RNA–Protein interactions for RNA: ENST00000455841.6

GTF2IRD1-203, Transcript of GTF2I repeat domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2IRD1, Length 3,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1-203ENST00000455841 TK2O00142 265 aa15.5■□□□□ 0.07
GTF2IRD1-203ENST00000455841 CSF2RAP15509 400 aa15.5■□□□□ 0.07
GTF2IRD1-203ENST00000455841 ATF6P18850 670 aa15.5■□□□□ 0.07
GTF2IRD1-203ENST00000455841 CDK16Q00536 496 aa15.5■□□□□ 0.07
GTF2IRD1-203ENST00000455841 PTPRRQ15256 657 aa15.5■□□□□ 0.07
GTF2IRD1-203ENST00000455841 VPS39Q96JC1 886 aa15.5■□□□□ 0.07
GTF2IRD1-203ENST00000455841 TRIM62Q9BVG3 475 aa15.5■□□□□ 0.07
GTF2IRD1-203ENST00000455841 KDM4CQ9H3R0 1056 aa15.5■□□□□ 0.07
GTF2IRD1-203ENST00000455841 PPCSQ9HAB8 311 aa15.5■□□□□ 0.07
GTF2IRD1-203ENST00000455841 MOCS1Q9NZB8 636 aa15.5■□□□□ 0.07
GTF2IRD1-203ENST00000455841 GOLGA8QA0A0J9YX86 632 aa15.5■□□□□ 0.07
GTF2IRD1-203ENST00000455841 GOLGA8OA6NCC3 632 aa15.5■□□□□ 0.07
GTF2IRD1-203ENST00000455841 SLC38A8A6NNN8 435 aa15.5■□□□□ 0.07
GTF2IRD1-203ENST00000455841 F5H5T6 163 aa15.5■□□□□ 0.07
GTF2IRD1-203ENST00000455841 GOLGA8NF8WBI6 632 aa15.5■□□□□ 0.07
GTF2IRD1-203ENST00000455841 KRT16P08779 473 aa15.5■□□□□ 0.07
GTF2IRD1-203ENST00000455841 SPRP35270 261 aaPredicted RBP15.5■□□□□ 0.07
GTF2IRD1-203ENST00000455841 NEK3P51956 506 aa15.5■□□□□ 0.07
GTF2IRD1-203ENST00000455841 CFAP157Q5JU67 520 aa15.5■□□□□ 0.07
GTF2IRD1-203ENST00000455841 CRLF3Q8IUI8 442 aa15.5■□□□□ 0.07
GTF2IRD1-203ENST00000455841 EBF4Q9BQW3 602 aa15.5■□□□□ 0.07
GTF2IRD1-203ENST00000455841 OXCT2Q9BYC2 517 aaPredicted RBP15.5■□□□□ 0.07
GTF2IRD1-203ENST00000455841 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.5■□□□□ 0.07
GTF2IRD1-203ENST00000455841 TRHDEQ9UKU6 1024 aa15.5■□□□□ 0.07
GTF2IRD1-203ENST00000455841 SCML2Q9UQR0 700 aa15.5■□□□□ 0.07
GTF2IRD1-203ENST00000455841 C2orf78A6NCI8 922 aa15.49■□□□□ 0.07
GTF2IRD1-203ENST00000455841 SRRM3A6NNA2 597 aaPredicted RBP15.49■□□□□ 0.07
GTF2IRD1-203ENST00000455841 VGLL3A8MV65 326 aa15.49■□□□□ 0.07
GTF2IRD1-203ENST00000455841 MTSS1O43312 755 aa15.49■□□□□ 0.07
GTF2IRD1-203ENST00000455841 NCF2P19878 526 aaPredicted RBP15.49■□□□□ 0.07
GTF2IRD1-203ENST00000455841 SERPINB9P50453 376 aa15.49■□□□□ 0.07
GTF2IRD1-203ENST00000455841 PRAMEP78395 509 aa15.49■□□□□ 0.07
GTF2IRD1-203ENST00000455841 USP4Q13107 963 aa15.49■□□□□ 0.07
GTF2IRD1-203ENST00000455841 PPHLN1Q8NEY8 458 aaKnown RBP15.49■□□□□ 0.07
GTF2IRD1-203ENST00000455841 KCTD4Q8WVF5 259 aa15.49■□□□□ 0.07
GTF2IRD1-203ENST00000455841 ERLEC1Q96DZ1 483 aa15.49■□□□□ 0.07
GTF2IRD1-203ENST00000455841 IFT43Q96FT9 208 aa15.49■□□□□ 0.07
GTF2IRD1-203ENST00000455841 ZBED2Q9BTP6 218 aa15.49■□□□□ 0.07
GTF2IRD1-203ENST00000455841 MUC3BQ9H195 1237 aa15.49■□□□□ 0.07
GTF2IRD1-203ENST00000455841 RXFP1Q9HBX9 757 aa15.49■□□□□ 0.07
GTF2IRD1-203ENST00000455841 C1QAP02745 245 aa15.49■□□□□ 0.07
GTF2IRD1-203ENST00000455841 MAGEA3P43357 314 aa15.49■□□□□ 0.07
GTF2IRD1-203ENST00000455841 SESN3P58005 492 aa15.49■□□□□ 0.07
GTF2IRD1-203ENST00000455841 SEMG2Q02383 582 aa15.49■□□□□ 0.07
GTF2IRD1-203ENST00000455841 IKBKEQ14164 716 aa15.49■□□□□ 0.07
GTF2IRD1-203ENST00000455841 FBXO48Q5FWF7 155 aa15.49■□□□□ 0.07
GTF2IRD1-203ENST00000455841 RPS27LQ71UM5 84 aaKnown RBP15.49■□□□□ 0.07
GTF2IRD1-203ENST00000455841 PGAP3Q96FM1 320 aaPredicted RBP15.49■□□□□ 0.07
GTF2IRD1-203ENST00000455841 PAWRQ96IZ0 340 aaKnown RBP15.49■□□□□ 0.07
GTF2IRD1-203ENST00000455841 HHIPL1Q96JK4 782 aa15.49■□□□□ 0.07
GTF2IRD1-203ENST00000455841 YME1L1Q96TA2 773 aa15.49■□□□□ 0.07
GTF2IRD1-203ENST00000455841 OSBPL2Q9H1P3 480 aa15.49■□□□□ 0.07
GTF2IRD1-203ENST00000455841 L3MBTL1Q9Y468 752 aa15.49■□□□□ 0.07
GTF2IRD1-203ENST00000455841 EIF4E1BA6NMX2 242 aaKnown RBP15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 SYN3O14994 580 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 FSBPO95073 299 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 SEC24AO95486 1093 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 MT-CO1P00395 513 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 C2P06681 752 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 ATP5C1P36542 298 aaKnown RBP15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 ALDH1A3P47895 512 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 HARS2P49590 506 aaKnown RBP15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 CES4AQ5XG92 561 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 ANKS3Q6ZW76 656 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 POU5F2Q8N7G0 328 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 KCNV2Q8TDN2 545 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 HAPLN3Q96S86 360 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 PNPOQ9NVS9 261 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 ARHGEF38Q9NXL2 777 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 TLR6Q9Y2C9 796 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 AAR2Q9Y312 384 aaKnown RBP15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 STARD13Q9Y3M8 1113 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 ZFP37Q9Y6Q3 630 aaPredicted RBP15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 NUMBLQ9Y6R0 609 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 CHD7Q9P2D1 2997 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 ZNF487B1APH4 448 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 MATN3O15232 486 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 ANXA9O76027 345 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 HAUS5O94927 633 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 MBL2P11226 248 aaPredicted RBP15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 TSPAN8P19075 237 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 AIF1P55008 147 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 GPR17Q13304 367 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 USP41Q3LFD5 358 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 BNIPLQ7Z465 357 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 TSEN34Q9BSV6 310 aaKnown RBP15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 MTF2Q9Y483 593 aaPredicted RBP15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 KNL1Q8NG31 2342 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 LOC100653049A0A140TA62 436 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 UBA6A0AVT1 1052 aaPredicted RBP15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 KRT34O76011 436 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 HSPA4LO95757 839 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 FAM163BP0C2L3 166 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 ETV4P43268 484 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 FAM189BP81408 668 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 SPANXN3Q5MJ09 141 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 NXNQ6DKJ4 435 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 TPGS1Q6ZTW0 290 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 LRRC43Q8N309 656 aa15.48■□□□□ 0.07
GTF2IRD1-203ENST00000455841 CARNMT1Q8N4J0 409 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms