RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 CCDC114Q96M63 670 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 CEP44Q9C0F1 390 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 PREBQ9HCU5 417 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 METTL5Q9NRN9 209 aaKnown RBP9.37□□□□□ -0.91
BRCA1-207ENST00000461798 TOR4AQ9NXH8 423 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 OR12D3Q9UGF7 316 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 BTBD3Q9Y2F9 522 aa9.37□□□□□ -0.91
BRCA1-207ENST00000461798 IGF2RP11717 2491 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 TCRBV5S1A1TA0A578 114 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 SIGLEC16A6NMB1 481 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 TLR4O00206 839 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 PLK4O00444 970 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 YKT6O15498 198 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 TNFSF14O43557 240 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 MAGEC1O60732 1142 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 PRNPP04156 253 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 CALB1P05937 261 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 CTSLP07711 333 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 ATXN1LP0C7T5 689 aaKnown RBP9.36□□□□□ -0.91
BRCA1-207ENST00000461798 KRT3P12035 628 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 RHOQP17081 205 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 CDK11BP21127 795 aaKnown RBP9.36□□□□□ -0.91
BRCA1-207ENST00000461798 SDC4P31431 198 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 RFC1P35251 1148 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-207ENST00000461798 NSFP46459 744 aaKnown RBP9.36□□□□□ -0.91
BRCA1-207ENST00000461798 NUMBP49757 651 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 NXPH1P58417 271 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 PPP2CBP62714 309 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 PPP2CAP67775 309 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 ATP11AP98196 1134 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 GNA12Q03113 381 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 UBXN1Q04323 297 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 SCAPQ12770 1279 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 CLEC16AQ2KHT3 1053 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 SLC45A4Q5BKX6 768 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 CCDC183Q5T5S1 534 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 PIP5KL1Q5T9C9 394 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 WDR59Q6PJI9 974 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 TMPRSS7Q7RTY8 843 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 TFAP2DQ7Z6R9 452 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 NLRP14Q86W24 1093 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 OXR1Q8N573 874 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 PNPLA1Q8N8W4 532 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 C3orf20Q8ND61 904 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 OR7D4Q8NG98 312 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 JOSD2Q8TAC2 188 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 SAP25Q8TEE9 199 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 ISG20Q96AZ6 181 aaKnown RBP9.36□□□□□ -0.91
BRCA1-207ENST00000461798 C11orf70Q9BRQ4 267 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 SPON2Q9BUD6 331 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 HDAC8Q9BY41 377 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 GDF3Q9NR23 364 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 AASDHPPTQ9NRN7 309 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 ADAM22Q9P0K1 906 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 ZMIZ1Q9ULJ6 1067 aa9.36□□□□□ -0.91
BRCA1-207ENST00000461798 GOLGA8CPA6NN73 597 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 FAM72CH0Y354 149 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 PRAMEF26H0Y7S4 382 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 CBX4O00257 560 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 CD160O95971 181 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 CCDC172P0C7W6 258 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 GLDCP23378 1020 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 RRM1P23921 792 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 ETFBP38117 255 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 MAPKAPK2P49137 400 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 SERPINH1P50454 418 aaKnown RBP9.35□□□□□ -0.91
BRCA1-207ENST00000461798 HDAC4P56524 1084 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 ARF5P84085 180 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 STAT4Q14765 748 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 C15orf59Q2T9L4 293 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-207ENST00000461798 INAVAQ3KP66 663 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 SETMARQ53H47 684 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-207ENST00000461798 RAB6CQ53S08 254 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 CARD16Q5EG05 197 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 PRAMEF14Q5SWL7 426 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 FAM72AQ5TYM5 149 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 FAM72DQ6L9T8 149 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 C22orf39Q6P5X5 142 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 LINGO4Q6UY18 593 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 DPY19L3Q6ZPD9 716 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 MON1BQ7L1V2 547 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 IRF2BP2Q7Z5L9 587 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 FAM72BQ86X60 149 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 SPATS2Q86XZ4 545 aaKnown RBP9.35□□□□□ -0.91
BRCA1-207ENST00000461798 PCDH20Q8N6Y1 951 aaKnown RBP9.35□□□□□ -0.91
BRCA1-207ENST00000461798 TMEM145Q8NBT3 493 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 CHST14Q8NCH0 376 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 ARRDC3Q96B67 414 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 PCMTD1Q96MG8 357 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-207ENST00000461798 AGPAT1Q99943 283 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 BPIFA3Q9BQP9 254 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 SYT11Q9BT88 431 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 RAB6CQ9H0N0 254 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 MAGEH1Q9H213 219 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 TMEM248Q9NWD8 314 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 MYO6Q9UM54 1294 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 NEU3Q9UQ49 428 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 PCDHGA1Q9Y5H4 931 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 WASF2Q9Y6W5 498 aa9.35□□□□□ -0.91
BRCA1-207ENST00000461798 FAM170AA1A519 330 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms