RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 MAN1B1Q9UKM7 699 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 SARDHQ9UL12 918 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 VANGL2Q9ULK5 521 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 STAP1Q9ULZ2 295 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 PCDHGC3Q9UN70 934 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 OR51B4Q9Y5P0 310 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 GCN1Q92616 2671 aaKnown RBP8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 LAMA5O15230 3695 aa8.22□□□□□ -1.09
NIF3L1-209ENST00000454952 DOCK4Q8N1I0 1966 aa8.21□□□□□ -1.09
NIF3L1-209ENST00000454952 SYNJ2BP-COX16A0A087WUM0 186 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 CXorf51AA0A1B0GTR3 108 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 GTPBP10A4D1E9 387 aaKnown RBP8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 TRIM38O00635 465 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 SLC31A1O15431 190 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 BNIP3LO60238 219 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 OPA1O60313 960 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 DAB1O75553 588 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 PIAS2O75928 621 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 PCDH8O95206 1070 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 CALCAP01258 141 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 RHOCP08134 193 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 NOS2P35228 1153 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 KRT9P35527 623 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 USP8P40818 1118 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 LSSP48449 732 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 CLDN6P56747 220 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 RPS21P63220 83 aaKnown RBP8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 CXADRP78310 365 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 CENPCQ03188 943 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 SLC20A2Q08357 652 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 CCDC173Q0VFZ6 552 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 PAK1Q13153 545 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 NME3Q13232 169 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 ZNF284Q2VY69 593 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 PIP5KL1Q5T9C9 394 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 CDCP2Q5VXM1 449 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 KIAA1161Q6NSJ0 714 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 RETSATQ6NUM9 610 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 KDM7AQ6ZMT4 941 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 ERN2Q76MJ5 926 aaKnown RBP8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 SLC26A9Q7LBE3 791 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 ABI3BPQ7Z7G0 1075 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 LAPTM4BQ86VI4 370 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 ERICH1Q86X53 443 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 CIR1Q86X95 450 aaPredicted RBP8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 SPACA3Q8IXA5 215 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 SLC25A45Q8N413 288 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 ZNF397Q8NF99 534 aaPredicted RBP8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 TPCN2Q8NHX9 752 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 CCDC97Q96F63 343 aaPredicted RBP8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 FEM1CQ96JP0 617 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 CPXM1Q96SM3 734 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 CALN1Q9BXU9 219 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 DPH1Q9BZG8 443 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 CEP44Q9C0F1 390 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 WDCPQ9H6R7 721 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 POLR1BQ9H9Y6 1135 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 THSD1Q9NS62 852 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 COX16Q9P0S2 106 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 IL36AQ9UHA7 158 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 CTNND2Q9UQB3 1225 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 RAI2Q9Y5P3 530 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 HS3ST4Q9Y661 456 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 HS3ST3A1Q9Y663 406 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 CSNK1G3Q9Y6M4 447 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 CELSR3Q9NYQ7 3312 aa8.21□□□□□ -1.1
NIF3L1-209ENST00000454952 M0QYT0 321 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 SCAMP1O15126 338 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 FFAR2O15552 330 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 LZTS3O60299 673 aaPredicted RBP8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 PAGE1O75459 146 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 SRCP12931 536 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 PLA2G2AP14555 144 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 PRLRP16471 622 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 ITGB7P26010 798 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 SCNN1AP37088 669 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 ETFBP38117 255 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 RABIFP47224 123 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 RPIAP49247 311 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 NEK3P51956 506 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 METAP1P53582 386 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 GEMIN4P57678 1058 aaKnown RBP8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 TAS2R38P59533 333 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 BPIFB4P59827 614 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 GABREP78334 506 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 PITX1P78337 314 aaPredicted RBP8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 SLC6A3Q01959 620 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 CFHR1Q03591 330 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 SGCGQ13326 291 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 MORC3Q14149 939 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 TAF5Q15542 800 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 POM121L1PQ3SYA9 428 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 TAF1BQ53T94 588 aaPredicted RBP8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 OR6B2Q6IFH4 312 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 ZCCHC8Q6NZY4 707 aaKnown RBP8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 TRIM65Q6PJ69 517 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 IGF2-ASQ6U949 168 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 OLFML1Q6UWY5 402 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 KYAT3Q6YP21 454 aaKnown RBP8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 GBP6Q6ZN66 633 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms