RNA–Protein interactions for RNA: ENST00000461990.1

LINC01140-201, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,181 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-201ENST00000461990 RNF170Q96K19 258 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 RIPOR3Q96MK2 946 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 SLITRK1Q96PX8 696 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 MMP19Q99542 508 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 TM9SF2Q99805 663 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 C17orf62Q9BQA9 187 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 MUC3BQ9H195 1237 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 PNPOQ9NVS9 261 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 MCM9Q9NXL9 1143 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 IFT80Q9P2H3 777 aaPredicted RBP9.35□□□□□ -0.91
LINC01140-201ENST00000461990 LRP2BPQ9P2M1 347 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 RIPK3Q9Y572 518 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 NHSQ6T4R5 1651 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 A0A0X1KG70 313 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 POTEB3A0JP26 581 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 CENPXA8MT69 81 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 USP17L12C9JPN9 530 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 USP17L21D6R901 530 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 SOCS7O14512 581 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 RAD51BO15315 384 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 AVILO75366 819 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 TOM1L1O75674 476 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 CYP11B1P15538 503 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 GAP43P17677 238 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 FGFR3P22607 806 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 RFC4P35249 363 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 CAPGP40121 348 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 CTSWP56202 376 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 TAS2R40P59535 323 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 POTEBQ6S5H4 581 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 CRTC3Q6UUV7 619 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 CYP20A1Q6UW02 462 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 ATG14Q6ZNE5 492 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 PIWIL3Q7Z3Z3 882 aaKnown RBP9.34□□□□□ -0.91
LINC01140-201ENST00000461990 IGDCC3Q8IVU1 814 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 SFRP1Q8N474 314 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.34□□□□□ -0.91
LINC01140-201ENST00000461990 GLMNQ92990 594 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 SH3KBP1Q96B97 665 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 BTBD2Q9BX70 525 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 EHMT1Q9H9B1 1298 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 POLE4Q9NR33 117 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 TMEM260Q9NX78 707 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 SARDHQ9UL12 918 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 VPS4AQ9UN37 437 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 PCDHGB3Q9Y5G1 929 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 KCPQ6ZWJ8 1503 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 ARPC4-TTLL3A0A0A6YYG9 625 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 SAC3D1A6NKF1 404 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 PI4K2BG5E9Z4 385 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 SLITRK5O94991 958 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 VAPBO95292 243 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 TRAPPC2P0DI81 140 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 TRAPPC2BP0DI82 140 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 UNGP13051 313 aaPredicted RBP9.34□□□□□ -0.91
LINC01140-201ENST00000461990 MAPRE2Q15555 327 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 ATP6AP1Q15904 470 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 PLA2G4EQ3MJ16 856 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 LEXMQ3ZCV2 418 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 ZFP69Q49AA0 526 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 DCUN1D2Q6PH85 259 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 PRSS48Q7RTY5 328 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 SLC47A2Q86VL8 602 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 WDR49Q8IV35 697 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 MCOLN2Q8IZK6 566 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 DEPDC4Q8N2C3 294 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 ZSWIM2Q8NEG5 633 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 BPIFB6Q8NFQ5 453 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 TTLQ8NG68 377 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 PIK3R3Q92569 461 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 PBXIP1Q96AQ6 731 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 TMEM80Q96HE8 168 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 ACO2Q99798 780 aaKnown RBP9.34□□□□□ -0.91
LINC01140-201ENST00000461990 FUNDC2Q9BWH2 189 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 ZBTB3Q9H5J0 574 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 EFCAB1Q9HAE3 211 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 NECTIN3Q9NQS3 549 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 CDY2AQ9Y6F7 541 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 CDY1Q9Y6F8 540 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 DDX60LQ5H9U9 1706 aaKnown RBP9.34□□□□□ -0.91
LINC01140-201ENST00000461990 TCP10L2B9ZVM9 353 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 KBTBD13C9JR72 458 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 RIMBP2O15034 1052 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 TRIM24O15164 1050 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 TMEM63AO94886 807 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 GABARAPO95166 117 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 RASAL1O95294 804 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 TRIM49P0CI25 452 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 TRIM49CP0CI26 452 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 ICAM2P13598 275 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 CKMT2P17540 419 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 ELK3P41970 407 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 ECE1P42892 770 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 ABCE1P61221 599 aaKnown RBP9.34□□□□□ -0.91
LINC01140-201ENST00000461990 IKQ13123 557 aaPredicted RBP9.34□□□□□ -0.91
LINC01140-201ENST00000461990 DSC3Q14574 896 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 DGUOKQ16854 277 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 RSBN1LQ6PCB5 846 aaPredicted RBP9.34□□□□□ -0.91
LINC01140-201ENST00000461990 STXBP4Q6ZWJ1 553 aa9.34□□□□□ -0.91
LINC01140-201ENST00000461990 EPHX4Q8IUS5 362 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms