RNA–Protein interactions for RNA: ENST00000456983.1

COL21A1-204, Transcript of collagen type XXI alpha 1 chain, human

TSL 3

Gene COL21A1, Length 480 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COL21A1-204	ENST00000456983	NFE2	Q16621	373 aa	Predicted RBP	4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	DDR2	Q16832	855 aa		4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	SKIDA1	Q1XH10	827 aa		4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	FIGN	Q5HY92	759 aa		4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	PPM1L	Q5SGD2	360 aa		4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	RARS2	Q5T160	578 aa	Known RBP	4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	NAA35	Q5VZE5	725 aa		4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	DENND1B	Q6P3S1	775 aa		4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	GPRIN1	Q7Z2K8	1008 aa		4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	GPR155	Q7Z3F1	870 aa		4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	TTC30A	Q86WT1	665 aa		4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	KREMEN2	Q8NCW0	462 aa		4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	VN1R2	Q8NFZ6	395 aa		4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	UBA3	Q8TBC4	463 aa		4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	MYCBPAP	Q8TBZ2	947 aa		4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	SPPL2B	Q8TCT7	592 aa		4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	GIPC2	Q8TF65	315 aa		4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	SLC22A17	Q8WUG5	538 aa		4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	SECISBP2L	Q93073	1101 aa	Known RBP	4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	IQCD	Q96DY2	449 aa		4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	CYFIP2	Q96F07	1278 aa		4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	CDX2	Q99626	313 aa	Predicted RBP	4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	PKMYT1	Q99640	499 aa		4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	ZSWIM1	Q9BR11	485 aa		4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	B3GNT5	Q9BYG0	378 aa		4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	NELFA	Q9H3P2	528 aa		4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	SYNC	Q9H7C4	482 aa		4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	SFXN1	Q9H9B4	322 aa		4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	SLC6A20	Q9NP91	592 aa		4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	ST7	Q9NRC1	585 aa		4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	TMEM30A	Q9NV96	361 aa		4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	ZNHIT6	Q9NWK9	470 aa	Known RBP	4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	FNIP2	Q9P278	1114 aa		4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	AFF4	Q9UHB7	1163 aa	Known RBP	4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	CDH22	Q9UJ99	828 aa		4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	NOCT	Q9UK39	431 aa	Known RBP	4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	CAPN11	Q9UMQ6	739 aa		4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	MAGED2	Q9UNF1	606 aa	Predicted RBP	4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	MTCH2	Q9Y6C9	303 aa		4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	XIRP2	A4UGR9	3374 aa		4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	C5orf42	Q9H799	3197 aa		4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	DOCK6	Q96HP0	2047 aa		4.9	□□□□□ -1.63
COL21A1-204	ENST00000456983	DENND4C	Q5VZ89	1909 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	TULP2	O00295	520 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	BEST1	O76090	585 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	SERPING1	P05155	500 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	CCDC172	P0C7W6	258 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	SETSIP	P0DME0	302 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	HAPLN1	P10915	354 aa	Predicted RBP	4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	LCP1	P13796	627 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	SP100	P23497	879 aa	Predicted RBP	4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	ALDH1A3	P47895	512 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	SLC8A3	P57103	927 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	BPIFB4	P59827	614 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	DGCR2	P98153	550 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	FMO1	Q01740	532 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	CDR2	Q01850	454 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	TBX2	Q13207	712 aa	Predicted RBP	4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	GPR17	Q13304	367 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	PDCL	Q13371	301 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	RAB33A	Q14088	237 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	TESK1	Q15569	626 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	TAF12	Q16514	161 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	CFAP221	Q4G0U5	840 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	PTPN20	Q4JDL3	420 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	C2CD6	Q53TS8	623 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	CYP4A22	Q5TCH4	519 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	TPGS2	Q68CL5	300 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	ARHGAP17	Q68EM7	881 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	FAM171B	Q6P995	826 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	CCDC81	Q6ZN84	652 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	MMS22L	Q6ZRQ5	1243 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	CLEC20A	Q6ZU45	233 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	CCDC149	Q6ZUS6	474 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	CCDC186	Q7Z3E2	898 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	ZNF571	Q7Z3V5	609 aa	Predicted RBP	4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	VPS36	Q86VN1	386 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	DNAAF5	Q86Y56	855 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	FMNL3	Q8IVF7	1028 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	ULK2	Q8IYT8	1036 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	SIX6OS1	Q8N1H7	587 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	C12orf76	Q8N812	135 aa	Predicted RBP	4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	TC2N	Q8N9U0	490 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	OR8K1	Q8NGG5	319 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	IPO4	Q8TEX9	1081 aa	Known RBP	4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	C2orf15	Q8WU43	125 aa	Known RBP	4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	ING5	Q8WYH8	240 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	CASP10	Q92851	521 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	FUBP3	Q96I24	572 aa	Known RBP eCLIP	4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	GCNA	Q96QF7	691 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	KCNK16	Q96T55	309 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	DNAJC7	Q99615	494 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	CDCA3	Q99618	268 aa	Predicted RBP	4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	HNRNPAB	Q99729	332 aa	Known RBP	4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	SMO	Q99835	787 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	C11orf70	Q9BRQ4	267 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	FAM124B	Q9H5Z6	455 aa	Predicted RBP	4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	HAUS4	Q9H6D7	363 aa		4.89	□□□□□ -1.63
COL21A1-204	ENST00000456983	SPTLC3	Q9NUV7	552 aa		4.89	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms