RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 LAYNQ6UX15 382 aa4.28□□□□□ -1.72
ECHDC1-211ENST00000460558 CEP128Q6ZU80 1094 aa4.28□□□□□ -1.72
ECHDC1-211ENST00000460558 OTUD6AQ7L8S5 288 aa4.28□□□□□ -1.72
ECHDC1-211ENST00000460558 APBB1IPQ7Z5R6 666 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-211ENST00000460558 RALYLQ86SE5 291 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-211ENST00000460558 ZZZ3Q8IYH5 903 aa4.28□□□□□ -1.72
ECHDC1-211ENST00000460558 SLC34A3Q8N130 599 aa4.28□□□□□ -1.72
ECHDC1-211ENST00000460558 ARL14Q8N4G2 192 aa4.28□□□□□ -1.72
ECHDC1-211ENST00000460558 NETO2Q8NC67 525 aa4.28□□□□□ -1.72
ECHDC1-211ENST00000460558 SAP25Q8TEE9 199 aa4.28□□□□□ -1.72
ECHDC1-211ENST00000460558 LENG9Q96B70 501 aa4.28□□□□□ -1.72
ECHDC1-211ENST00000460558 SKA1Q96BD8 255 aa4.28□□□□□ -1.72
ECHDC1-211ENST00000460558 ERLEC1Q96DZ1 483 aa4.28□□□□□ -1.72
ECHDC1-211ENST00000460558 SPOCK3Q9BQ16 436 aa4.28□□□□□ -1.72
ECHDC1-211ENST00000460558 PLCD4Q9BRC7 762 aa4.28□□□□□ -1.72
ECHDC1-211ENST00000460558 NUP58Q9BVL2 599 aa4.28□□□□□ -1.72
ECHDC1-211ENST00000460558 ACE2Q9BYF1 805 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-211ENST00000460558 SLC6A17Q9H1V8 727 aa4.28□□□□□ -1.72
ECHDC1-211ENST00000460558 PDZD7Q9H5P4 517 aa4.28□□□□□ -1.72
ECHDC1-211ENST00000460558 ARNT2Q9HBZ2 717 aa4.28□□□□□ -1.72
ECHDC1-211ENST00000460558 CD248Q9HCU0 757 aa4.28□□□□□ -1.72
ECHDC1-211ENST00000460558 TRPC7Q9HCX4 862 aa4.28□□□□□ -1.72
ECHDC1-211ENST00000460558 ITM2CQ9NQX7 267 aa4.28□□□□□ -1.72
ECHDC1-211ENST00000460558 C19orf73Q9NVV2 129 aa4.28□□□□□ -1.72
ECHDC1-211ENST00000460558 DONSONQ9NYP3 566 aa4.28□□□□□ -1.72
ECHDC1-211ENST00000460558 UXTQ9UBK9 157 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-211ENST00000460558 TUBD1Q9UJT1 453 aa4.28□□□□□ -1.72
ECHDC1-211ENST00000460558 PHTF1Q9UMS5 762 aa4.28□□□□□ -1.72
ECHDC1-211ENST00000460558 VPS4AQ9UN37 437 aa4.28□□□□□ -1.72
ECHDC1-211ENST00000460558 SATB2Q9UPW6 733 aa4.28□□□□□ -1.72
ECHDC1-211ENST00000460558 LUC7L2Q9Y383 392 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-211ENST00000460558 ATP23Q9Y6H3 246 aa4.28□□□□□ -1.72
ECHDC1-211ENST00000460558 UBE4BO95155 1302 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 FITM1A5D6W6 292 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 GOLGA6CA6NDK9 693 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 GOLGA6BA6NDN3 693 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 LRRIQ4A6NIV6 560 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 FAM90A27PA6NNH2 459 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 M0QZQ0 153 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 HGSO14964 777 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 VILLO15195 856 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 MTSS1O43312 755 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 HNRNPRO43390 633 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 HIP1RO75146 1068 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 SEMA7AO75326 666 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 PSMD10O75832 226 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 ZRANB2O95218 330 aaKnown RBP eCLIP4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 MT-CO1P00395 513 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 HPXP02790 462 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 GOLGA6DP0CG33 693 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 RNF224P0DH78 156 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 CSH1P0DML2 217 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 CSH2P0DML3 217 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 ACADMP11310 421 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 HMGA1P17096 107 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 PTPN1P18031 435 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 CD40P25942 277 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 EPHA8P29322 1005 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 YWHABP31946 246 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 HSPA4P34932 840 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 UQCRFS1P47985 274 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 RPL10AP62906 217 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 ATP2C1P98194 919 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 DMP1Q13316 513 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 PRPF4BQ13523 1007 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 ODF1Q14990 250 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 CLCA4Q14CN2 919 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 FAM187BQ17R55 369 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 ZXDCQ2QGD7 858 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 XKR9Q5GH70 373 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 KCNT1Q5JUK3 1230 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 STEAP3Q658P3 488 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 CPZQ66K79 652 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 CAPRIN2Q6IMN6 1127 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 FRMD7Q6ZUT3 714 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 CLEC14AQ86T13 490 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 HEATR4Q86WZ0 1026 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 MIB1Q86YT6 1006 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 SPPL2CQ8IUH8 684 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 ZBTB8OSQ8IWT0 167 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 CMIPQ8IY22 773 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 ADGRG2Q8IZP9 1017 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 TMEM151AQ8N4L1 468 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 ARL14EPQ8N8R7 260 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 FSIP1Q8NA03 581 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 TERB1Q8NA31 727 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 OTUD7AQ8TE49 926 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 GRAMD1AQ96CP6 724 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 AIFM3Q96NN9 605 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 CYP2S1Q96SQ9 504 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 GABRG3Q99928 467 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 FUCA2Q9BTY2 467 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 CCDC94Q9BW85 323 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 CD244Q9BZW8 370 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 ZNF700Q9H0M5 742 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 MS4A5Q9H3V2 200 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 PCIF1Q9H4Z3 704 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 RPF1Q9H9Y2 349 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 C6orf50Q9HD87 102 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms