RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 PIK3R2O00459 728 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 CST8O60676 142 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 GRAP2O75791 330 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 NFATC1O95644 943 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 FAM153BP0C7A2 387 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 USP17L7P0C7H9 530 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 CSH1P0DML2 217 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 CSH2P0DML3 217 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 KRT10P13645 584 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 GABRG2P18507 467 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 TGM2P21980 687 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 OAS2P29728 719 aaKnown RBP14.2□□□□□ -0.14
HDAC6-215ENST00000465457 HOXD12P35452 270 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 RPL21P46778 160 aaKnown RBP14.2□□□□□ -0.14
HDAC6-215ENST00000465457 KCNJ1P48048 391 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 ARSEP51690 589 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 TKTL1P51854 596 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 ZNF135P52742 658 aaPredicted RBP14.2□□□□□ -0.14
HDAC6-215ENST00000465457 EIF3BP55884 814 aaKnown RBP14.2□□□□□ -0.14
HDAC6-215ENST00000465457 MAP3K7CLP57077 242 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 MRPS21P82921 87 aaKnown RBP14.2□□□□□ -0.14
HDAC6-215ENST00000465457 ATP11AP98196 1134 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 GABPB1Q06547 395 aaPredicted RBP14.2□□□□□ -0.14
HDAC6-215ENST00000465457 ZNF33AQ06730 810 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 SNX1Q13596 522 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 DPYSL2Q16555 572 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 NFE2Q16621 373 aaPredicted RBP14.2□□□□□ -0.14
HDAC6-215ENST00000465457 CDO1Q16878 200 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 C15orf59Q2T9L4 293 aaPredicted RBP14.2□□□□□ -0.14
HDAC6-215ENST00000465457 FAM153CQ494X1 144 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 ERMARDQ5T6L9 678 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 DDX42Q86XP3 938 aaKnown RBP eCLIP14.2□□□□□ -0.14
HDAC6-215ENST00000465457 RFX6Q8HWS3 928 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 SLC35B2Q8TB61 432 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 ATG4AQ8WYN0 398 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 HSPH1Q92598 858 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 NT5C3BQ969T7 300 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 FAM149B1Q96BN6 582 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 FUBP3Q96I24 572 aaKnown RBP eCLIP14.2□□□□□ -0.14
HDAC6-215ENST00000465457 GDAP1L1Q96MZ0 367 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 PEBP4Q96S96 227 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 CALN1Q9BXU9 219 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 PCDH9Q9HC56 1237 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 CALCOCO1Q9P1Z2 691 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 FAM153AQ9UHL3 310 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 ZNF148Q9UQR1 794 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 CABIN1Q9Y6J0 2220 aa14.2□□□□□ -0.14
HDAC6-215ENST00000465457 TP53BP1Q12888 1972 aaPredicted RBP14.2□□□□□ -0.14
HDAC6-215ENST00000465457 CFAP69A5D8W1 941 aa14.19□□□□□ -0.14
HDAC6-215ENST00000465457 GOLGA6L10A6NI86 522 aa14.19□□□□□ -0.14
HDAC6-215ENST00000465457 CLDN5O00501 218 aa14.19□□□□□ -0.14
HDAC6-215ENST00000465457 MCF2LO15068 1137 aa14.19□□□□□ -0.14
HDAC6-215ENST00000465457 CBFA2T3O75081 653 aa14.19□□□□□ -0.14
HDAC6-215ENST00000465457 KAT7O95251 611 aa14.19□□□□□ -0.14
HDAC6-215ENST00000465457 ZBED1O96006 694 aa14.19□□□□□ -0.14
HDAC6-215ENST00000465457 F9P00740 461 aa14.19□□□□□ -0.14
HDAC6-215ENST00000465457 PLTPP55058 493 aa14.19□□□□□ -0.14
HDAC6-215ENST00000465457 HDAC4P56524 1084 aa14.19□□□□□ -0.14
HDAC6-215ENST00000465457 DAOAP59103 153 aa14.19□□□□□ -0.14
HDAC6-215ENST00000465457 SMARCB1Q12824 385 aa14.19□□□□□ -0.14
HDAC6-215ENST00000465457 DPYSL3Q14195 570 aa14.19□□□□□ -0.14
HDAC6-215ENST00000465457 TAF5Q15542 800 aa14.19□□□□□ -0.14
HDAC6-215ENST00000465457 OASLQ15646 514 aaKnown RBP14.19□□□□□ -0.14
HDAC6-215ENST00000465457 KCNT1Q5JUK3 1230 aa14.19□□□□□ -0.14
HDAC6-215ENST00000465457 SCYL2Q6P3W7 929 aa14.19□□□□□ -0.14
HDAC6-215ENST00000465457 ZDHHC24Q6UX98 284 aa14.19□□□□□ -0.14
HDAC6-215ENST00000465457 CYP4V2Q6ZWL3 525 aaPredicted RBP14.19□□□□□ -0.14
HDAC6-215ENST00000465457 IQCKQ8N0W5 287 aa14.19□□□□□ -0.14
HDAC6-215ENST00000465457 PHTF2Q8N3S3 785 aa14.19□□□□□ -0.14
HDAC6-215ENST00000465457 FBXO25Q8TCJ0 367 aa14.19□□□□□ -0.14
HDAC6-215ENST00000465457 FAF2Q96CS3 445 aa14.19□□□□□ -0.14
HDAC6-215ENST00000465457 TRMT2BQ96GJ1 504 aaKnown RBP14.19□□□□□ -0.14
HDAC6-215ENST00000465457 MYRFLQ96LU7 910 aa14.19□□□□□ -0.14
HDAC6-215ENST00000465457 HSPA12BQ96MM6 686 aa14.19□□□□□ -0.14
HDAC6-215ENST00000465457 SMOQ99835 787 aa14.19□□□□□ -0.14
HDAC6-215ENST00000465457 POLMQ9NP87 494 aaPredicted RBP14.19□□□□□ -0.14
HDAC6-215ENST00000465457 TOR4AQ9NXH8 423 aa14.19□□□□□ -0.14
HDAC6-215ENST00000465457 HCN2Q9UL51 889 aa14.19□□□□□ -0.14
HDAC6-215ENST00000465457 ARHGAP26Q9UNA1 814 aa14.19□□□□□ -0.14
HDAC6-215ENST00000465457 NEU2Q9Y3R4 380 aa14.19□□□□□ -0.14
HDAC6-215ENST00000465457 IGHV1OR15-9A0A0B4J2B8 117 aa14.18□□□□□ -0.14
HDAC6-215ENST00000465457 LEFTY2O00292 366 aa14.18□□□□□ -0.14
HDAC6-215ENST00000465457 APOL1O14791 398 aa14.18□□□□□ -0.14
HDAC6-215ENST00000465457 CAPN9O14815 690 aa14.18□□□□□ -0.14
HDAC6-215ENST00000465457 KRT14P02533 472 aa14.18□□□□□ -0.14
HDAC6-215ENST00000465457 PLA2G2AP14555 144 aa14.18□□□□□ -0.14
HDAC6-215ENST00000465457 ADCY8P40145 1251 aa14.18□□□□□ -0.14
HDAC6-215ENST00000465457 SULT1E1P49888 294 aa14.18□□□□□ -0.14
HDAC6-215ENST00000465457 DHX9Q08211 1270 aaKnown RBP14.18□□□□□ -0.14
HDAC6-215ENST00000465457 CYP4F3Q08477 520 aa14.18□□□□□ -0.14
HDAC6-215ENST00000465457 NR1H3Q13133 447 aa14.18□□□□□ -0.14
HDAC6-215ENST00000465457 DHCR24Q15392 516 aa14.18□□□□□ -0.14
HDAC6-215ENST00000465457 TRADDQ15628 312 aa14.18□□□□□ -0.14
HDAC6-215ENST00000465457 TRMT10CQ7L0Y3 403 aaKnown RBP14.18□□□□□ -0.14
HDAC6-215ENST00000465457 BNIPLQ7Z465 357 aa14.18□□□□□ -0.14
HDAC6-215ENST00000465457 ANKS1BQ7Z6G8 1248 aa14.18□□□□□ -0.14
HDAC6-215ENST00000465457 PCGF5Q86SE9 256 aa14.18□□□□□ -0.14
HDAC6-215ENST00000465457 MIB1Q86YT6 1006 aa14.18□□□□□ -0.14
HDAC6-215ENST00000465457 SPATA2LQ8IUW3 424 aaPredicted RBP14.18□□□□□ -0.14
HDAC6-215ENST00000465457 DEFB106AQ8N104 65 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms