RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 LZTR1Q8N653 840 aa13.07□□□□□ -0.32
COL18A1-206ENST00000459895 PCDH20Q8N6Y1 951 aaKnown RBP13.07□□□□□ -0.32
COL18A1-206ENST00000459895 OR2A12Q8NGT7 310 aa13.07□□□□□ -0.32
COL18A1-206ENST00000459895 OR6K2Q8NGY2 324 aa13.07□□□□□ -0.32
COL18A1-206ENST00000459895 GRIN3AQ8TCU5 1115 aa13.07□□□□□ -0.32
COL18A1-206ENST00000459895 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.07□□□□□ -0.32
COL18A1-206ENST00000459895 LRRN4Q8WUT4 740 aa13.07□□□□□ -0.32
COL18A1-206ENST00000459895 EXOC2Q96KP1 924 aa13.07□□□□□ -0.32
COL18A1-206ENST00000459895 ALS2CR12Q96Q35 445 aa13.07□□□□□ -0.32
COL18A1-206ENST00000459895 FAM126AQ9BYI3 521 aaPredicted RBP13.07□□□□□ -0.32
COL18A1-206ENST00000459895 CEP44Q9C0F1 390 aa13.07□□□□□ -0.32
COL18A1-206ENST00000459895 RSPH9Q9H1X1 276 aaPredicted RBP13.07□□□□□ -0.32
COL18A1-206ENST00000459895 FBRSQ9HAH7 460 aa13.07□□□□□ -0.32
COL18A1-206ENST00000459895 PRDM16Q9HAZ2 1276 aa13.07□□□□□ -0.32
COL18A1-206ENST00000459895 DONSONQ9NYP3 566 aa13.07□□□□□ -0.32
COL18A1-206ENST00000459895 DTLQ9NZJ0 730 aa13.07□□□□□ -0.32
COL18A1-206ENST00000459895 AMFRQ9UKV5 643 aa13.07□□□□□ -0.32
COL18A1-206ENST00000459895 HPCAL4Q9UM19 191 aa13.07□□□□□ -0.32
COL18A1-206ENST00000459895 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.07□□□□□ -0.32
COL18A1-206ENST00000459895 PCDHGA2Q9Y5H1 932 aa13.07□□□□□ -0.32
COL18A1-206ENST00000459895 PCDHA3Q9Y5H8 950 aa13.07□□□□□ -0.32
COL18A1-206ENST00000459895 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.07□□□□□ -0.32
COL18A1-206ENST00000459895 CEP192Q8TEP8 1941 aa13.07□□□□□ -0.32
COL18A1-206ENST00000459895 CXorf51AA0A1B0GTR3 108 aa13.06□□□□□ -0.32
COL18A1-206ENST00000459895 MIF4GDA9UHW6 222 aaKnown RBP13.06□□□□□ -0.32
COL18A1-206ENST00000459895 RNF103O00237 685 aa13.06□□□□□ -0.32
COL18A1-206ENST00000459895 MAFKO60675 156 aa13.06□□□□□ -0.32
COL18A1-206ENST00000459895 LILRB5O75023 590 aa13.06□□□□□ -0.32
COL18A1-206ENST00000459895 PEX11BO96011 259 aa13.06□□□□□ -0.32
COL18A1-206ENST00000459895 CTSLP07711 333 aa13.06□□□□□ -0.32
COL18A1-206ENST00000459895 BCKDHBP21953 392 aa13.06□□□□□ -0.32
COL18A1-206ENST00000459895 GARSP41250 739 aaKnown RBP13.06□□□□□ -0.32
COL18A1-206ENST00000459895 PEX5P50542 639 aa13.06□□□□□ -0.32
COL18A1-206ENST00000459895 RWDD2BP57060 319 aa13.06□□□□□ -0.32
COL18A1-206ENST00000459895 RPS14P62263 151 aaKnown RBP13.06□□□□□ -0.32
COL18A1-206ENST00000459895 SLC10A2Q12908 348 aaPredicted RBP13.06□□□□□ -0.32
COL18A1-206ENST00000459895 ZNF211Q13398 564 aaPredicted RBP13.06□□□□□ -0.32
COL18A1-206ENST00000459895 PPP2R5EQ16537 467 aa13.06□□□□□ -0.32
COL18A1-206ENST00000459895 TFDP3Q5H9I0 405 aa13.06□□□□□ -0.32
COL18A1-206ENST00000459895 ATXN7L2Q5T6C5 722 aaPredicted RBP13.06□□□□□ -0.32
COL18A1-206ENST00000459895 KAZNQ674X7 775 aa13.06□□□□□ -0.32
COL18A1-206ENST00000459895 TMPRSS6Q8IU80 811 aa13.06□□□□□ -0.32
COL18A1-206ENST00000459895 REXO1L1PQ8IX06 675 aa13.06□□□□□ -0.32
COL18A1-206ENST00000459895 FAM160A2Q8N612 972 aaPredicted RBP13.06□□□□□ -0.32
COL18A1-206ENST00000459895 FRMD1Q8N878 549 aa13.06□□□□□ -0.32
COL18A1-206ENST00000459895 CHST14Q8NCH0 376 aa13.06□□□□□ -0.32
COL18A1-206ENST00000459895 RLN3Q8WXF3 142 aa13.06□□□□□ -0.32
COL18A1-206ENST00000459895 HAUS1Q96CS2 278 aa13.06□□□□□ -0.32
COL18A1-206ENST00000459895 HES6Q96HZ4 224 aa13.06□□□□□ -0.32
COL18A1-206ENST00000459895 OLFM3Q96PB7 478 aa13.06□□□□□ -0.32
COL18A1-206ENST00000459895 USP36Q9P275 1121 aaKnown RBP13.06□□□□□ -0.32
COL18A1-206ENST00000459895 SERGEFQ9UGK8 458 aa13.06□□□□□ -0.32
COL18A1-206ENST00000459895 SUN2Q9UH99 717 aa13.06□□□□□ -0.32
COL18A1-206ENST00000459895 IPO11Q9UI26 975 aaKnown RBP13.06□□□□□ -0.32
COL18A1-206ENST00000459895 CYP8B1Q9UNU6 501 aa13.06□□□□□ -0.32
COL18A1-206ENST00000459895 TP53BP1Q12888 1972 aaPredicted RBP13.05□□□□□ -0.32
COL18A1-206ENST00000459895 CCDC163A0A0D9SF12 145 aa13.05□□□□□ -0.32
COL18A1-206ENST00000459895 TARSL2A2RTX5 802 aaKnown RBP13.05□□□□□ -0.32
COL18A1-206ENST00000459895 MUSKO15146 869 aa13.05□□□□□ -0.32
COL18A1-206ENST00000459895 ALOX15BO15296 676 aa13.05□□□□□ -0.32
COL18A1-206ENST00000459895 MID1O15344 667 aa13.05□□□□□ -0.32
COL18A1-206ENST00000459895 GJB3O75712 270 aa13.05□□□□□ -0.32
COL18A1-206ENST00000459895 RPP40O75818 363 aaKnown RBP13.05□□□□□ -0.32
COL18A1-206ENST00000459895 GSRP00390 522 aa13.05□□□□□ -0.32
COL18A1-206ENST00000459895 PTPN7P35236 360 aa13.05□□□□□ -0.32
COL18A1-206ENST00000459895 RGRP47804 291 aa13.05□□□□□ -0.32
COL18A1-206ENST00000459895 CCNHP51946 323 aaPredicted RBP13.05□□□□□ -0.32
COL18A1-206ENST00000459895 NRLP54845 237 aa13.05□□□□□ -0.32
COL18A1-206ENST00000459895 RHOAP61586 193 aa13.05□□□□□ -0.32
COL18A1-206ENST00000459895 IL10RBQ08334 325 aa13.05□□□□□ -0.32
COL18A1-206ENST00000459895 CST6Q15828 149 aa13.05□□□□□ -0.32
COL18A1-206ENST00000459895 MAP7D1Q3KQU3 841 aa13.05□□□□□ -0.32
COL18A1-206ENST00000459895 POM121L1PQ3SYA9 428 aa13.05□□□□□ -0.32
COL18A1-206ENST00000459895 TMCO4Q5TGY1 634 aa13.05□□□□□ -0.32
COL18A1-206ENST00000459895 ZC3H14Q6PJT7 736 aaKnown RBP13.05□□□□□ -0.32
COL18A1-206ENST00000459895 DPY19L3Q6ZPD9 716 aa13.05□□□□□ -0.32
COL18A1-206ENST00000459895 MMAAQ8IVH4 418 aaKnown RBP13.05□□□□□ -0.32
COL18A1-206ENST00000459895 UBL4BQ8N7F7 174 aa13.05□□□□□ -0.32
COL18A1-206ENST00000459895 GAB3Q8WWW8 586 aa13.05□□□□□ -0.32
COL18A1-206ENST00000459895 OR8D1Q8WZ84 308 aa13.05□□□□□ -0.32
COL18A1-206ENST00000459895 PRCCQ92733 491 aaPredicted RBP13.05□□□□□ -0.32
COL18A1-206ENST00000459895 VOPP1Q96AW1 172 aa13.05□□□□□ -0.32
COL18A1-206ENST00000459895 HDAC11Q96DB2 347 aa13.05□□□□□ -0.32
COL18A1-206ENST00000459895 SIPA1Q96FS4 1042 aa13.05□□□□□ -0.32
COL18A1-206ENST00000459895 PABPC3Q9H361 631 aaKnown RBP13.05□□□□□ -0.32
COL18A1-206ENST00000459895 ZDHHC6Q9H6R6 413 aa13.05□□□□□ -0.32
COL18A1-206ENST00000459895 TRMT1Q9NXH9 659 aaKnown RBP13.05□□□□□ -0.32
COL18A1-206ENST00000459895 SARDHQ9UL12 918 aa13.05□□□□□ -0.32
COL18A1-206ENST00000459895 INVSQ9Y283 1065 aa13.05□□□□□ -0.32
COL18A1-206ENST00000459895 HEY1Q9Y5J3 304 aa13.05□□□□□ -0.32
COL18A1-206ENST00000459895 WASF2Q9Y6W5 498 aa13.05□□□□□ -0.32
COL18A1-206ENST00000459895 PLXNA2O75051 1894 aa13.05□□□□□ -0.32
COL18A1-206ENST00000459895 IGHV1OR15-9A0A0B4J2B8 117 aa13.04□□□□□ -0.32
COL18A1-206ENST00000459895 CST8O60676 142 aa13.04□□□□□ -0.32
COL18A1-206ENST00000459895 ZRANB2O95218 330 aaKnown RBP eCLIP13.04□□□□□ -0.32
COL18A1-206ENST00000459895 C7P10643 843 aa13.04□□□□□ -0.32
COL18A1-206ENST00000459895 PYGMP11217 842 aa13.04□□□□□ -0.32
COL18A1-206ENST00000459895 TGM2P21980 687 aa13.04□□□□□ -0.32
COL18A1-206ENST00000459895 GKP32189 559 aa13.04□□□□□ -0.32
COL18A1-206ENST00000459895 P2RY2P41231 377 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms