RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 PAPSS2O95340 614 aaPredicted RBP8.98□□□□□ -0.97
HDAC3-202ENST00000459727 IGLV3-25P01717 112 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 PRKCGP05129 697 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 FYNP06241 537 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 FESP07332 822 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 PDHA1P08559 390 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 RBP1P09455 135 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 USP17L7P0C7H9 530 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 ZNF865P0CJ78 1059 aaPredicted RBP8.98□□□□□ -0.97
HDAC3-202ENST00000459727 TYMPP19971 482 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 SP100P23497 879 aaPredicted RBP8.98□□□□□ -0.97
HDAC3-202ENST00000459727 CD151P48509 253 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 CLCN5P51795 746 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 RAB10P61026 200 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 PURAQ00577 322 aaKnown RBP8.98□□□□□ -0.97
HDAC3-202ENST00000459727 GALNT1Q10472 559 aaPredicted RBP8.98□□□□□ -0.97
HDAC3-202ENST00000459727 CUL3Q13618 768 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 CYLC2Q14093 348 aaPredicted RBP8.98□□□□□ -0.97
HDAC3-202ENST00000459727 FAM83EQ2M2I3 478 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 CES4AQ5XG92 561 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 FAM171BQ6P995 826 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 IZUMO2Q6UXV1 221 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 DLK2Q6UY11 383 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 MFN1Q8IWA4 741 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 PGAM4Q8N0Y7 254 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 NPWQ8N729 165 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 KYQ8NBH2 561 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 STYXQ8WUJ0 223 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 TOP1MTQ969P6 601 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 MYLPFQ96A32 169 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 SCYL1Q96KG9 808 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 SERPINB11Q96P15 392 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 GBP5Q96PP8 586 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 ASB2Q96Q27 587 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 TSC22D3Q99576 134 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 MRPL57Q9BQC6 102 aaKnown RBP8.98□□□□□ -0.97
HDAC3-202ENST00000459727 MLPHQ9BV36 600 aaPredicted RBP8.98□□□□□ -0.97
HDAC3-202ENST00000459727 RETREG1Q9H6L5 497 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 GOLGA2P5Q9HBQ8 144 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 GLOD4Q9HC38 313 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 IARS2Q9NSE4 1012 aaKnown RBP8.98□□□□□ -0.97
HDAC3-202ENST00000459727 PNPOQ9NVS9 261 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 UTP6Q9NYH9 597 aaKnown RBP8.98□□□□□ -0.97
HDAC3-202ENST00000459727 SLC39A10Q9ULF5 831 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 TCAF1Q9Y4C2 921 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 SCN1AP35498 2009 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 CCDC189A1A4V9 331 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 DYTNA2CJ06 578 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 MANSC4A6NHS7 340 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-202ENST00000459727 DCXO43602 365 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 HCRTO43612 131 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 BEST1O76090 585 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 STAMBPO95630 424 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 BAG2O95816 211 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 JCHAINP01591 159 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 PIM1P11309 404 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-202ENST00000459727 ITGAXP20702 1163 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 ATP5F1P24539 256 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-202ENST00000459727 CD68P34810 354 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-202ENST00000459727 GRIA4P48058 902 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 NDUFV1P49821 464 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 RENBPP51606 427 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 NDST2P52849 883 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 CDC16Q13042 620 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 ZBTB17Q13105 803 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 MED21Q13503 144 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 PPM1JQ5JR12 505 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 AGAP9Q5VTM2 703 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 BTBD8Q5XKL5 378 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 LRRC8EQ6NSJ5 796 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 BNC2Q6ZN30 1099 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-202ENST00000459727 HFE2Q6ZVN8 426 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 MAVSQ7Z434 540 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 CMC1Q7Z7K0 106 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 TAC4Q86UU9 113 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 DEFB107AQ8IZN7 70 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 ZNF781Q8N8C0 355 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 ZMIZ2Q8NF64 920 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 SLC26A7Q8TE54 656 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 DQX1Q8TE96 717 aaKnown RBP8.97□□□□□ -0.97
HDAC3-202ENST00000459727 ZFAND2BQ8WV99 257 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 NRG4Q8WWG1 115 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 DPF3Q92784 378 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 GATA6Q92908 595 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 MFSD3Q96ES6 412 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 C1orf74Q96LT6 269 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 TTC1Q99614 292 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 LPIN3Q9BQK8 851 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 GORASP1Q9BQQ3 440 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 TRIM56Q9BRZ2 755 aaKnown RBP8.97□□□□□ -0.97
HDAC3-202ENST00000459727 GATA5Q9BWX5 397 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-202ENST00000459727 CEP41Q9BYV8 373 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 CXCL16Q9H2A7 254 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 RNF39Q9H2S5 420 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 EFCAB1Q9HAE3 211 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 ARNT2Q9HBZ2 717 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 DLGAP2Q9P1A6 1054 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 GJD2Q9UKL4 321 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 PSMD13Q9UNM6 376 aa8.97□□□□□ -0.97
HDAC3-202ENST00000459727 POMPQ9Y244 141 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms