RNA–Protein interactions for RNA: ENST00000454498.6

CSGALNACT1-203, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 4,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-203ENST00000454498 CLCN5P51795 746 aa10.18□□□□□ -0.78
CSGALNACT1-203ENST00000454498 PTPRNQ16849 979 aa10.18□□□□□ -0.78
CSGALNACT1-203ENST00000454498 ATP6AP1LQ52LC2 224 aa10.18□□□□□ -0.78
CSGALNACT1-203ENST00000454498 VARS2Q5ST30 1063 aaKnown RBP10.18□□□□□ -0.78
CSGALNACT1-203ENST00000454498 SH3PXD2AQ5TCZ1 1133 aa10.18□□□□□ -0.78
CSGALNACT1-203ENST00000454498 CDCA2Q69YH5 1023 aaPredicted RBP10.18□□□□□ -0.78
CSGALNACT1-203ENST00000454498 SLC41A1Q8IVJ1 513 aa10.18□□□□□ -0.78
CSGALNACT1-203ENST00000454498 FAM9CQ8IZT9 166 aa10.18□□□□□ -0.78
CSGALNACT1-203ENST00000454498 STK40Q8N2I9 435 aa10.18□□□□□ -0.78
CSGALNACT1-203ENST00000454498 HJURPQ8NCD3 748 aaPredicted RBP10.18□□□□□ -0.78
CSGALNACT1-203ENST00000454498 PCDH19Q8TAB3 1148 aa10.18□□□□□ -0.78
CSGALNACT1-203ENST00000454498 CXorf38Q8TB03 319 aa10.18□□□□□ -0.78
CSGALNACT1-203ENST00000454498 HDAC10Q969S8 669 aa10.18□□□□□ -0.78
CSGALNACT1-203ENST00000454498 NDNQ99608 321 aa10.18□□□□□ -0.78
CSGALNACT1-203ENST00000454498 POMKQ9H5K3 350 aa10.18□□□□□ -0.78
CSGALNACT1-203ENST00000454498 PARVBQ9HBI1 364 aa10.18□□□□□ -0.78
CSGALNACT1-203ENST00000454498 THG1LQ9NWX6 298 aaKnown RBP10.18□□□□□ -0.78
CSGALNACT1-203ENST00000454498 CACNG4Q9UBN1 327 aa10.18□□□□□ -0.78
CSGALNACT1-203ENST00000454498 GTF2IRD1Q9UHL9 959 aa10.18□□□□□ -0.78
CSGALNACT1-203ENST00000454498 STARD13Q9Y3M8 1113 aa10.18□□□□□ -0.78
CSGALNACT1-203ENST00000454498 PCDHB9Q9Y5E1 797 aa10.18□□□□□ -0.78
CSGALNACT1-203ENST00000454498 PKD1L3Q7Z443 1732 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 ZSCAN9O15535 394 aaPredicted RBP10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 SNAI1O95863 264 aaPredicted RBP10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 LTA4HP09960 611 aaKnown RBP10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 L1CAMP32004 1257 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 SOAT1P35610 550 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 ABL2P42684 1182 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 ATXN1P54253 815 aaKnown RBP10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 SNRPD1P62314 119 aaKnown RBP10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 STARD3Q14849 445 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 TRMT5Q32P41 509 aaKnown RBP10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 PACS1Q6VY07 963 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 CMC1Q7Z7K0 106 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 C11orf96Q7Z7L8 435 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 TAC4Q86UU9 113 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 FAM228AQ86W67 206 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 IRGQQ8WZA9 623 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 NAF1Q96HR8 494 aaKnown RBP10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 PCYT2Q99447 389 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 LPIN3Q9BQK8 851 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 MYLK2Q9H1R3 596 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 ASB8Q9H765 288 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 VPS45Q9NRW7 570 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 KCNK4Q9NYG8 393 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 SLC9A3R1O14745 358 aaPredicted RBP10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 PPEF2O14830 753 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 CDH2P19022 906 aaPredicted RBP10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 TFEBP19484 476 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 PTGIRP43119 386 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 MAPK8P45983 427 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 RAP1GDS1P52306 607 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 TBL3Q12788 808 aaKnown RBP10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 RNASEH2BQ5TBB1 312 aaKnown RBP10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 MFSD5Q6N075 450 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 USP45Q70EL2 814 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 SYTL1Q8IYJ3 562 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 GRIN3AQ8TCU5 1115 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 MCOLN3Q8TDD5 553 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 CLEC4CQ8WTT0 213 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 CRYGNQ8WXF5 182 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 OLFM3Q96PB7 478 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 PPP1R10Q96QC0 940 aaKnown RBP10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 TEX12Q9BXU0 123 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 ADNPQ9H2P0 1102 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 PTPRHQ9HD43 1115 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 POLG2Q9UHN1 485 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 FAM237BA0A1B0GVD1 139 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 OR56A5P0C7T3 313 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 SPATA31D3P0C874 917 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 MLNP12872 115 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 TPSB2P20231 275 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 DRD4P21917 467 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 KCNA3P22001 575 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 MSLNQ13421 630 aaPredicted RBP10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 TPSAB1Q15661 275 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 PFKFB4Q16877 469 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 ACBD5Q5T8D3 534 aaPredicted RBP10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 ANKRD22Q5VYY1 191 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 SPATA31D4Q6ZUB0 917 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 TRMT11Q7Z4G4 463 aaKnown RBP10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 GPSM1Q86YR5 675 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 ZC3H3Q8IXZ2 948 aaKnown RBP10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 TNS4Q8IZW8 715 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 STAG3L4Q8TBR4 150 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 KCTD4Q8WVF5 259 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 SIKE1Q9BRV8 207 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 ZCCHC2Q9C0B9 1178 aaKnown RBP10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 PLK2Q9NYY3 685 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 CCDC167Q9P0B6 97 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 AGO1Q9UL18 857 aaKnown RBP10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 C4BP0C0L5 1744 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 MYH3P11055 1940 aa10.17□□□□□ -0.78
CSGALNACT1-203ENST00000454498 TBC1D3BA6NDS4 549 aa10.16□□□□□ -0.78
CSGALNACT1-203ENST00000454498 CXCL14O95715 111 aa10.16□□□□□ -0.78
CSGALNACT1-203ENST00000454498 EOMESO95936 686 aa10.16□□□□□ -0.78
CSGALNACT1-203ENST00000454498 SLC2A4P14672 509 aa10.16□□□□□ -0.78
CSGALNACT1-203ENST00000454498 HLA-DPA1P20036 260 aa10.16□□□□□ -0.78
CSGALNACT1-203ENST00000454498 ATP5F1P24539 256 aaPredicted RBP10.16□□□□□ -0.78
CSGALNACT1-203ENST00000454498 PSMA4P25789 261 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms