RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 RRM1P23921 792 aa20.23■□□□□ 0.83
VARS-221ENST00000463184 APBA1Q02410 837 aa20.23■□□□□ 0.83
VARS-221ENST00000463184 CT47A1Q5JQC4 288 aaPredicted RBP20.23■□□□□ 0.83
VARS-221ENST00000463184 SASS6Q6UVJ0 657 aa20.23■□□□□ 0.83
VARS-221ENST00000463184 LRRC31Q6UY01 552 aa20.23■□□□□ 0.83
VARS-221ENST00000463184 ABI3BPQ7Z7G0 1075 aa20.23■□□□□ 0.83
VARS-221ENST00000463184 ERICH1Q86X53 443 aa20.23■□□□□ 0.83
VARS-221ENST00000463184 DCP2Q8IU60 420 aaKnown RBP20.23■□□□□ 0.83
VARS-221ENST00000463184 ZNF683Q8IZ20 524 aa20.23■□□□□ 0.83
VARS-221ENST00000463184 DCAF4L2Q8NA75 395 aa20.23■□□□□ 0.83
VARS-221ENST00000463184 OR13H1Q8NG92 308 aa20.23■□□□□ 0.83
VARS-221ENST00000463184 PGAP3Q96FM1 320 aaPredicted RBP20.23■□□□□ 0.83
VARS-221ENST00000463184 PPP1R16AQ96I34 528 aa20.23■□□□□ 0.83
VARS-221ENST00000463184 C1orf74Q96LT6 269 aa20.23■□□□□ 0.83
VARS-221ENST00000463184 CALN1Q9BXU9 219 aa20.23■□□□□ 0.83
VARS-221ENST00000463184 FZD3Q9NPG1 666 aa20.23■□□□□ 0.83
VARS-221ENST00000463184 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.23■□□□□ 0.83
VARS-221ENST00000463184 NLGN3Q9NZ94 848 aa20.23■□□□□ 0.83
VARS-221ENST00000463184 IL36AQ9UHA7 158 aa20.23■□□□□ 0.83
VARS-221ENST00000463184 RWDD2AQ9UIY3 292 aa20.23■□□□□ 0.83
VARS-221ENST00000463184 HS3ST3A1Q9Y663 406 aa20.23■□□□□ 0.83
VARS-221ENST00000463184 PTPRQQ9UMZ3 2332 aa20.22■□□□□ 0.83
VARS-221ENST00000463184 GCN1Q92616 2671 aaKnown RBP20.22■□□□□ 0.83
VARS-221ENST00000463184 NEMP2A6NFY4 417 aa20.22■□□□□ 0.83
VARS-221ENST00000463184 FFAR2O15552 330 aa20.22■□□□□ 0.83
VARS-221ENST00000463184 SMAD6O43541 496 aaKnown RBP20.22■□□□□ 0.83
VARS-221ENST00000463184 GP1BAP07359 652 aa20.22■□□□□ 0.83
VARS-221ENST00000463184 GIMD1P0DJR0 217 aa20.22■□□□□ 0.83
VARS-221ENST00000463184 PON1P27169 355 aa20.22■□□□□ 0.83
VARS-221ENST00000463184 RECQLP46063 649 aaPredicted RBP20.22■□□□□ 0.83
VARS-221ENST00000463184 TLE3Q04726 772 aa20.22■□□□□ 0.83
VARS-221ENST00000463184 CCDC173Q0VFZ6 552 aa20.22■□□□□ 0.83
VARS-221ENST00000463184 NFKBIBQ15653 356 aa20.22■□□□□ 0.83
VARS-221ENST00000463184 DPCR1Q3MIW9 517 aa20.22■□□□□ 0.83
VARS-221ENST00000463184 PTPN20Q4JDL3 420 aa20.22■□□□□ 0.83
VARS-221ENST00000463184 ARSIQ5FYB1 569 aa20.22■□□□□ 0.83
VARS-221ENST00000463184 OTUD1Q5VV17 481 aaPredicted RBP20.22■□□□□ 0.83
VARS-221ENST00000463184 CDCP2Q5VXM1 449 aa20.22■□□□□ 0.83
VARS-221ENST00000463184 TMC6Q7Z403 805 aa20.22■□□□□ 0.83
VARS-221ENST00000463184 SPACA3Q8IXA5 215 aa20.22■□□□□ 0.83
VARS-221ENST00000463184 LSMEM2Q8N112 164 aa20.22■□□□□ 0.83
VARS-221ENST00000463184 NT5C3BQ969T7 300 aa20.22■□□□□ 0.83
VARS-221ENST00000463184 ZNF578Q96N58 590 aaPredicted RBP20.22■□□□□ 0.83
VARS-221ENST00000463184 DUSP23Q9BVJ7 150 aa20.22■□□□□ 0.83
VARS-221ENST00000463184 USP29Q9HBJ7 922 aa20.22■□□□□ 0.83
VARS-221ENST00000463184 ANLNQ9NQW6 1124 aa20.22■□□□□ 0.83
VARS-221ENST00000463184 EVA1BQ9NVM1 165 aa20.22■□□□□ 0.83
VARS-221ENST00000463184 ZFR2Q9UPR6 939 aaKnown RBP20.22■□□□□ 0.83
VARS-221ENST00000463184 A0A0D9SEW6 157 aa20.21■□□□□ 0.83
VARS-221ENST00000463184 OPA1O60313 960 aa20.21■□□□□ 0.83
VARS-221ENST00000463184 C1QL1O75973 258 aa20.21■□□□□ 0.83
VARS-221ENST00000463184 CLCN1P35523 988 aa20.21■□□□□ 0.83
VARS-221ENST00000463184 SULT1E1P49888 294 aa20.21■□□□□ 0.83
VARS-221ENST00000463184 DUSP3P51452 185 aaPredicted RBP20.21■□□□□ 0.83
VARS-221ENST00000463184 CLDN2P57739 230 aa20.21■□□□□ 0.83
VARS-221ENST00000463184 RNASE9P60153 205 aaKnown RBP20.21■□□□□ 0.83
VARS-221ENST00000463184 TMEM259Q4ZIN3 620 aa20.21■□□□□ 0.83
VARS-221ENST00000463184 C22orf39Q6P5X5 142 aa20.21■□□□□ 0.83
VARS-221ENST00000463184 LINGO4Q6UY18 593 aa20.21■□□□□ 0.83
VARS-221ENST00000463184 GCNT7Q6ZNI0 430 aa20.21■□□□□ 0.83
VARS-221ENST00000463184 Q6ZSR6 202 aa20.21■□□□□ 0.83
VARS-221ENST00000463184 SLC22A18ASQ8N1D0 253 aa20.21■□□□□ 0.83
VARS-221ENST00000463184 FAM181AQ8N9Y4 354 aa20.21■□□□□ 0.83
VARS-221ENST00000463184 CHST14Q8NCH0 376 aa20.21■□□□□ 0.83
VARS-221ENST00000463184 ZNF248Q8NDW4 579 aa20.21■□□□□ 0.83
VARS-221ENST00000463184 APOLD1Q96LR9 279 aa20.21■□□□□ 0.83
VARS-221ENST00000463184 DEPDC7Q96QD5 511 aa20.21■□□□□ 0.83
VARS-221ENST00000463184 ANO10Q9NW15 660 aa20.21■□□□□ 0.83
VARS-221ENST00000463184 PCDHB1Q9Y5F3 818 aa20.21■□□□□ 0.83
VARS-221ENST00000463184 IGLV3-10A0A075B6K4 115 aa20.2■□□□□ 0.82
VARS-221ENST00000463184 A6NNZ2 444 aa20.2■□□□□ 0.82
VARS-221ENST00000463184 I6L893 689 aaPredicted RBP20.2■□□□□ 0.82
VARS-221ENST00000463184 RNF103O00237 685 aa20.2■□□□□ 0.82
VARS-221ENST00000463184 SCAMP1O15126 338 aa20.2■□□□□ 0.82
VARS-221ENST00000463184 LEFTY1O75610 366 aa20.2■□□□□ 0.82
VARS-221ENST00000463184 TFE3P19532 575 aaPredicted RBP20.2■□□□□ 0.82
VARS-221ENST00000463184 ERCC5P28715 1186 aaPredicted RBP20.2■□□□□ 0.82
VARS-221ENST00000463184 OR1E1P30953 314 aa20.2■□□□□ 0.82
VARS-221ENST00000463184 BPIFB4P59827 614 aa20.2■□□□□ 0.82
VARS-221ENST00000463184 HNRNPKP61978 463 aaKnown RBP eCLIP20.2■□□□□ 0.82
VARS-221ENST00000463184 RPS21P63220 83 aaKnown RBP20.2■□□□□ 0.82
VARS-221ENST00000463184 DEUP1Q05D60 604 aa20.2■□□□□ 0.82
VARS-221ENST00000463184 SLC20A2Q08357 652 aa20.2■□□□□ 0.82
VARS-221ENST00000463184 SEL1L3Q68CR1 1132 aa20.2■□□□□ 0.82
VARS-221ENST00000463184 KIAA1161Q6NSJ0 714 aa20.2■□□□□ 0.82
VARS-221ENST00000463184 RETSATQ6NUM9 610 aa20.2■□□□□ 0.82
VARS-221ENST00000463184 ZNF783Q6ZMS7 281 aa20.2■□□□□ 0.82
VARS-221ENST00000463184 DPY19L3Q6ZPD9 716 aa20.2■□□□□ 0.82
VARS-221ENST00000463184 SLC47A2Q86VL8 602 aa20.2■□□□□ 0.82
VARS-221ENST00000463184 GRIN3AQ8TCU5 1115 aa20.2■□□□□ 0.82
VARS-221ENST00000463184 FEM1CQ96JP0 617 aa20.2■□□□□ 0.82
VARS-221ENST00000463184 LGMNQ99538 433 aa20.2■□□□□ 0.82
VARS-221ENST00000463184 SLC17A9Q9BYT1 436 aa20.2■□□□□ 0.82
VARS-221ENST00000463184 TNKS2Q9H2K2 1166 aa20.2■□□□□ 0.82
VARS-221ENST00000463184 MPP6Q9NZW5 540 aa20.2■□□□□ 0.82
VARS-221ENST00000463184 DNAJC12Q9UKB3 198 aa20.2■□□□□ 0.82
VARS-221ENST00000463184 TDRD6O60522 2096 aaKnown RBP20.19■□□□□ 0.82
VARS-221ENST00000463184 ILVBLA1L0T0 632 aa20.19■□□□□ 0.82
VARS-221ENST00000463184 FOXN3O00409 490 aaPredicted RBP20.19■□□□□ 0.82
VARS-221ENST00000463184 SCNN1AP37088 669 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms