RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 PCDHA10Q9Y5I2 948 aa4.48□□□□□ -1.69
ITGB1-208ENST00000464001 A0A1B0GUV1 79 aa4.47□□□□□ -1.69
ITGB1-208ENST00000464001 FAM90A18PA6NE21 464 aa4.47□□□□□ -1.69
ITGB1-208ENST00000464001 TMEM247A6NEH6 219 aa4.47□□□□□ -1.69
ITGB1-208ENST00000464001 FAM90A16PA6NEW6 464 aa4.47□□□□□ -1.69
ITGB1-208ENST00000464001 AGAP5A6NIR3 686 aa4.47□□□□□ -1.69
ITGB1-208ENST00000464001 FAM90A9PA6NNJ1 464 aa4.47□□□□□ -1.69
ITGB1-208ENST00000464001 FAM90A5PA8MXJ8 464 aa4.47□□□□□ -1.69
ITGB1-208ENST00000464001 TCERG1O14776 1098 aaKnown RBP4.47□□□□□ -1.69
ITGB1-208ENST00000464001 LDB3O75112 727 aa4.47□□□□□ -1.69
ITGB1-208ENST00000464001 TMCC1O94876 653 aa4.47□□□□□ -1.69
ITGB1-208ENST00000464001 FAM90A15PP0C7V4 464 aa4.47□□□□□ -1.69
ITGB1-208ENST00000464001 FAM90A14PP0C7W9 464 aa4.47□□□□□ -1.69
ITGB1-208ENST00000464001 ABCB4P21439 1286 aa4.47□□□□□ -1.69
ITGB1-208ENST00000464001 CDK7P50613 346 aa4.47□□□□□ -1.69
ITGB1-208ENST00000464001 TMPRSS3P57727 454 aa4.47□□□□□ -1.69
ITGB1-208ENST00000464001 KIF5AQ12840 1032 aa4.47□□□□□ -1.69
ITGB1-208ENST00000464001 BTBD16Q32M84 506 aa4.47□□□□□ -1.69
ITGB1-208ENST00000464001 GFI1BQ5VTD9 330 aa4.47□□□□□ -1.69
ITGB1-208ENST00000464001 TMEM71Q6P5X7 295 aa4.47□□□□□ -1.69
ITGB1-208ENST00000464001 MMS22LQ6ZRQ5 1243 aa4.47□□□□□ -1.69
ITGB1-208ENST00000464001 RINLQ6ZS11 566 aa4.47□□□□□ -1.69
ITGB1-208ENST00000464001 C16orf82Q7Z2V1 217 aa4.47□□□□□ -1.69
ITGB1-208ENST00000464001 CLIP4Q8N3C7 705 aa4.47□□□□□ -1.69
ITGB1-208ENST00000464001 HORMAD2Q8N7B1 307 aa4.47□□□□□ -1.69
ITGB1-208ENST00000464001 PPHLN1Q8NEY8 458 aaKnown RBP4.47□□□□□ -1.69
ITGB1-208ENST00000464001 RTP4Q96DX8 246 aa4.47□□□□□ -1.69
ITGB1-208ENST00000464001 MPP4Q96JB8 637 aa4.47□□□□□ -1.69
ITGB1-208ENST00000464001 APOLD1Q96LR9 279 aa4.47□□□□□ -1.69
ITGB1-208ENST00000464001 DOCK7Q96N67 2140 aa4.47□□□□□ -1.69
ITGB1-208ENST00000464001 PDE11AQ9HCR9 933 aa4.47□□□□□ -1.69
ITGB1-208ENST00000464001 PLEKHB1Q9UF11 243 aaPredicted RBP4.47□□□□□ -1.69
ITGB1-208ENST00000464001 PCDHGB3Q9Y5G1 929 aa4.47□□□□□ -1.69
ITGB1-208ENST00000464001 SMTNL1A8MU46 457 aa4.46□□□□□ -1.7
ITGB1-208ENST00000464001 ZNF432O94892 652 aa4.46□□□□□ -1.7
ITGB1-208ENST00000464001 UNGP13051 313 aaPredicted RBP4.46□□□□□ -1.7
ITGB1-208ENST00000464001 GNLYP22749 145 aa4.46□□□□□ -1.7
ITGB1-208ENST00000464001 RRM1P23921 792 aa4.46□□□□□ -1.7
ITGB1-208ENST00000464001 PRPH2P23942 346 aa4.46□□□□□ -1.7
ITGB1-208ENST00000464001 GSTM2P28161 218 aa4.46□□□□□ -1.7
ITGB1-208ENST00000464001 CASP2P42575 452 aa4.46□□□□□ -1.7
ITGB1-208ENST00000464001 TECP42680 631 aa4.46□□□□□ -1.7
ITGB1-208ENST00000464001 PPP3CCP48454 512 aa4.46□□□□□ -1.7
ITGB1-208ENST00000464001 PDLIM4P50479 330 aa4.46□□□□□ -1.7
ITGB1-208ENST00000464001 ERVFC1-1P60608 527 aa4.46□□□□□ -1.7
ITGB1-208ENST00000464001 POU3F1Q03052 451 aaPredicted RBP4.46□□□□□ -1.7
ITGB1-208ENST00000464001 STARD3Q14849 445 aa4.46□□□□□ -1.7
ITGB1-208ENST00000464001 PLCB4Q15147 1175 aa4.46□□□□□ -1.7
ITGB1-208ENST00000464001 HLFQ16534 295 aa4.46□□□□□ -1.7
ITGB1-208ENST00000464001 XRRA1Q6P2D8 792 aa4.46□□□□□ -1.7
ITGB1-208ENST00000464001 SRLQ86TD4 932 aa4.46□□□□□ -1.7
ITGB1-208ENST00000464001 PALB2Q86YC2 1186 aa4.46□□□□□ -1.7
ITGB1-208ENST00000464001 FAM71BQ8TC56 605 aa4.46□□□□□ -1.7
ITGB1-208ENST00000464001 SLC35F5Q8WV83 523 aa4.46□□□□□ -1.7
ITGB1-208ENST00000464001 SKA1Q96BD8 255 aa4.46□□□□□ -1.7
ITGB1-208ENST00000464001 TMEM41AQ96HV5 264 aa4.46□□□□□ -1.7
ITGB1-208ENST00000464001 SGCZQ96LD1 299 aa4.46□□□□□ -1.7
ITGB1-208ENST00000464001 ZNF556Q9HAH1 456 aa4.46□□□□□ -1.7
ITGB1-208ENST00000464001 SAGE1Q9NXZ1 904 aa4.46□□□□□ -1.7
ITGB1-208ENST00000464001 CLIC5Q9NZA1 410 aa4.46□□□□□ -1.7
ITGB1-208ENST00000464001 FNIP2Q9P278 1114 aa4.46□□□□□ -1.7
ITGB1-208ENST00000464001 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.45□□□□□ -1.7
ITGB1-208ENST00000464001 C17orf102A2RUQ5 167 aa4.45□□□□□ -1.7
ITGB1-208ENST00000464001 GOLGA6L3A6NEY3 463 aa4.45□□□□□ -1.7
ITGB1-208ENST00000464001 AQP12BA6NM10 295 aa4.45□□□□□ -1.7
ITGB1-208ENST00000464001 F5H423 210 aaPredicted RBP4.45□□□□□ -1.7
ITGB1-208ENST00000464001 ZBTB11O95625 1053 aaPredicted RBP4.45□□□□□ -1.7
ITGB1-208ENST00000464001 PPP1R3DO95685 299 aa4.45□□□□□ -1.7
ITGB1-208ENST00000464001 AGR2O95994 175 aa4.45□□□□□ -1.7
ITGB1-208ENST00000464001 ENO3P13929 434 aaPredicted RBP4.45□□□□□ -1.7
ITGB1-208ENST00000464001 TNFAIP3P21580 790 aa4.45□□□□□ -1.7
ITGB1-208ENST00000464001 PRKCHP24723 683 aa4.45□□□□□ -1.7
ITGB1-208ENST00000464001 AMTP48728 403 aa4.45□□□□□ -1.7
ITGB1-208ENST00000464001 NUDT6P53370 316 aa4.45□□□□□ -1.7
ITGB1-208ENST00000464001 TERF1P54274 439 aa4.45□□□□□ -1.7
ITGB1-208ENST00000464001 COASYQ13057 564 aa4.45□□□□□ -1.7
ITGB1-208ENST00000464001 ALKBH1Q13686 389 aaKnown RBP4.45□□□□□ -1.7
ITGB1-208ENST00000464001 SPARCL1Q14515 664 aa4.45□□□□□ -1.7
ITGB1-208ENST00000464001 TOMM20Q15388 145 aa4.45□□□□□ -1.7
ITGB1-208ENST00000464001 PUM3Q15397 648 aaKnown RBP4.45□□□□□ -1.7
ITGB1-208ENST00000464001 C9orf57Q5W0N0 161 aa4.45□□□□□ -1.7
ITGB1-208ENST00000464001 GSG1LQ6UXU4 331 aa4.45□□□□□ -1.7
ITGB1-208ENST00000464001 H1FNTQ75WM6 255 aaPredicted RBP4.45□□□□□ -1.7
ITGB1-208ENST00000464001 ARMC9Q7Z3E5 817 aa4.45□□□□□ -1.7
ITGB1-208ENST00000464001 FJX1Q86VR8 437 aa4.45□□□□□ -1.7
ITGB1-208ENST00000464001 CEP76Q8TAP6 659 aa4.45□□□□□ -1.7
ITGB1-208ENST00000464001 WFIKKN2Q8TEU8 576 aa4.45□□□□□ -1.7
ITGB1-208ENST00000464001 FAM216AQ8WUB2 273 aa4.45□□□□□ -1.7
ITGB1-208ENST00000464001 STYXQ8WUJ0 223 aa4.45□□□□□ -1.7
ITGB1-208ENST00000464001 ERP27Q96DN0 273 aa4.45□□□□□ -1.7
ITGB1-208ENST00000464001 DUX5Q96PT3 197 aa4.45□□□□□ -1.7
ITGB1-208ENST00000464001 GFM1Q96RP9 751 aaKnown RBP4.45□□□□□ -1.7
ITGB1-208ENST00000464001 C1QTNF4Q9BXJ3 329 aa4.45□□□□□ -1.7
ITGB1-208ENST00000464001 HDHD5Q9BXW7 423 aa4.45□□□□□ -1.7
ITGB1-208ENST00000464001 TRIM31Q9BZY9 425 aa4.45□□□□□ -1.7
ITGB1-208ENST00000464001 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.45□□□□□ -1.7
ITGB1-208ENST00000464001 BRD8Q9H0E9 1235 aa4.45□□□□□ -1.7
ITGB1-208ENST00000464001 Q9N2J8 555 aa4.45□□□□□ -1.7
ITGB1-208ENST00000464001 NLRC4Q9NPP4 1024 aa4.45□□□□□ -1.7
ITGB1-208ENST00000464001 TMEM248Q9NWD8 314 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms