RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 SALL4Q9UJQ4 1053 aa7.93□□□□□ -1.14
SMC3-202ENST00000462899 TRAF3IP3Q9Y228 551 aa7.93□□□□□ -1.14
SMC3-202ENST00000462899 CSNK1G3Q9Y6M4 447 aa7.93□□□□□ -1.14
SMC3-202ENST00000462899 DOPEY1Q5JWR5 2465 aa7.93□□□□□ -1.14
SMC3-202ENST00000462899 OTOGQ6ZRI0 2925 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 SPTY2D1-AS1A0A0U1RR47 76 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 A0A1W2PQU0 124 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 NEMP2A6NFY4 417 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 O00370 1275 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 TPP1O14773 563 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 PPP6R2O75170 966 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 IGLV3-25P01717 112 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 LTFP02788 710 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 SETSIPP0DME0 302 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 SLC5A2P31639 672 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 TBX4P57082 545 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 CLDN2P57739 230 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 HNRNPKP61978 463 aaKnown RBP eCLIP7.92□□□□□ -1.14
SMC3-202ENST00000462899 SERINC3Q13530 473 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 SLC12A1Q13621 1099 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 CLCA4Q14CN2 919 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 TGIF1Q15583 401 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 TBR1Q16650 682 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 FAM46CQ5VWP2 391 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 KYAT3Q6YP21 454 aaKnown RBP7.92□□□□□ -1.14
SMC3-202ENST00000462899 HORMAD1Q86X24 394 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 CFAP52Q8N1V2 620 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 OR52K2Q8NGK3 314 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 DQX1Q8TE96 717 aaKnown RBP7.92□□□□□ -1.14
SMC3-202ENST00000462899 SLC35F5Q8WV83 523 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 OR8D1Q8WZ84 308 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 IRGQQ8WZA9 623 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 EEF2KMTQ96G04 330 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 IPO9Q96P70 1041 aaKnown RBP7.92□□□□□ -1.14
SMC3-202ENST00000462899 CDK15Q96Q40 435 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 PRMT1Q99873 361 aaKnown RBP7.92□□□□□ -1.14
SMC3-202ENST00000462899 MYOCQ99972 504 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 ZSWIM1Q9BR11 485 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 CALN1Q9BXU9 219 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 ABCG4Q9H172 646 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 EPN3Q9H201 632 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 LRRC4Q9HBW1 653 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 GEMIN8Q9NWZ8 242 aaKnown RBP7.92□□□□□ -1.14
SMC3-202ENST00000462899 NCKIPSDQ9NZQ3 722 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 PNMA8BQ9ULN7 279 aaPredicted RBP7.92□□□□□ -1.14
SMC3-202ENST00000462899 TLR6Q9Y2C9 796 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 MAN2B2Q9Y2E5 1009 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 OR51B4Q9Y5P0 310 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 ZFHX3Q15911 3703 aa7.92□□□□□ -1.14
SMC3-202ENST00000462899 ANKRD36A6QL64 1941 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 HIVEP3Q5T1R4 2406 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 RP1L1Q8IWN7 2480 aaPredicted RBP7.91□□□□□ -1.14
SMC3-202ENST00000462899 TYW5A2RUC4 315 aaKnown RBP7.91□□□□□ -1.14
SMC3-202ENST00000462899 POM121BA6NF01 834 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 A6NNZ2 444 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 C1QTNF3-AMACRE9PGA6 284 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 PLD2O14939 933 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 SLC31A1O15431 190 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 SPINT1O43278 529 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 PPFIA2O75334 1257 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 MOCS3O95396 460 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 CENPBP07199 599 aaPredicted RBP7.91□□□□□ -1.14
SMC3-202ENST00000462899 LIPCP11150 499 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 SFTPCP11686 197 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 SYT1P21579 422 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 RPL34P49207 117 aaKnown RBP7.91□□□□□ -1.14
SMC3-202ENST00000462899 INHBCP55103 352 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 SLC8A3P57103 927 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 SULT2A1Q06520 285 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 EIF3IQ13347 325 aaKnown RBP7.91□□□□□ -1.14
SMC3-202ENST00000462899 ZNF542PQ5EBM4 170 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 RNF219Q5W0B1 726 aaPredicted RBP7.91□□□□□ -1.14
SMC3-202ENST00000462899 CEP135Q66GS9 1140 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 SEL1L3Q68CR1 1132 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 KRT39Q6A163 491 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 PMF1Q6P1K2 205 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 CRTC1Q6UUV9 634 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 Q6ZSR6 202 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 Q6ZVU0 165 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 INTS8Q75QN2 995 aaKnown RBP7.91□□□□□ -1.14
SMC3-202ENST00000462899 B3GNT8Q7Z7M8 397 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 DSG4Q86SJ6 1040 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 PARGQ86W56 976 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 DTX1Q86Y01 620 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 DCP2Q8IU60 420 aaKnown RBP7.91□□□□□ -1.14
SMC3-202ENST00000462899 SLC35F3Q8IY50 421 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 GRAMD1CQ8IYS0 662 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 SIX6OS1Q8N1H7 587 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 WDR48Q8TAF3 677 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 KLK6Q92876 244 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 ERCC4Q92889 916 aaPredicted RBP7.91□□□□□ -1.14
SMC3-202ENST00000462899 KLF6Q99612 283 aaPredicted RBP7.91□□□□□ -1.14
SMC3-202ENST00000462899 DDX50Q9BQ39 737 aaKnown RBP7.91□□□□□ -1.14
SMC3-202ENST00000462899 SLC25A18Q9H1K4 315 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 DNAJC28Q9NX36 388 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 MTMR6Q9Y217 621 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 HS3ST3A1Q9Y663 406 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 CELSR1Q9NYQ6 3014 aa7.91□□□□□ -1.14
SMC3-202ENST00000462899 ZNF106Q9H2Y7 1883 aaKnown RBP7.9□□□□□ -1.14
SMC3-202ENST00000462899 SPTLC2O15270 562 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms