RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 RAB44Q7Z6P3 723 aaPredicted RBP26.42■■□□□ 1.82
U2AF1-206ENST00000464750 NLRP14Q86W24 1093 aa26.42■■□□□ 1.82
U2AF1-206ENST00000464750 TRIM69Q86WT6 500 aa26.42■■□□□ 1.82
U2AF1-206ENST00000464750 CHCHD4Q8N4Q1 142 aa26.42■■□□□ 1.82
U2AF1-206ENST00000464750 TMIEQ8NEW7 156 aa26.42■■□□□ 1.82
U2AF1-206ENST00000464750 GRIN3AQ8TCU5 1115 aa26.42■■□□□ 1.82
U2AF1-206ENST00000464750 RHBDD1Q8TEB9 315 aa26.42■■□□□ 1.82
U2AF1-206ENST00000464750 BAP1Q92560 729 aa26.42■■□□□ 1.82
U2AF1-206ENST00000464750 ARRDC3Q96B67 414 aa26.42■■□□□ 1.82
U2AF1-206ENST00000464750 MCEEQ96PE7 176 aa26.42■■□□□ 1.82
U2AF1-206ENST00000464750 TMEM121BQ9BXQ6 578 aaPredicted RBP26.42■■□□□ 1.82
U2AF1-206ENST00000464750 CEP44Q9C0F1 390 aa26.42■■□□□ 1.82
U2AF1-206ENST00000464750 NDFIP2Q9NV92 336 aa26.42■■□□□ 1.82
U2AF1-206ENST00000464750 TMEM248Q9NWD8 314 aa26.42■■□□□ 1.82
U2AF1-206ENST00000464750 MYO6Q9UM54 1294 aa26.42■■□□□ 1.82
U2AF1-206ENST00000464750 IGF2RP11717 2491 aa26.42■■□□□ 1.82
U2AF1-206ENST00000464750 ANKRD62A6NC57 917 aa26.41■■□□□ 1.82
U2AF1-206ENST00000464750 PCDHGA12O60330 932 aa26.41■■□□□ 1.82
U2AF1-206ENST00000464750 DFNA5O60443 496 aa26.41■■□□□ 1.82
U2AF1-206ENST00000464750 PROS1P07225 676 aa26.41■■□□□ 1.82
U2AF1-206ENST00000464750 PLEKP08567 350 aaPredicted RBP26.41■■□□□ 1.82
U2AF1-206ENST00000464750 ACVRL1P37023 503 aa26.41■■□□□ 1.82
U2AF1-206ENST00000464750 ETFBP38117 255 aa26.41■■□□□ 1.82
U2AF1-206ENST00000464750 TAS2R38P59533 333 aa26.41■■□□□ 1.82
U2AF1-206ENST00000464750 FILIP1LQ4L180 1135 aa26.41■■□□□ 1.82
U2AF1-206ENST00000464750 SLC45A4Q5BKX6 768 aa26.41■■□□□ 1.82
U2AF1-206ENST00000464750 ACAD10Q6JQN1 1059 aa26.41■■□□□ 1.82
U2AF1-206ENST00000464750 DPY19L3Q6ZPD9 716 aa26.41■■□□□ 1.82
U2AF1-206ENST00000464750 IRF2BP2Q7Z5L9 587 aa26.41■■□□□ 1.82
U2AF1-206ENST00000464750 PNPLA1Q8N8W4 532 aa26.41■■□□□ 1.82
U2AF1-206ENST00000464750 ELF4Q99607 663 aaPredicted RBP26.41■■□□□ 1.82
U2AF1-206ENST00000464750 PREBQ9HCU5 417 aa26.41■■□□□ 1.82
U2AF1-206ENST00000464750 DYRK4Q9NR20 520 aa26.41■■□□□ 1.82
U2AF1-206ENST00000464750 ARHGAP20Q9P2F6 1191 aa26.41■■□□□ 1.82
U2AF1-206ENST00000464750 IL36AQ9UHA7 158 aa26.41■■□□□ 1.82
U2AF1-206ENST00000464750 DNAI1Q9UI46 699 aa26.41■■□□□ 1.82
U2AF1-206ENST00000464750 APOBEC2Q9Y235 224 aaKnown RBP26.41■■□□□ 1.82
U2AF1-206ENST00000464750 AKAP13Q12802 2813 aa26.4■■□□□ 1.82
U2AF1-206ENST00000464750 A0A1B0GTQ1 180 aa26.4■■□□□ 1.82
U2AF1-206ENST00000464750 RNF103O00237 685 aa26.4■■□□□ 1.82
U2AF1-206ENST00000464750 ZNF821O75541 412 aaPredicted RBP26.4■■□□□ 1.82
U2AF1-206ENST00000464750 NUDT1P36639 197 aa26.4■■□□□ 1.82
U2AF1-206ENST00000464750 ZNF165P49910 485 aa26.4■■□□□ 1.82
U2AF1-206ENST00000464750 ZNF143P52747 638 aaPredicted RBP26.4■■□□□ 1.82
U2AF1-206ENST00000464750 SLC20A2Q08357 652 aa26.4■■□□□ 1.82
U2AF1-206ENST00000464750 SCAPQ12770 1279 aa26.4■■□□□ 1.82
U2AF1-206ENST00000464750 SLFN11Q7Z7L1 901 aa26.4■■□□□ 1.82
U2AF1-206ENST00000464750 MCOLN2Q8IZK6 566 aa26.4■■□□□ 1.82
U2AF1-206ENST00000464750 PCDH20Q8N6Y1 951 aaKnown RBP26.4■■□□□ 1.82
U2AF1-206ENST00000464750 GATA6Q92908 595 aa26.4■■□□□ 1.82
U2AF1-206ENST00000464750 CDC6Q99741 560 aa26.4■■□□□ 1.82
U2AF1-206ENST00000464750 SYT11Q9BT88 431 aa26.4■■□□□ 1.82
U2AF1-206ENST00000464750 RETREG1Q9H6L5 497 aa26.4■■□□□ 1.82
U2AF1-206ENST00000464750 DMTF1Q9Y222 760 aa26.4■■□□□ 1.82
U2AF1-206ENST00000464750 FCF1Q9Y324 198 aaKnown RBP26.4■■□□□ 1.82
U2AF1-206ENST00000464750 ACTL7AQ9Y615 435 aa26.4■■□□□ 1.82
U2AF1-206ENST00000464750 SPEGQ15772 3267 aa26.39■■□□□ 1.82
U2AF1-206ENST00000464750 LRRC53A6NM62 1247 aa26.39■■□□□ 1.82
U2AF1-206ENST00000464750 TNFAIP3P21580 790 aa26.39■■□□□ 1.82
U2AF1-206ENST00000464750 GRK6P43250 576 aa26.39■■□□□ 1.82
U2AF1-206ENST00000464750 RPL7AP62424 266 aaKnown RBP26.39■■□□□ 1.82
U2AF1-206ENST00000464750 ARSIQ5FYB1 569 aa26.39■■□□□ 1.82
U2AF1-206ENST00000464750 EFHC2Q5JST6 749 aa26.39■■□□□ 1.82
U2AF1-206ENST00000464750 PPP1R15BQ5SWA1 713 aa26.39■■□□□ 1.82
U2AF1-206ENST00000464750 PRAMEF14Q5SWL7 426 aa26.39■■□□□ 1.82
U2AF1-206ENST00000464750 SCYL2Q6P3W7 929 aa26.39■■□□□ 1.82
U2AF1-206ENST00000464750 ADAMTS14Q8WXS8 1223 aa26.39■■□□□ 1.82
U2AF1-206ENST00000464750 ARHGEF2Q92974 986 aaKnown RBP26.39■■□□□ 1.82
U2AF1-206ENST00000464750 GDF3Q9NR23 364 aa26.39■■□□□ 1.82
U2AF1-206ENST00000464750 TAS2R14Q9NYV8 317 aa26.39■■□□□ 1.82
U2AF1-206ENST00000464750 MSRB2Q9Y3D2 182 aa26.39■■□□□ 1.82
U2AF1-206ENST00000464750 WASF2Q9Y6W5 498 aa26.39■■□□□ 1.82
U2AF1-206ENST00000464750 RNGTTO60942 597 aaKnown RBP26.38■■□□□ 1.81
U2AF1-206ENST00000464750 LEFTY1O75610 366 aa26.38■■□□□ 1.81
U2AF1-206ENST00000464750 DNA2P51530 1060 aa26.38■■□□□ 1.81
U2AF1-206ENST00000464750 NXPH1P58417 271 aa26.38■■□□□ 1.81
U2AF1-206ENST00000464750 CCDC15Q0P6D6 951 aa26.38■■□□□ 1.81
U2AF1-206ENST00000464750 ASIC2Q16515 512 aa26.38■■□□□ 1.81
U2AF1-206ENST00000464750 INAVAQ3KP66 663 aa26.38■■□□□ 1.81
U2AF1-206ENST00000464750 SETMARQ53H47 684 aaPredicted RBP26.38■■□□□ 1.81
U2AF1-206ENST00000464750 DCUN1D2Q6PH85 259 aa26.38■■□□□ 1.81
U2AF1-206ENST00000464750 PYROXD2Q8N2H3 581 aa26.38■■□□□ 1.81
U2AF1-206ENST00000464750 PPP1R16AQ96I34 528 aa26.38■■□□□ 1.81
U2AF1-206ENST00000464750 FUCA2Q9BTY2 467 aa26.38■■□□□ 1.81
U2AF1-206ENST00000464750 PTPRBP23467 1997 aa26.38■■□□□ 1.81
U2AF1-206ENST00000464750 TLR4O00206 839 aa26.37■■□□□ 1.81
U2AF1-206ENST00000464750 RAMP2O60895 175 aa26.37■■□□□ 1.81
U2AF1-206ENST00000464750 CD160O95971 181 aa26.37■■□□□ 1.81
U2AF1-206ENST00000464750 CCNHP51946 323 aaPredicted RBP26.37■■□□□ 1.81
U2AF1-206ENST00000464750 CARD16Q5EG05 197 aa26.37■■□□□ 1.81
U2AF1-206ENST00000464750 ERN2Q76MJ5 926 aaKnown RBP26.37■■□□□ 1.81
U2AF1-206ENST00000464750 SLCO6A1Q86UG4 719 aa26.37■■□□□ 1.81
U2AF1-206ENST00000464750 MFSD2AQ8NA29 543 aa26.37■■□□□ 1.81
U2AF1-206ENST00000464750 CNPY3Q9BT09 278 aa26.37■■□□□ 1.81
U2AF1-206ENST00000464750 TM6SF2Q9BZW4 377 aa26.37■■□□□ 1.81
U2AF1-206ENST00000464750 MAGEH1Q9H213 219 aa26.37■■□□□ 1.81
U2AF1-206ENST00000464750 A0A1B0GTH6 734 aa26.36■■□□□ 1.81
U2AF1-206ENST00000464750 CXorf51AA0A1B0GTR3 108 aa26.36■■□□□ 1.81
U2AF1-206ENST00000464750 A0A1W2PQC6 194 aa26.36■■□□□ 1.81
U2AF1-206ENST00000464750 A0A1W2PQU0 124 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms