RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 ARSIQ5FYB1 569 aa23.28■■□□□ 1.32
USP42-205ENST00000465073 MIIPQ5JXC2 388 aa23.28■■□□□ 1.32
USP42-205ENST00000465073 RETSATQ6NUM9 610 aa23.28■■□□□ 1.32
USP42-205ENST00000465073 C22orf39Q6P5X5 142 aa23.28■■□□□ 1.32
USP42-205ENST00000465073 MSANTD4Q8NCY6 345 aa23.28■■□□□ 1.32
USP42-205ENST00000465073 PPP1R16AQ96I34 528 aa23.28■■□□□ 1.32
USP42-205ENST00000465073 MYOCQ99972 504 aa23.28■■□□□ 1.32
USP42-205ENST00000465073 ASXL3Q9C0F0 2248 aa23.28■■□□□ 1.32
USP42-205ENST00000465073 LSM8O95777 96 aaKnown RBP23.27■■□□□ 1.32
USP42-205ENST00000465073 DGKAP23743 735 aa23.27■■□□□ 1.32
USP42-205ENST00000465073 KLHDC7AQ5VTJ3 777 aa23.27■■□□□ 1.32
USP42-205ENST00000465073 OR4C6Q8NH72 309 aa23.27■■□□□ 1.32
USP42-205ENST00000465073 FAM174AQ8TBP5 190 aa23.27■■□□□ 1.32
USP42-205ENST00000465073 SPON2Q9BUD6 331 aa23.27■■□□□ 1.32
USP42-205ENST00000465073 TNKS2Q9H2K2 1166 aa23.27■■□□□ 1.32
USP42-205ENST00000465073 TMPRSS4Q9NRS4 437 aa23.27■■□□□ 1.32
USP42-205ENST00000465073 LOC400499M0QZD8 3231 aa23.27■■□□□ 1.32
USP42-205ENST00000465073 SRGAP2O75044 1071 aa23.26■■□□□ 1.31
USP42-205ENST00000465073 PCDH8O95206 1070 aa23.26■■□□□ 1.31
USP42-205ENST00000465073 ERCC5P28715 1186 aaPredicted RBP23.26■■□□□ 1.31
USP42-205ENST00000465073 FLT3P36888 993 aa23.26■■□□□ 1.31
USP42-205ENST00000465073 ARTNQ5T4W7 220 aa23.26■■□□□ 1.31
USP42-205ENST00000465073 DPY19L3Q6ZPD9 716 aa23.26■■□□□ 1.31
USP42-205ENST00000465073 ARCQ7LC44 396 aa23.26■■□□□ 1.31
USP42-205ENST00000465073 OR7D4Q8NG98 312 aa23.26■■□□□ 1.31
USP42-205ENST00000465073 GRIN3AQ8TCU5 1115 aa23.26■■□□□ 1.31
USP42-205ENST00000465073 CEP44Q9C0F1 390 aa23.26■■□□□ 1.31
USP42-205ENST00000465073 CLCA2Q9UQC9 943 aa23.26■■□□□ 1.31
USP42-205ENST00000465073 FHOD1Q9Y613 1164 aa23.26■■□□□ 1.31
USP42-205ENST00000465073 LEFTY1O75610 366 aa23.25■■□□□ 1.31
USP42-205ENST00000465073 GLDCP23378 1020 aa23.25■■□□□ 1.31
USP42-205ENST00000465073 EIF2S3P41091 472 aaKnown RBP23.25■■□□□ 1.31
USP42-205ENST00000465073 INSM1Q01101 510 aaPredicted RBP23.25■■□□□ 1.31
USP42-205ENST00000465073 TMEM259Q4ZIN3 620 aa23.25■■□□□ 1.31
USP42-205ENST00000465073 TAF3Q5VWG9 929 aa23.25■■□□□ 1.31
USP42-205ENST00000465073 BNIPLQ7Z465 357 aa23.25■■□□□ 1.31
USP42-205ENST00000465073 ABI3BPQ7Z7G0 1075 aa23.25■■□□□ 1.31
USP42-205ENST00000465073 DCP2Q8IU60 420 aaKnown RBP23.25■■□□□ 1.31
USP42-205ENST00000465073 DCBLD1Q8N8Z6 715 aa23.25■■□□□ 1.31
USP42-205ENST00000465073 OR13H1Q8NG92 308 aa23.25■■□□□ 1.31
USP42-205ENST00000465073 IFT43Q96FT9 208 aa23.25■■□□□ 1.31
USP42-205ENST00000465073 NAA15Q9BXJ9 866 aaKnown RBP23.25■■□□□ 1.31
USP42-205ENST00000465073 CALN1Q9BXU9 219 aa23.25■■□□□ 1.31
USP42-205ENST00000465073 ZYG11BQ9C0D3 744 aa23.25■■□□□ 1.31
USP42-205ENST00000465073 FZD3Q9NPG1 666 aa23.25■■□□□ 1.31
USP42-205ENST00000465073 ZNF212Q9UDV6 495 aa23.25■■□□□ 1.31
USP42-205ENST00000465073 TMEM59LQ9UK28 342 aa23.25■■□□□ 1.31
USP42-205ENST00000465073 ZFR2Q9UPR6 939 aaKnown RBP23.25■■□□□ 1.31
USP42-205ENST00000465073 DOCK9Q9BZ29 2069 aa23.25■■□□□ 1.31
USP42-205ENST00000465073 RNF103O00237 685 aa23.24■■□□□ 1.31
USP42-205ENST00000465073 RRP8O43159 456 aaKnown RBP23.24■■□□□ 1.31
USP42-205ENST00000465073 ZNF821O75541 412 aaPredicted RBP23.24■■□□□ 1.31
USP42-205ENST00000465073 ZMPSTE24O75844 475 aa23.24■■□□□ 1.31
USP42-205ENST00000465073 ENDOD1O94919 500 aa23.24■■□□□ 1.31
USP42-205ENST00000465073 SERPINH1P50454 418 aaKnown RBP23.24■■□□□ 1.31
USP42-205ENST00000465073 NEK3P51956 506 aa23.24■■□□□ 1.31
USP42-205ENST00000465073 DAB2P98082 770 aa23.24■■□□□ 1.31
USP42-205ENST00000465073 LRRC69Q6ZNQ3 347 aa23.24■■□□□ 1.31
USP42-205ENST00000465073 PCDH20Q8N6Y1 951 aaKnown RBP23.24■■□□□ 1.31
USP42-205ENST00000465073 CRELD1Q96HD1 420 aa23.24■■□□□ 1.31
USP42-205ENST00000465073 CFAP57Q96MR6 1250 aa23.24■■□□□ 1.31
USP42-205ENST00000465073 BBC3Q96PG8 261 aaPredicted RBP23.24■■□□□ 1.31
USP42-205ENST00000465073 ATP13A1Q9HD20 1204 aa23.24■■□□□ 1.31
USP42-205ENST00000465073 UCKL1Q9NWZ5 548 aa23.24■■□□□ 1.31
USP42-205ENST00000465073 PPARGC1AQ9UBK2 798 aaKnown RBP23.24■■□□□ 1.31
USP42-205ENST00000465073 DACH1Q9UI36 760 aa23.24■■□□□ 1.31
USP42-205ENST00000465073 WASF2Q9Y6W5 498 aa23.24■■□□□ 1.31
USP42-205ENST00000465073 GOLGA8SH3BPF8 625 aa23.24■■□□□ 1.31
USP42-205ENST00000465073 PES1O00541 588 aaKnown RBP23.24■■□□□ 1.31
USP42-205ENST00000465073 TLX3O43711 291 aaPredicted RBP23.24■■□□□ 1.31
USP42-205ENST00000465073 UCHL3P15374 230 aa23.24■■□□□ 1.31
USP42-205ENST00000465073 CLDN2P57739 230 aa23.24■■□□□ 1.31
USP42-205ENST00000465073 RPS21P63220 83 aaKnown RBP23.24■■□□□ 1.31
USP42-205ENST00000465073 GNA12Q03113 381 aa23.24■■□□□ 1.31
USP42-205ENST00000465073 SEL1L3Q68CR1 1132 aa23.24■■□□□ 1.31
USP42-205ENST00000465073 TRNP1Q6NT89 227 aa23.24■■□□□ 1.31
USP42-205ENST00000465073 GCNT7Q6ZNI0 430 aa23.24■■□□□ 1.31
USP42-205ENST00000465073 NOP9Q86U38 636 aaKnown RBP23.24■■□□□ 1.31
USP42-205ENST00000465073 BAP1Q92560 729 aa23.24■■□□□ 1.31
USP42-205ENST00000465073 FEM1CQ96JP0 617 aa23.24■■□□□ 1.31
USP42-205ENST00000465073 HEPHQ9BQS7 1158 aa23.24■■□□□ 1.31
USP42-205ENST00000465073 CLSTN2Q9H4D0 955 aa23.24■■□□□ 1.31
USP42-205ENST00000465073 HS3ST3A1Q9Y663 406 aa23.24■■□□□ 1.31
USP42-205ENST00000465073 EIF4E1BA6NMX2 242 aaKnown RBP23.23■■□□□ 1.31
USP42-205ENST00000465073 A6NNZ2 444 aa23.23■■□□□ 1.31
USP42-205ENST00000465073 PIAS2O75928 621 aa23.23■■□□□ 1.31
USP42-205ENST00000465073 ALPPL2P10696 532 aa23.23■■□□□ 1.31
USP42-205ENST00000465073 ITGB7P26010 798 aa23.23■■□□□ 1.31
USP42-205ENST00000465073 L1CAMP32004 1257 aa23.23■■□□□ 1.31
USP42-205ENST00000465073 DNA2P51530 1060 aa23.23■■□□□ 1.31
USP42-205ENST00000465073 DPCR1Q3MIW9 517 aa23.23■■□□□ 1.31
USP42-205ENST00000465073 C2CD6Q53TS8 623 aa23.23■■□□□ 1.31
USP42-205ENST00000465073 HSP90AA4PQ58FG1 418 aa23.23■■□□□ 1.31
USP42-205ENST00000465073 CARD16Q5EG05 197 aa23.23■■□□□ 1.31
USP42-205ENST00000465073 KIAA1161Q6NSJ0 714 aa23.23■■□□□ 1.31
USP42-205ENST00000465073 Q6ZSR6 202 aa23.23■■□□□ 1.31
USP42-205ENST00000465073 FAM131BQ86XD5 332 aa23.23■■□□□ 1.31
USP42-205ENST00000465073 SNIP1Q8TAD8 396 aaKnown RBP23.23■■□□□ 1.31
USP42-205ENST00000465073 CPA5Q8WXQ8 436 aa23.23■■□□□ 1.31
USP42-205ENST00000465073 STK33Q9BYT3 514 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms