RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 SPAG4Q9NPE6 437 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 KLHL11Q9NVR0 708 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 TRNAU1APQ9NX07 287 aaKnown RBP9.9□□□□□ -0.82
UFD1-205ENST00000459854 MTF2Q9Y483 593 aaPredicted RBP9.9□□□□□ -0.82
UFD1-205ENST00000459854 TELO2Q9Y4R8 837 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 V9GYQ6 96 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 CLDN25C9JDP6 229 aa9.9□□□□□ -0.83
UFD1-205ENST00000459854 PDLIM1O00151 329 aa9.9□□□□□ -0.83
UFD1-205ENST00000459854 NOS1APO75052 506 aaPredicted RBP9.9□□□□□ -0.83
UFD1-205ENST00000459854 PLEKP08567 350 aaPredicted RBP9.9□□□□□ -0.83
UFD1-205ENST00000459854 COX4I1P13073 169 aa9.9□□□□□ -0.83
UFD1-205ENST00000459854 ICAM3P32942 547 aa9.9□□□□□ -0.83
UFD1-205ENST00000459854 STARP49675 285 aa9.9□□□□□ -0.83
UFD1-205ENST00000459854 ACAP1Q15027 740 aa9.9□□□□□ -0.83
UFD1-205ENST00000459854 ZNF484Q5JVG2 852 aa9.9□□□□□ -0.83
UFD1-205ENST00000459854 PERM1Q5SV97 790 aa9.9□□□□□ -0.83
UFD1-205ENST00000459854 MFSD5Q6N075 450 aa9.9□□□□□ -0.83
UFD1-205ENST00000459854 OTOAQ7RTW8 1153 aa9.9□□□□□ -0.83
UFD1-205ENST00000459854 FAM228AQ86W67 206 aa9.9□□□□□ -0.83
UFD1-205ENST00000459854 BLOC1S5Q8TDH9 187 aa9.9□□□□□ -0.83
UFD1-205ENST00000459854 RTKNQ9BST9 563 aa9.9□□□□□ -0.83
UFD1-205ENST00000459854 FAM49AQ9H0Q0 323 aaPredicted RBP9.9□□□□□ -0.83
UFD1-205ENST00000459854 S100A14Q9HCY8 104 aa9.9□□□□□ -0.83
UFD1-205ENST00000459854 ANKEF1Q9NU02 776 aa9.9□□□□□ -0.83
UFD1-205ENST00000459854 WBP1LQ9NX94 342 aa9.9□□□□□ -0.83
UFD1-205ENST00000459854 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.9□□□□□ -0.83
UFD1-205ENST00000459854 ZMYM2Q9UBW7 1377 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 A0A087X1B8 175 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 RPL22P35268 128 aaKnown RBP9.89□□□□□ -0.83
UFD1-205ENST00000459854 NPY2RP49146 381 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 RPL10AP62906 217 aaKnown RBP9.89□□□□□ -0.83
UFD1-205ENST00000459854 TYW3Q6IPR3 259 aaKnown RBP9.89□□□□□ -0.83
UFD1-205ENST00000459854 OTOP1Q7RTM1 612 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 PROSER1Q86XN7 944 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 ZNF276Q8N554 614 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 DEFB118Q96PH6 123 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 DHX33Q9H6R0 707 aaKnown RBP9.89□□□□□ -0.83
UFD1-205ENST00000459854 DDX60LQ5H9U9 1706 aaKnown RBP9.89□□□□□ -0.83
UFD1-205ENST00000459854 DOCK1Q14185 1865 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 C17orf102A2RUQ5 167 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 KLHL18O94889 574 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 HLA-DRAP01903 254 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 PCSK2P16519 638 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 NME5P56597 212 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 MRPS22P82650 360 aaKnown RBP9.89□□□□□ -0.83
UFD1-205ENST00000459854 PRKCEQ02156 737 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 SYTL3Q4VX76 610 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 PTRHD1Q6GMV3 140 aaKnown RBP9.89□□□□□ -0.83
UFD1-205ENST00000459854 NT5DC3Q86UY8 548 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 EMC1Q8N766 993 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 DRAXINQ8NBI3 349 aaPredicted RBP9.89□□□□□ -0.83
UFD1-205ENST00000459854 IL31RAQ8NI17 732 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 DNAAF2Q9NVR5 837 aaKnown RBP9.89□□□□□ -0.83
UFD1-205ENST00000459854 PTCH2Q9Y6C5 1203 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 DUSP10Q9Y6W6 482 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 BBIP1A8MTZ0 92 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 H3BRB1 525 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 TRAFD1O14545 582 aaPredicted RBP9.89□□□□□ -0.83
UFD1-205ENST00000459854 AXIN1O15169 862 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 ENTPD5O75356 428 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 ASMTLO95671 621 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 ITGAXP20702 1163 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 CLK2P49760 499 aaKnown RBP9.89□□□□□ -0.83
UFD1-205ENST00000459854 FOXR2Q6PJQ5 311 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 EPHX4Q8IUS5 362 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 TMEM132CQ8N3T6 1108 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 MOSPD2Q8NHP6 518 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 TEKT5Q96M29 485 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 RNF145Q96MT1 663 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 FAM118BQ9BPY3 351 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 ADAM33Q9BZ11 813 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.89□□□□□ -0.837e-7■■■■■ 41.3
UFD1-205ENST00000459854 TUT1Q9H6E5 874 aaKnown RBP9.89□□□□□ -0.83
UFD1-205ENST00000459854 RPS6KA6Q9UK32 745 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 HACD1B0YJ81 288 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 GSSP48637 474 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 ZNF135P52742 658 aaPredicted RBP9.89□□□□□ -0.83
UFD1-205ENST00000459854 TAF5Q15542 800 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 PLA2G4FQ68DD2 849 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.89□□□□□ -0.83
UFD1-205ENST00000459854 NT5C1AQ9BXI3 368 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 SEZ6LQ9BYH1 1024 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 NMRAL1Q9HBL8 299 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 COL20A1Q9P218 1284 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 NUDT5Q9UKK9 219 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 Q9Y3F1 56 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 PCDHGA10Q9Y5H3 936 aa9.89□□□□□ -0.83
UFD1-205ENST00000459854 FAM237AA0A1B0GTK4 181 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 EDF1O60869 148 aaKnown RBP9.88□□□□□ -0.83
UFD1-205ENST00000459854 ZNF682O95780 498 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 SERPINA1P01009 418 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 CD44P16070 742 aaKnown RBP9.88□□□□□ -0.83
UFD1-205ENST00000459854 PIK3CGP48736 1102 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 NR2C2P49116 596 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 STX4Q12846 297 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 MORN1Q5T089 497 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 GPR107Q5VW38 600 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 AHI1Q8N157 1196 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 LRRN4CLQ8ND94 238 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 TMIEQ8NEW7 156 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms