RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 PDCD7Q8N8D1 485 aaKnown RBP5.94□□□□□ -1.46
RNU1-88P-201ENST00000459274 DCAF4L2Q8NA75 395 aa5.94□□□□□ -1.46
RNU1-88P-201ENST00000459274 IPMKQ8NFU5 416 aa5.94□□□□□ -1.46
RNU1-88P-201ENST00000459274 SPDYE1Q8NFV5 336 aaPredicted RBP5.94□□□□□ -1.46
RNU1-88P-201ENST00000459274 CALML6Q8TD86 181 aa5.94□□□□□ -1.46
RNU1-88P-201ENST00000459274 AENQ8WTP8 325 aaKnown RBP5.94□□□□□ -1.46
RNU1-88P-201ENST00000459274 OSCP1Q8WVF1 389 aa5.94□□□□□ -1.46
RNU1-88P-201ENST00000459274 FGF13Q92913 245 aa5.94□□□□□ -1.46
RNU1-88P-201ENST00000459274 ARHGEF2Q92974 986 aaKnown RBP5.94□□□□□ -1.46
RNU1-88P-201ENST00000459274 TCEAL4Q96EI5 215 aa5.94□□□□□ -1.46
RNU1-88P-201ENST00000459274 STAMBPL1Q96FJ0 436 aa5.94□□□□□ -1.46
RNU1-88P-201ENST00000459274 HMCESQ96FZ2 354 aa5.94□□□□□ -1.46
RNU1-88P-201ENST00000459274 TSNARE1Q96NA8 513 aa5.94□□□□□ -1.46
RNU1-88P-201ENST00000459274 FCRL5Q96RD9 977 aa5.94□□□□□ -1.46
RNU1-88P-201ENST00000459274 PRMT1Q99873 361 aaKnown RBP5.94□□□□□ -1.46
RNU1-88P-201ENST00000459274 TBL1YQ9BQ87 522 aa5.94□□□□□ -1.46
RNU1-88P-201ENST00000459274 FEM1AQ9BSK4 669 aa5.94□□□□□ -1.46
RNU1-88P-201ENST00000459274 LRRC3Q9BY71 257 aa5.94□□□□□ -1.46
RNU1-88P-201ENST00000459274 ADAM33Q9BZ11 813 aa5.94□□□□□ -1.46
RNU1-88P-201ENST00000459274 IL22Q9GZX6 179 aa5.94□□□□□ -1.46
RNU1-88P-201ENST00000459274 SLC25A51Q9H1U9 297 aa5.94□□□□□ -1.46
RNU1-88P-201ENST00000459274 BRD9Q9H8M2 597 aa5.94□□□□□ -1.46
RNU1-88P-201ENST00000459274 USP29Q9HBJ7 922 aa5.94□□□□□ -1.46
RNU1-88P-201ENST00000459274 GLOD4Q9HC38 313 aa5.94□□□□□ -1.46
RNU1-88P-201ENST00000459274 NSMCE4AQ9NXX6 385 aa5.94□□□□□ -1.46
RNU1-88P-201ENST00000459274 DEC1Q9P2X7 70 aa5.94□□□□□ -1.46
RNU1-88P-201ENST00000459274 ZC3H7BQ9UGR2 993 aaKnown RBP5.94□□□□□ -1.46
RNU1-88P-201ENST00000459274 CD207Q9UJ71 328 aa5.94□□□□□ -1.46
RNU1-88P-201ENST00000459274 PLAAQ9Y263 795 aa5.94□□□□□ -1.46
RNU1-88P-201ENST00000459274 SNX10Q9Y5X0 201 aa5.94□□□□□ -1.46
RNU1-88P-201ENST00000459274 NYNRINQ9P2P1 1898 aaKnown RBP5.94□□□□□ -1.46
RNU1-88P-201ENST00000459274 IQANK1A0A1B0GTG1 560 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 HEATR9A2RTY3 570 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 TBC1D3BA6NDS4 549 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 C2orf81A6NN90 581 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 HEPACAM2A8MVW5 462 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 F8W8V4 182 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 RFXAPO00287 272 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 BNIP3LO60238 219 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 RNASEH1O60930 286 aaKnown RBP5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 PMPCBO75439 489 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 CNTN5O94779 1100 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 ACSL3O95573 720 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 POP4O95707 220 aaKnown RBP5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 AP2A1O95782 977 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 KLKB1P03952 638 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 APODP05090 189 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 INHBAP08476 426 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 PABPC1P11940 636 aaKnown RBP5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 CEBPBP17676 345 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 KRT15P19012 456 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 NFKB1P19838 968 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 HLA-DPA1P20036 260 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 PSMB4P28070 264 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 SERPINA4P29622 427 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 MSH2P43246 934 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 SESN2P58004 480 aaPredicted RBP5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 AP1S1P61966 158 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 NTHL1P78549 312 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 ECT2LQ008S8 904 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 BCL2L1Q07817 233 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 NSUN2Q08J23 767 aaKnown RBP eCLIP5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 HYAL1Q12794 435 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 THOC5Q13769 683 aaKnown RBP5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 SEPT6Q14141 434 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 UAP1Q16222 522 aaPredicted RBP5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 KYNUQ16719 465 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 AAK1Q2M2I8 961 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 PRSS36Q5K4E3 855 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 LY6G5CQ5SRR4 150 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 STXBP5Q5T5C0 1151 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 NADSYN1Q6IA69 706 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 GRAMD4Q6IC98 578 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 Q6ZNB5 142 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 B4GALNT4Q76KP1 1039 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 ANKS1BQ7Z6G8 1248 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 DSG4Q86SJ6 1040 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 CIR1Q86X95 450 aaPredicted RBP5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 MFSD6LQ8IWD5 586 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 SUGP1Q8IWZ8 645 aaKnown RBP5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 CTAGE3PQ8IX95 158 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 ADGRG2Q8IZP9 1017 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 RIBC1Q8N443 379 aaPredicted RBP5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 OTUD6BQ8N6M0 293 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 NPWQ8N729 165 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 PDCD6IPQ8WUM4 868 aaKnown RBP5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 PTCD2Q8WV60 388 aaKnown RBP5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 CPT1BQ92523 772 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 PRCCQ92733 491 aaPredicted RBP5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 NXPE3Q969Y0 559 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 ELSPBP1Q96BH3 223 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 CFAP36Q96G28 342 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 ASB16Q96NS5 453 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 SLC22A12Q96S37 553 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 CYTH2Q99418 400 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 IL12RB2Q99665 862 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 SEMA3CQ99985 751 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 HERPUD2Q9BSE4 406 aa5.93□□□□□ -1.46
RNU1-88P-201ENST00000459274 CIPCQ9C0C6 399 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms