM5Q96DZ9 223 aa16.6■□□□□ 0.25
SLX4-202ENST00000466154 LENG8Q96PV6 779 aaPredicted RBP16.6■□□□□ 0.25
SLX4-202ENST00000466154 GTSE1Q9NYZ3 720 aa16.6■□□□□ 0.25
SLX4-202ENST00000466154 XPR1Q9UBH6 696 aa16.6■□□□□ 0.25
SLX4-202ENST00000466154 RPL26L1Q9UNX3 145 aaKnown RBP16.6■□□□□ 0.25
SLX4-202ENST00000466154 AURKAO14965 403 aa16.6■□□□□ 0.25
SLX4-202ENST00000466154 MTSS1O43312 755 aa16.6■□□□□ 0.25
SLX4-202ENST00000466154 BUD23O43709 281 aaKnown RBP16.6■□□□□ 0.25
SLX4-202ENST00000466154 NPY2RP49146 381 aa16.6■□□□□ 0.25
SLX4-202ENST00000466154 GPR15P49685 360 aa16.6■□□□□ 0.25
SLX4-202ENST00000466154 RAP1GDS1P52306 607 aa16.6■□□□□ 0.25
SLX4-202ENST00000466154 TSPY1Q01534 308 aa16.6■□□□□ 0.25
SLX4-202ENST00000466154 INSCQ1MX18 579 aa16.6■□□□□ 0.25
SLX4-202ENST00000466154 ANO4Q32M45 955 aa16.6■□□□□ 0.25
SLX4-202ENST00000466154 INTS6LQ5JSJ4 861 aaKnown RBP16.6■□□□□ 0.25
SLX4-202ENST00000466154 BHLHA9Q7RTU4 235 aa16.6■□□□□ 0.25
SLX4-202ENST00000466154 BNIPLQ7Z465 357 aa16.6■□□□□ 0.25
SLX4-202ENST00000466154 MIB1Q86YT6 1006 aa16.6■□□□□ 0.25
SLX4-202ENST00000466154 USP13Q92995 863 aaPredicted RBP16.6■□□□□ 0.25
SLX4-202ENST00000466154 EXT2Q93063 718 aa16.6■□□□□ 0.25
SLX4-202ENST00000466154 TRPV6Q9H1D0 765 aa16.6■□□□□ 0.25
SLX4-202ENST00000466154 SSX2IPQ9Y2D8 614 aa16.6■□□□□ 0.25
SLX4-202ENST00000466154 PCDHB12Q9Y5F1 795 aa16.6■□□□□ 0.25
SLX4-202ENST00000466154 PTCH2Q9Y6C5 1203 aa16.6■□□□□ 0.25
SLX4-202ENST00000466154 SF3B1O75533 1304 aaKnown RBP eCLIP16.6■□□□□ 0.25
SLX4-202ENST00000466154 MPOP05164 745 aa16.6■□□□□ 0.25
SLX4-202ENST00000466154 ACADSP16219 412 aa16.6■□□□□ 0.25
SLX4-202ENST00000466154 CPOXP36551 454 aa16.6■□□□□ 0.25
SLX4-202ENST00000466154 ACTR3P61158 418 aa16.6■□□□□ 0.25
SLX4-202ENST00000466154 DCLRE1AQ6PJP8 1040 aa16.6■□□□□ 0.25
SLX4-202ENST00000466154 FSTL5Q8N475 847 aaPredicted RBP16.6■□□□□ 0.25
SLX4-202ENST00000466154 TTC16Q8NEE8 873 aa16.6■□□□□ 0.25
SLX4-202ENST00000466154 ARHGAP39Q9C0H5 1083 aa16.6■□□□□ 0.25
SLX4-202ENST00000466154 SOAT2O75908 522 aa16.59■□□□□ 0.25
SLX4-202ENST00000466154 HNRNPLP14866 589 aaKnown RBP eCLIP16.59■□□□□ 0.25
SLX4-202ENST00000466154 SCAPQ12770 1279 aa16.59■□□□□ 0.25
SLX4-202ENST00000466154 CSHL1Q14406 222 aa16.59■□□□□ 0.25
SLX4-202ENST00000466154 TBCCQ15814 346 aa16.59■□□□□ 0.25
SLX4-202ENST00000466154 RAB41Q5JT25 222 aa16.59■□□□□ 0.25
SLX4-202ENST00000466154 TMC7Q7Z402 723 aa16.59■□□□□ 0.25
SLX4-202ENST00000466154 C14orf80Q86SX3 495 aa16.59■□□□□ 0.25
SLX4-202ENST00000466154 ZC3HC1Q86WB0 502 aaKnown RBP16.59■□□□□ 0.25
SLX4-202ENST00000466154 SNX32Q86XE0 403 aa16.59■□□□□ 0.25
SLX4-202ENST00000466154 CEP97Q8IW35 865 aa16.59■□□□□ 0.25
SLX4-202ENST00000466154 SNX31Q8N9S9 440 aa16.59■□□□□ 0.25
SLX4-202ENST00000466154 TRPV1Q8NER1 839 aa16.59■□□□□ 0.25
SLX4-202ENST00000466154 ZNF184Q99676 751 aaPredicted RBP16.59■□□□□ 0.25
SLX4-202ENST00000466154 MTG1Q9BT17 334 aaPredicted RBP16.59■□□□□ 0.25
SLX4-202ENST00000466154 NT5MQ9NPB1 228 aa16.59■□□□□ 0.25
SLX4-202ENST00000466154 C9IYK1 514 aa16.59■□□□□ 0.25
SLX4-202ENST00000466154 JUNP05412 331 aaKnown RBP16.59■□□□□ 0.25
SLX4-202ENST00000466154 HLA-DQB2P05538 268 aa16.59■□□□□ 0.25
SLX4-202ENST00000466154 COX4I1P13073 169 aa16.59■□□□□ 0.25
SLX4-202ENST00000466154 ENO3P13929 434 aaPredicted RBP16.59■□□□□ 0.25
SLX4-202ENST00000466154 ARSAP15289 507 aa16.59■□□□□ 0.25
SLX4-202ENST00000466154 GABRB3P28472 473 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms