RNA–Protein interactions for RNA: ENST00000460366.5

VPS45-204, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-204ENST00000460366 FTCDO95954 541 aa10.14□□□□□ -0.79
VPS45-204ENST00000460366 AVPP01185 164 aa10.14□□□□□ -0.79
VPS45-204ENST00000460366 TNNT1P13805 278 aa10.14□□□□□ -0.79
VPS45-204ENST00000460366 MSNP26038 577 aaKnown RBP10.14□□□□□ -0.79
VPS45-204ENST00000460366 ACVRL1P37023 503 aa10.14□□□□□ -0.79
VPS45-204ENST00000460366 IL12RB1P42701 662 aa10.14□□□□□ -0.79
VPS45-204ENST00000460366 CTSOP43234 321 aaPredicted RBP10.14□□□□□ -0.79
VPS45-204ENST00000460366 PAPOLAP51003 745 aaKnown RBP10.14□□□□□ -0.79
VPS45-204ENST00000460366 SH3BP2P78314 561 aa10.14□□□□□ -0.79
VPS45-204ENST00000460366 CAMK2GQ13555 558 aaPredicted RBP10.14□□□□□ -0.79
VPS45-204ENST00000460366 STARD3Q14849 445 aa10.14□□□□□ -0.79
VPS45-204ENST00000460366 HNRNPA1L2Q32P51 320 aaKnown RBP10.14□□□□□ -0.79
VPS45-204ENST00000460366 FNDC3BQ53EP0 1204 aaKnown RBP10.14□□□□□ -0.79
VPS45-204ENST00000460366 HS1BP3Q53T59 392 aa10.14□□□□□ -0.79
VPS45-204ENST00000460366 INO80DQ53TQ3 878 aaPredicted RBP10.14□□□□□ -0.79
VPS45-204ENST00000460366 TFDP3Q5H9I0 405 aa10.14□□□□□ -0.79
VPS45-204ENST00000460366 TMCO4Q5TGY1 634 aa10.14□□□□□ -0.79
VPS45-204ENST00000460366 NCBP2-AS2Q69YL0 99 aa10.14□□□□□ -0.79
VPS45-204ENST00000460366 PKN3Q6P5Z2 889 aa10.14□□□□□ -0.79
VPS45-204ENST00000460366 SERPINA13PQ6UXR4 307 aa10.14□□□□□ -0.79
VPS45-204ENST00000460366 SPOCD1Q6ZMY3 1216 aa10.14□□□□□ -0.79
VPS45-204ENST00000460366 BZW1Q7L1Q6 419 aaKnown RBP10.14□□□□□ -0.79
VPS45-204ENST00000460366 SH2D3CQ8N5H7 860 aa10.14□□□□□ -0.79
VPS45-204ENST00000460366 NPWQ8N729 165 aa10.14□□□□□ -0.79
VPS45-204ENST00000460366 FRS2Q8WU20 508 aa10.14□□□□□ -0.79
VPS45-204ENST00000460366 FATE1Q969F0 183 aa10.14□□□□□ -0.79
VPS45-204ENST00000460366 ISG20Q96AZ6 181 aaKnown RBP10.14□□□□□ -0.79
VPS45-204ENST00000460366 HMCESQ96FZ2 354 aa10.14□□□□□ -0.79
VPS45-204ENST00000460366 TSGA13Q96PP4 275 aa10.14□□□□□ -0.79
VPS45-204ENST00000460366 FAM126AQ9BYI3 521 aaPredicted RBP10.14□□□□□ -0.79
VPS45-204ENST00000460366 FAM117AQ9C073 453 aa10.14□□□□□ -0.79
VPS45-204ENST00000460366 CEP44Q9C0F1 390 aa10.14□□□□□ -0.79
VPS45-204ENST00000460366 CD248Q9HCU0 757 aa10.14□□□□□ -0.79
VPS45-204ENST00000460366 POLMQ9NP87 494 aaPredicted RBP10.14□□□□□ -0.79
VPS45-204ENST00000460366 ETNK2Q9NVF9 386 aa10.14□□□□□ -0.79
VPS45-204ENST00000460366 KLHL11Q9NVR0 708 aa10.14□□□□□ -0.79
VPS45-204ENST00000460366 CACNA2D2Q9NY47 1150 aa10.14□□□□□ -0.79
VPS45-204ENST00000460366 SLCO3A1Q9UIG8 710 aa10.14□□□□□ -0.79
VPS45-204ENST00000460366 MUC3AQ02505 3323 aa10.14□□□□□ -0.79
VPS45-204ENST00000460366 MIA3Q5JRA6 1907 aa10.13□□□□□ -0.79
VPS45-204ENST00000460366 EDDM13A0A1B0GTR0 161 aa10.13□□□□□ -0.79
VPS45-204ENST00000460366 K7ESF4 209 aa10.13□□□□□ -0.79
VPS45-204ENST00000460366 APOL1O14791 398 aa10.13□□□□□ -0.79
VPS45-204ENST00000460366 DDX3YO15523 660 aaKnown RBP10.13□□□□□ -0.79
VPS45-204ENST00000460366 PRAMEF11O60813 436 aa10.13□□□□□ -0.79
VPS45-204ENST00000460366 ALDH1A2O94788 518 aa10.13□□□□□ -0.79
VPS45-204ENST00000460366 APBB3O95704 486 aa10.13□□□□□ -0.79
VPS45-204ENST00000460366 MT-CO1P00395 513 aa10.13□□□□□ -0.79
VPS45-204ENST00000460366 HOXB2P14652 356 aa10.13□□□□□ -0.79
VPS45-204ENST00000460366 MX2P20592 715 aa10.13□□□□□ -0.79
VPS45-204ENST00000460366 PRKCHP24723 683 aa10.13□□□□□ -0.79
VPS45-204ENST00000460366 MARCKSL1P49006 195 aa10.13□□□□□ -0.79
VPS45-204ENST00000460366 NR2C2P49116 596 aa10.13□□□□□ -0.79
VPS45-204ENST00000460366 SERPINH1P50454 418 aaKnown RBP10.13□□□□□ -0.79
VPS45-204ENST00000460366 NRLP54845 237 aa10.13□□□□□ -0.79
VPS45-204ENST00000460366 ARF5P84085 180 aa10.13□□□□□ -0.79
VPS45-204ENST00000460366 SATB1Q01826 763 aa10.13□□□□□ -0.79
VPS45-204ENST00000460366 ZNF33AQ06730 810 aa10.13□□□□□ -0.79
VPS45-204ENST00000460366 IL10RBQ08334 325 aa10.13□□□□□ -0.79
VPS45-204ENST00000460366 GALNT2Q10471 571 aa10.13□□□□□ -0.79
VPS45-204ENST00000460366 RFTN1Q14699 578 aaPredicted RBP10.13□□□□□ -0.79
VPS45-204ENST00000460366 RPS6KA1Q15418 735 aa10.13□□□□□ -0.79
VPS45-204ENST00000460366 ZNF528Q3MIS6 628 aa10.13□□□□□ -0.79
VPS45-204ENST00000460366 LINC01559Q495D7 138 aa10.13□□□□□ -0.79
VPS45-204ENST00000460366 MEI1Q5TIA1 1274 aa10.13□□□□□ -0.79
VPS45-204ENST00000460366 MAML2Q8IZL2 1156 aaPredicted RBP10.13□□□□□ -0.79
VPS45-204ENST00000460366 PLD5Q8N7P1 536 aa10.13□□□□□ -0.79
VPS45-204ENST00000460366 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.13□□□□□ -0.79
VPS45-204ENST00000460366 ALG3Q92685 438 aa10.13□□□□□ -0.79
VPS45-204ENST00000460366 CELF6Q96J87 481 aaKnown RBP10.13□□□□□ -0.79
VPS45-204ENST00000460366 RPL10LQ96L21 214 aaKnown RBP10.13□□□□□ -0.79
VPS45-204ENST00000460366 ZNF599Q96NL3 588 aa10.13□□□□□ -0.79
VPS45-204ENST00000460366 BRD8Q9H0E9 1235 aa10.13□□□□□ -0.79
VPS45-204ENST00000460366 EBF1Q9UH73 591 aa10.13□□□□□ -0.79
VPS45-204ENST00000460366 IPO11Q9UI26 975 aaKnown RBP10.13□□□□□ -0.79
VPS45-204ENST00000460366 PYCARDQ9ULZ3 195 aa10.13□□□□□ -0.79
VPS45-204ENST00000460366 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.13□□□□□ -0.79
VPS45-204ENST00000460366 CHD5Q8TDI0 1954 aa10.13□□□□□ -0.79
VPS45-204ENST00000460366 ATG2BQ96BY7 2078 aa10.12□□□□□ -0.79
VPS45-204ENST00000460366 hCG_1818297A0A087WSY0 165 aa10.12□□□□□ -0.79
VPS45-204ENST00000460366 TTC34A8MYJ7 566 aa10.12□□□□□ -0.79
VPS45-204ENST00000460366 WASH3PC4AMC7 463 aa10.12□□□□□ -0.79
VPS45-204ENST00000460366 KIF5CO60282 957 aa10.12□□□□□ -0.79
VPS45-204ENST00000460366 CD160O95971 181 aa10.12□□□□□ -0.79
VPS45-204ENST00000460366 F12P00748 615 aaPredicted RBP10.12□□□□□ -0.79
VPS45-204ENST00000460366 EPHX1P07099 455 aa10.12□□□□□ -0.79
VPS45-204ENST00000460366 PYGMP11217 842 aa10.12□□□□□ -0.79
VPS45-204ENST00000460366 SRCP12931 536 aa10.12□□□□□ -0.79
VPS45-204ENST00000460366 TDGF1P13385 188 aa10.12□□□□□ -0.79
VPS45-204ENST00000460366 TGM2P21980 687 aa10.12□□□□□ -0.79
VPS45-204ENST00000460366 GLDCP23378 1020 aa10.12□□□□□ -0.79
VPS45-204ENST00000460366 WASP42768 502 aa10.12□□□□□ -0.79
VPS45-204ENST00000460366 STK19P49842 368 aaPredicted RBP10.12□□□□□ -0.79
VPS45-204ENST00000460366 DLG2Q15700 870 aa10.12□□□□□ -0.79
VPS45-204ENST00000460366 C9orf64Q5T6V5 341 aa10.12□□□□□ -0.79
VPS45-204ENST00000460366 BBS12Q6ZW61 710 aa10.12□□□□□ -0.79
VPS45-204ENST00000460366 RASSF3Q86WH2 238 aa10.12□□□□□ -0.79
VPS45-204ENST00000460366 RFX6Q8HWS3 928 aa10.12□□□□□ -0.79
VPS45-204ENST00000460366 PCDH20Q8N6Y1 951 aaKnown RBP10.12□□□□□ -0.79
VPS45-204ENST00000460366 ATP11CQ8NB49 1132 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms