RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 MT-CO1P00395 513 aa15.26■□□□□ 0.03
ATG4B-213ENST00000460211 VAV1P15498 845 aa15.26■□□□□ 0.03
ATG4B-213ENST00000460211 ACSL1P33121 698 aa15.26■□□□□ 0.03
ATG4B-213ENST00000460211 ACVRL1P37023 503 aa15.26■□□□□ 0.03
ATG4B-213ENST00000460211 CCDC15Q0P6D6 951 aa15.26■□□□□ 0.03
ATG4B-213ENST00000460211 TRIM61Q5EBN2 209 aa15.26■□□□□ 0.03
ATG4B-213ENST00000460211 DCAF12L1Q5VU92 463 aa15.26■□□□□ 0.03
ATG4B-213ENST00000460211 SLC41A1Q8IVJ1 513 aa15.26■□□□□ 0.03
ATG4B-213ENST00000460211 HDDC3Q8N4P3 179 aa15.26■□□□□ 0.03
ATG4B-213ENST00000460211 ARHGEF2Q92974 986 aaKnown RBP15.26■□□□□ 0.03
ATG4B-213ENST00000460211 SNRNP25Q9BV90 132 aaKnown RBP15.26■□□□□ 0.03
ATG4B-213ENST00000460211 RBSNQ9H1K0 784 aa15.26■□□□□ 0.03
ATG4B-213ENST00000460211 NDFIP2Q9NV92 336 aa15.26■□□□□ 0.03
ATG4B-213ENST00000460211 GPATCH2LQ9NWQ4 482 aa15.26■□□□□ 0.03
ATG4B-213ENST00000460211 CTTNBP2NLQ9P2B4 639 aa15.26■□□□□ 0.03
ATG4B-213ENST00000460211 UVRAGQ9P2Y5 699 aa15.26■□□□□ 0.03
ATG4B-213ENST00000460211 FZD4Q9ULV1 537 aa15.26■□□□□ 0.03
ATG4B-213ENST00000460211 IGF2RP11717 2491 aa15.26■□□□□ 0.03
ATG4B-213ENST00000460211 LRRC72A6NJI9 287 aa15.25■□□□□ 0.03
ATG4B-213ENST00000460211 CDX4O14627 284 aaPredicted RBP15.25■□□□□ 0.03
ATG4B-213ENST00000460211 ZMPSTE24O75844 475 aa15.25■□□□□ 0.03
ATG4B-213ENST00000460211 PRNPP04156 253 aa15.25■□□□□ 0.03
ATG4B-213ENST00000460211 CFIP05156 583 aa15.25■□□□□ 0.03
ATG4B-213ENST00000460211 GOT1P17174 413 aa15.25■□□□□ 0.03
ATG4B-213ENST00000460211 GLDCP23378 1020 aa15.25■□□□□ 0.03
ATG4B-213ENST00000460211 SSR1P43307 286 aaKnown RBP15.25■□□□□ 0.03
ATG4B-213ENST00000460211 SERPINH1P50454 418 aaKnown RBP15.25■□□□□ 0.03
ATG4B-213ENST00000460211 IRX4P78413 519 aa15.25■□□□□ 0.03
ATG4B-213ENST00000460211 TBX2Q13207 712 aaPredicted RBP15.25■□□□□ 0.03
ATG4B-213ENST00000460211 SEMA3BQ13214 749 aa15.25■□□□□ 0.03
ATG4B-213ENST00000460211 HADHQ16836 314 aaKnown RBP15.25■□□□□ 0.03
ATG4B-213ENST00000460211 PARP15Q460N3 678 aa15.25■□□□□ 0.03
ATG4B-213ENST00000460211 PEAR1Q5VY43 1037 aaPredicted RBP15.25■□□□□ 0.03
ATG4B-213ENST00000460211 C22orf39Q6P5X5 142 aa15.25■□□□□ 0.03
ATG4B-213ENST00000460211 ARFGAP1Q8N6T3 406 aa15.25■□□□□ 0.03
ATG4B-213ENST00000460211 PCDH20Q8N6Y1 951 aaKnown RBP15.25■□□□□ 0.03
ATG4B-213ENST00000460211 NIPA2Q8N8Q9 360 aa15.25■□□□□ 0.03
ATG4B-213ENST00000460211 DEFB124Q8NES8 71 aa15.25■□□□□ 0.03
ATG4B-213ENST00000460211 ZNF564Q8TBZ8 553 aaPredicted RBP15.25■□□□□ 0.03
ATG4B-213ENST00000460211 DNASE2BQ8WZ79 361 aa15.25■□□□□ 0.03
ATG4B-213ENST00000460211 SCNM1Q9BWG6 230 aa15.25■□□□□ 0.03
ATG4B-213ENST00000460211 NEUROG2Q9H2A3 272 aa15.25■□□□□ 0.03
ATG4B-213ENST00000460211 ZWILCHQ9H900 591 aa15.25■□□□□ 0.03
ATG4B-213ENST00000460211 NHEJ1Q9H9Q4 299 aaPredicted RBP15.25■□□□□ 0.03
ATG4B-213ENST00000460211 TMEM74BQ9NUR3 256 aa15.25■□□□□ 0.03
ATG4B-213ENST00000460211 PPM1HQ9ULR3 514 aa15.25■□□□□ 0.03
ATG4B-213ENST00000460211 SLC6A14Q9UN76 642 aa15.25■□□□□ 0.03
ATG4B-213ENST00000460211 WASF3Q9UPY6 502 aa15.25■□□□□ 0.03
ATG4B-213ENST00000460211 NEU3Q9UQ49 428 aa15.25■□□□□ 0.03
ATG4B-213ENST00000460211 PLXND1Q9Y4D7 1925 aa15.25■□□□□ 0.03
ATG4B-213ENST00000460211 MUC22E2RYF6 1773 aaPredicted RBP15.24■□□□□ 0.03
ATG4B-213ENST00000460211 ATXN2Q99700 1313 aaKnown RBP15.24■□□□□ 0.03
ATG4B-213ENST00000460211 FAM47DPA6NHR8 397 aa15.24■□□□□ 0.03
ATG4B-213ENST00000460211 H3BRJ5 948 aa15.24■□□□□ 0.03
ATG4B-213ENST00000460211 K7ERQ8 282 aa15.24■□□□□ 0.03
ATG4B-213ENST00000460211 SLC7A4O43246 635 aa15.24■□□□□ 0.03
ATG4B-213ENST00000460211 BUB1O43683 1085 aa15.24■□□□□ 0.03
ATG4B-213ENST00000460211 KDELR3O43731 214 aa15.24■□□□□ 0.03
ATG4B-213ENST00000460211 SERPINF2P08697 491 aa15.24■□□□□ 0.03
ATG4B-213ENST00000460211 CHRNA3P32297 505 aa15.24■□□□□ 0.03
ATG4B-213ENST00000460211 ARL4AP40617 200 aa15.24■□□□□ 0.03
ATG4B-213ENST00000460211 HCAR3P49019 387 aa15.24■□□□□ 0.03
ATG4B-213ENST00000460211 DNA2P51530 1060 aa15.24■□□□□ 0.03
ATG4B-213ENST00000460211 ATXN3P54252 364 aaPredicted RBP15.24■□□□□ 0.03
ATG4B-213ENST00000460211 ARF5P84085 180 aa15.24■□□□□ 0.03
ATG4B-213ENST00000460211 ASTE1Q2TB18 679 aaPredicted RBP15.24■□□□□ 0.03
ATG4B-213ENST00000460211 PPP6R3Q5H9R7 873 aaPredicted RBP15.24■□□□□ 0.03
ATG4B-213ENST00000460211 SLC23A3Q6PIS1 610 aa15.24■□□□□ 0.03
ATG4B-213ENST00000460211 UMODL1-AS1Q8N2C9 162 aa15.24■□□□□ 0.03
ATG4B-213ENST00000460211 KDF1Q8NAX2 398 aaPredicted RBP15.24■□□□□ 0.03
ATG4B-213ENST00000460211 OR2A12Q8NGT7 310 aa15.24■□□□□ 0.03
ATG4B-213ENST00000460211 PIP4K2CQ8TBX8 421 aa15.24■□□□□ 0.03
ATG4B-213ENST00000460211 CASKIN2Q8WXE0 1202 aa15.24■□□□□ 0.03
ATG4B-213ENST00000460211 SNX19Q92543 992 aa15.24■□□□□ 0.03
ATG4B-213ENST00000460211 ARHGEF26Q96DR7 871 aa15.24■□□□□ 0.03
ATG4B-213ENST00000460211 PEBP4Q96S96 227 aa15.24■□□□□ 0.03
ATG4B-213ENST00000460211 CHP1Q99653 195 aa15.24■□□□□ 0.03
ATG4B-213ENST00000460211 MIR1-1HGQ9H1L0 117 aa15.24■□□□□ 0.03
ATG4B-213ENST00000460211 DYRK4Q9NR20 520 aa15.24■□□□□ 0.03
ATG4B-213ENST00000460211 TPX2Q9ULW0 747 aaKnown RBP15.24■□□□□ 0.03
ATG4B-213ENST00000460211 NENFQ9UMX5 172 aa15.24■□□□□ 0.03
ATG4B-213ENST00000460211 WDFY3Q8IZQ1 3526 aa15.24■□□□□ 0.03
ATG4B-213ENST00000460211 ATRXP46100 2492 aa15.23■□□□□ 0.03
ATG4B-213ENST00000460211 A0A1B0GTW7 788 aa15.23■□□□□ 0.03
ATG4B-213ENST00000460211 RASA4BC9J798 803 aa15.23■□□□□ 0.03
ATG4B-213ENST00000460211 RASA4O43374 803 aa15.23■□□□□ 0.03
ATG4B-213ENST00000460211 SMAD6O43541 496 aaKnown RBP15.23■□□□□ 0.03
ATG4B-213ENST00000460211 FSBPO95073 299 aa15.23■□□□□ 0.03
ATG4B-213ENST00000460211 SYPP08247 313 aa15.23■□□□□ 0.03
ATG4B-213ENST00000460211 TMEM253P0C7T8 217 aa15.23■□□□□ 0.03
ATG4B-213ENST00000460211 CEACAM1P13688 526 aa15.23■□□□□ 0.03
ATG4B-213ENST00000460211 MAOBP27338 520 aa15.23■□□□□ 0.03
ATG4B-213ENST00000460211 MAPK8P45983 427 aa15.23■□□□□ 0.03
ATG4B-213ENST00000460211 ZNF75DP51815 510 aa15.23■□□□□ 0.03
ATG4B-213ENST00000460211 NDST2P52849 883 aa15.23■□□□□ 0.03
ATG4B-213ENST00000460211 CA9Q16790 459 aa15.23■□□□□ 0.03
ATG4B-213ENST00000460211 CARD16Q5EG05 197 aa15.23■□□□□ 0.03
ATG4B-213ENST00000460211 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.23■□□□□ 0.03
ATG4B-213ENST00000460211 RFX8Q6ZV50 586 aa15.23■□□□□ 0.03
ATG4B-213ENST00000460211 PLPP6Q8IY26 295 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms