RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 POM121BA6NF01 834 aa14.81□□□□□ -0.04
SMC1A-204ENST00000463684 TPP1O14773 563 aa14.81□□□□□ -0.04
SMC1A-204ENST00000463684 PAK4O96013 591 aaPredicted RBP14.81□□□□□ -0.04
SMC1A-204ENST00000463684 JUNDP17535 347 aa14.81□□□□□ -0.04
SMC1A-204ENST00000463684 PRCPP42785 496 aa14.81□□□□□ -0.04
SMC1A-204ENST00000463684 RECQLP46063 649 aaPredicted RBP14.81□□□□□ -0.04
SMC1A-204ENST00000463684 RABIFP47224 123 aa14.81□□□□□ -0.04
SMC1A-204ENST00000463684 RPS21P63220 83 aaKnown RBP14.81□□□□□ -0.04
SMC1A-204ENST00000463684 PITX1P78337 314 aaPredicted RBP14.81□□□□□ -0.04
SMC1A-204ENST00000463684 EIF4EBP2Q13542 120 aaPredicted RBP14.81□□□□□ -0.04
SMC1A-204ENST00000463684 DEFB133Q30KQ1 61 aa14.81□□□□□ -0.04
SMC1A-204ENST00000463684 TMEM259Q4ZIN3 620 aa14.81□□□□□ -0.04
SMC1A-204ENST00000463684 ARSIQ5FYB1 569 aa14.81□□□□□ -0.04
SMC1A-204ENST00000463684 C6orf132Q5T0Z8 1188 aa14.81□□□□□ -0.04
SMC1A-204ENST00000463684 ANKRD40Q6AI12 368 aa14.81□□□□□ -0.04
SMC1A-204ENST00000463684 CRTC1Q6UUV9 634 aa14.81□□□□□ -0.04
SMC1A-204ENST00000463684 KYAT3Q6YP21 454 aaKnown RBP14.81□□□□□ -0.04
SMC1A-204ENST00000463684 USP53Q70EK8 1073 aa14.81□□□□□ -0.04
SMC1A-204ENST00000463684 RRAGAQ7L523 313 aa14.81□□□□□ -0.04
SMC1A-204ENST00000463684 CLEC14AQ86T13 490 aa14.81□□□□□ -0.04
SMC1A-204ENST00000463684 EXD3Q8N9H8 876 aa14.81□□□□□ -0.04
SMC1A-204ENST00000463684 OR52K2Q8NGK3 314 aa14.81□□□□□ -0.04
SMC1A-204ENST00000463684 BTN2A2Q8WVV5 523 aa14.81□□□□□ -0.04
SMC1A-204ENST00000463684 KAT5Q92993 513 aa14.81□□□□□ -0.04
SMC1A-204ENST00000463684 C2orf49Q9BVC5 232 aaPredicted RBP14.81□□□□□ -0.04
SMC1A-204ENST00000463684 SLC4A5Q9BY07 1137 aa14.81□□□□□ -0.04
SMC1A-204ENST00000463684 TRIM4Q9C037 500 aa14.81□□□□□ -0.04
SMC1A-204ENST00000463684 METTL14Q9HCE5 456 aaKnown RBP14.81□□□□□ -0.04
SMC1A-204ENST00000463684 RMND1Q9NWS8 449 aa14.81□□□□□ -0.04
SMC1A-204ENST00000463684 IL36AQ9UHA7 158 aa14.81□□□□□ -0.04
SMC1A-204ENST00000463684 VANGL2Q9ULK5 521 aa14.81□□□□□ -0.04
SMC1A-204ENST00000463684 CCDC187A0A096LP49 1063 aa14.8□□□□□ -0.04
SMC1A-204ENST00000463684 FAM237AA0A1B0GTK4 181 aa14.8□□□□□ -0.04
SMC1A-204ENST00000463684 E5RJQ4 531 aa14.8□□□□□ -0.04
SMC1A-204ENST00000463684 FPGTO14772 594 aa14.8□□□□□ -0.04
SMC1A-204ENST00000463684 MUSKO15146 869 aa14.8□□□□□ -0.04
SMC1A-204ENST00000463684 MED7O43513 233 aa14.8□□□□□ -0.04
SMC1A-204ENST00000463684 MT-CO1P00395 513 aa14.8□□□□□ -0.04
SMC1A-204ENST00000463684 ITGA2BP08514 1039 aa14.8□□□□□ -0.04
SMC1A-204ENST00000463684 CDH4P55283 916 aa14.8□□□□□ -0.04
SMC1A-204ENST00000463684 SGCGQ13326 291 aa14.8□□□□□ -0.04
SMC1A-204ENST00000463684 SPIDRQ14159 915 aa14.8□□□□□ -0.04
SMC1A-204ENST00000463684 KIAA1161Q6NSJ0 714 aa14.8□□□□□ -0.04
SMC1A-204ENST00000463684 DENND1BQ6P3S1 775 aa14.8□□□□□ -0.04
SMC1A-204ENST00000463684 ATG14Q6ZNE5 492 aa14.8□□□□□ -0.04
SMC1A-204ENST00000463684 TMEM110Q86TL2 294 aa14.8□□□□□ -0.04
SMC1A-204ENST00000463684 GRIN3AQ8TCU5 1115 aa14.8□□□□□ -0.04
SMC1A-204ENST00000463684 NAT6Q93015 286 aa14.8□□□□□ -0.04
SMC1A-204ENST00000463684 GPR27Q9NS67 375 aa14.8□□□□□ -0.04
SMC1A-204ENST00000463684 SPASTQ9UBP0 616 aa14.8□□□□□ -0.04
SMC1A-204ENST00000463684 ATXN7L1Q9ULK2 861 aaPredicted RBP14.8□□□□□ -0.04
SMC1A-204ENST00000463684 TBC1D30Q9Y2I9 924 aa14.8□□□□□ -0.04
SMC1A-204ENST00000463684 HECTD1Q9ULT8 2610 aa14.8□□□□□ -0.04
SMC1A-204ENST00000463684 PMS2P1A4D2B8 440 aa14.79□□□□□ -0.04
SMC1A-204ENST00000463684 K7ERQ8 282 aa14.79□□□□□ -0.04
SMC1A-204ENST00000463684 PMM2O15305 246 aa14.79□□□□□ -0.04
SMC1A-204ENST00000463684 ZNF202O95125 648 aa14.79□□□□□ -0.04
SMC1A-204ENST00000463684 SFTPCP11686 197 aa14.79□□□□□ -0.04
SMC1A-204ENST00000463684 KRT5P13647 590 aa14.79□□□□□ -0.04
SMC1A-204ENST00000463684 CLCN6P51797 869 aa14.79□□□□□ -0.04
SMC1A-204ENST00000463684 NEK3P51956 506 aa14.79□□□□□ -0.04
SMC1A-204ENST00000463684 INHBCP55103 352 aa14.79□□□□□ -0.04
SMC1A-204ENST00000463684 GCNT1Q02742 428 aa14.79□□□□□ -0.04
SMC1A-204ENST00000463684 LRRC63Q05C16 580 aa14.79□□□□□ -0.04
SMC1A-204ENST00000463684 PDE1CQ14123 709 aaPredicted RBP14.79□□□□□ -0.04
SMC1A-204ENST00000463684 PERM1Q5SV97 790 aa14.79□□□□□ -0.04
SMC1A-204ENST00000463684 NAV2Q8IVL1 2488 aa14.79□□□□□ -0.04
SMC1A-204ENST00000463684 DEFB106AQ8N104 65 aa14.79□□□□□ -0.04
SMC1A-204ENST00000463684 CHST14Q8NCH0 376 aa14.79□□□□□ -0.04
SMC1A-204ENST00000463684 SYNDIG1Q9H7V2 258 aa14.79□□□□□ -0.04
SMC1A-204ENST00000463684 KLF15Q9UIH9 416 aa14.79□□□□□ -0.04
SMC1A-204ENST00000463684 NYNRINQ9P2P1 1898 aaKnown RBP14.78□□□□□ -0.04
SMC1A-204ENST00000463684 EFSO43281 561 aa14.78□□□□□ -0.04
SMC1A-204ENST00000463684 SNAP91O60641 907 aa14.78□□□□□ -0.04
SMC1A-204ENST00000463684 LEFTY1O75610 366 aa14.78□□□□□ -0.04
SMC1A-204ENST00000463684 LETM1O95202 739 aaPredicted RBP14.78□□□□□ -0.04
SMC1A-204ENST00000463684 RHOCP08134 193 aa14.78□□□□□ -0.04
SMC1A-204ENST00000463684 GLI1P08151 1106 aa14.78□□□□□ -0.04
SMC1A-204ENST00000463684 RRM1P23921 792 aa14.78□□□□□ -0.04
SMC1A-204ENST00000463684 IRAK1P51617 712 aa14.78□□□□□ -0.04
SMC1A-204ENST00000463684 KRT85P78386 507 aa14.78□□□□□ -0.04
SMC1A-204ENST00000463684 SRSF1Q07955 248 aaKnown RBP eCLIP14.78□□□□□ -0.043e-7■□□□□ 10.9
SMC1A-204ENST00000463684 NME3Q13232 169 aa14.78□□□□□ -0.04
SMC1A-204ENST00000463684 PKP1Q13835 747 aa14.78□□□□□ -0.04
SMC1A-204ENST00000463684 FGL2Q14314 439 aa14.78□□□□□ -0.04
SMC1A-204ENST00000463684 TAF5Q15542 800 aa14.78□□□□□ -0.04
SMC1A-204ENST00000463684 MEA1Q16626 185 aa14.78□□□□□ -0.04
SMC1A-204ENST00000463684 LINC00303Q3SY05 128 aa14.78□□□□□ -0.04
SMC1A-204ENST00000463684 EFHC1Q5JVL4 640 aa14.78□□□□□ -0.04
SMC1A-204ENST00000463684 ZNF658Q5TYW1 1059 aaPredicted RBP14.78□□□□□ -0.04
SMC1A-204ENST00000463684 ESRP1Q6NXG1 681 aaKnown RBP14.78□□□□□ -0.04
SMC1A-204ENST00000463684 ZSCAN30Q86W11 494 aa14.78□□□□□ -0.04
SMC1A-204ENST00000463684 SGF29Q96ES7 293 aa14.78□□□□□ -0.04
SMC1A-204ENST00000463684 LENG8Q96PV6 779 aaPredicted RBP14.78□□□□□ -0.04
SMC1A-204ENST00000463684 PSMB7Q99436 277 aa14.78□□□□□ -0.04
SMC1A-204ENST00000463684 CCDC3Q9BQI4 270 aa14.78□□□□□ -0.04
SMC1A-204ENST00000463684 BOCQ9BWV1 1114 aa14.78□□□□□ -0.04
SMC1A-204ENST00000463684 SIK2Q9H0K1 926 aa14.78□□□□□ -0.04
SMC1A-204ENST00000463684 TNKS2Q9H2K2 1166 aa14.78□□□□□ -0.04
SMC1A-204ENST00000463684 VPS51Q9UID3 782 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms