RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 SPACA7Q96KW9 195 aa28.51■■■□□ 2.15
SMARCC1-203ENST00000454240 TNKS2Q9H2K2 1166 aa28.51■■■□□ 2.15
SMARCC1-203ENST00000454240 THADAQ6YHU6 1953 aa28.51■■■□□ 2.15
SMARCC1-203ENST00000454240 SHROOM3Q8TF72 1996 aa28.51■■■□□ 2.15
SMARCC1-203ENST00000454240 IGHV1OR15-9A0A0B4J2B8 117 aa28.5■■■□□ 2.15
SMARCC1-203ENST00000454240 KRT86O43790 486 aa28.5■■■□□ 2.15
SMARCC1-203ENST00000454240 DNTTP04053 509 aa28.5■■■□□ 2.15
SMARCC1-203ENST00000454240 ACADMP11310 421 aa28.5■■■□□ 2.15
SMARCC1-203ENST00000454240 TPMTP51580 245 aa28.5■■■□□ 2.15
SMARCC1-203ENST00000454240 IL10RBQ08334 325 aa28.5■■■□□ 2.15
SMARCC1-203ENST00000454240 CST6Q15828 149 aa28.5■■■□□ 2.15
SMARCC1-203ENST00000454240 TAZQ16635 292 aa28.5■■■□□ 2.15
SMARCC1-203ENST00000454240 ARHGAP36Q6ZRI8 547 aa28.5■■■□□ 2.15
SMARCC1-203ENST00000454240 CEP68Q76N32 757 aa28.5■■■□□ 2.15
SMARCC1-203ENST00000454240 C11orf74Q86VG3 221 aa28.5■■■□□ 2.15
SMARCC1-203ENST00000454240 CACUL1Q86Y37 369 aa28.5■■■□□ 2.15
SMARCC1-203ENST00000454240 FAM160A2Q8N612 972 aaPredicted RBP28.5■■■□□ 2.15
SMARCC1-203ENST00000454240 KRT35Q92764 455 aa28.5■■■□□ 2.15
SMARCC1-203ENST00000454240 ZC3H10Q96K80 434 aaKnown RBP28.5■■■□□ 2.15
SMARCC1-203ENST00000454240 CCDC114Q96M63 670 aa28.5■■■□□ 2.15
SMARCC1-203ENST00000454240 IPO11Q9UI26 975 aaKnown RBP28.5■■■□□ 2.15
SMARCC1-203ENST00000454240 MBD1Q9UIS9 605 aaPredicted RBP28.5■■■□□ 2.15
SMARCC1-203ENST00000454240 PPM1HQ9ULR3 514 aa28.5■■■□□ 2.15
SMARCC1-203ENST00000454240 SCML1Q9UN30 329 aa28.5■■■□□ 2.15
SMARCC1-203ENST00000454240 CYP8B1Q9UNU6 501 aa28.5■■■□□ 2.15
SMARCC1-203ENST00000454240 SBDSQ9Y3A5 250 aaKnown RBP eCLIP28.5■■■□□ 2.15
SMARCC1-203ENST00000454240 PCDHA3Q9Y5H8 950 aa28.5■■■□□ 2.15
SMARCC1-203ENST00000454240 PALMO75781 387 aa28.49■■■□□ 2.15
SMARCC1-203ENST00000454240 TMCC1O94876 653 aa28.49■■■□□ 2.15
SMARCC1-203ENST00000454240 BCKDHBP21953 392 aa28.49■■■□□ 2.15
SMARCC1-203ENST00000454240 CTNNA1P35221 906 aaKnown RBP28.49■■■□□ 2.15
SMARCC1-203ENST00000454240 MARCKSL1P49006 195 aa28.49■■■□□ 2.15
SMARCC1-203ENST00000454240 ODF2Q5BJF6 829 aa28.49■■■□□ 2.15
SMARCC1-203ENST00000454240 CARD16Q5EG05 197 aa28.49■■■□□ 2.15
SMARCC1-203ENST00000454240 MFSD7Q6UXD7 560 aa28.49■■■□□ 2.15
SMARCC1-203ENST00000454240 NT5DC3Q86UY8 548 aa28.49■■■□□ 2.15
SMARCC1-203ENST00000454240 NKD2Q969F2 451 aaPredicted RBP28.49■■■□□ 2.15
SMARCC1-203ENST00000454240 UBA2Q9UBT2 640 aaPredicted RBP28.49■■■□□ 2.15
SMARCC1-203ENST00000454240 FARP1Q9Y4F1 1045 aaPredicted RBP28.49■■■□□ 2.15
SMARCC1-203ENST00000454240 MFSD11O43934 449 aa28.48■■■□□ 2.15
SMARCC1-203ENST00000454240 BNIP3LO60238 219 aa28.48■■■□□ 2.15
SMARCC1-203ENST00000454240 ZRANB2O95218 330 aaKnown RBP eCLIP28.48■■■□□ 2.15
SMARCC1-203ENST00000454240 CTNNA2P26232 953 aa28.48■■■□□ 2.15
SMARCC1-203ENST00000454240 CDKN2BP42772 138 aa28.48■■■□□ 2.15
SMARCC1-203ENST00000454240 CYTH1Q15438 398 aa28.48■■■□□ 2.15
SMARCC1-203ENST00000454240 PLK5Q496M5 336 aa28.48■■■□□ 2.15
SMARCC1-203ENST00000454240 SLC9A4Q6AI14 798 aa28.48■■■□□ 2.15
SMARCC1-203ENST00000454240 DPY19L3Q6ZPD9 716 aa28.48■■■□□ 2.15
SMARCC1-203ENST00000454240 PRR23BQ6ZRT6 265 aa28.48■■■□□ 2.15
SMARCC1-203ENST00000454240 DSG4Q86SJ6 1040 aa28.48■■■□□ 2.15
SMARCC1-203ENST00000454240 KBTBD6Q86V97 674 aa28.48■■■□□ 2.15
SMARCC1-203ENST00000454240 RCOR2Q8IZ40 523 aa28.48■■■□□ 2.15
SMARCC1-203ENST00000454240 SYCE1Q8N0S2 351 aa28.48■■■□□ 2.15
SMARCC1-203ENST00000454240 DUSP15Q9H1R2 295 aaPredicted RBP28.48■■■□□ 2.15
SMARCC1-203ENST00000454240 PABPC3Q9H361 631 aaKnown RBP28.48■■■□□ 2.15
SMARCC1-203ENST00000454240 SARDHQ9UL12 918 aa28.48■■■□□ 2.15
SMARCC1-203ENST00000454240 GUCA1BQ9UMX6 200 aa28.48■■■□□ 2.15
SMARCC1-203ENST00000454240 CAPN6Q9Y6Q1 641 aa28.48■■■□□ 2.15
SMARCC1-203ENST00000454240 MID1O15344 667 aa28.47■■■□□ 2.15
SMARCC1-203ENST00000454240 MAFKO60675 156 aa28.47■■■□□ 2.15
SMARCC1-203ENST00000454240 ADH1BP00325 375 aa28.47■■■□□ 2.15
SMARCC1-203ENST00000454240 IL1BP01584 269 aa28.47■■■□□ 2.15
SMARCC1-203ENST00000454240 LMNAP02545 664 aaKnown RBP28.47■■■□□ 2.15
SMARCC1-203ENST00000454240 CHRNA3P32297 505 aa28.47■■■□□ 2.15
SMARCC1-203ENST00000454240 SLC8A1P32418 973 aa28.47■■■□□ 2.15
SMARCC1-203ENST00000454240 RECQLP46063 649 aaPredicted RBP28.47■■■□□ 2.15
SMARCC1-203ENST00000454240 LRRC49Q8IUZ0 686 aa28.47■■■□□ 2.15
SMARCC1-203ENST00000454240 PLD5Q8N7P1 536 aa28.47■■■□□ 2.15
SMARCC1-203ENST00000454240 CHST14Q8NCH0 376 aa28.47■■■□□ 2.15
SMARCC1-203ENST00000454240 EXD1Q8NHP7 514 aa28.47■■■□□ 2.15
SMARCC1-203ENST00000454240 MAK16Q9BXY0 300 aaKnown RBP28.47■■■□□ 2.15
SMARCC1-203ENST00000454240 SP110Q9HB58 689 aa28.47■■■□□ 2.15
SMARCC1-203ENST00000454240 WSB2Q9NYS7 404 aaPredicted RBP28.47■■■□□ 2.15
SMARCC1-203ENST00000454240 SMG5Q9UPR3 1016 aaKnown RBP28.47■■■□□ 2.15
SMARCC1-203ENST00000454240 CCDC66A2RUB6 948 aa28.46■■■□□ 2.15
SMARCC1-203ENST00000454240 GSRP00390 522 aa28.46■■■□□ 2.15
SMARCC1-203ENST00000454240 CTSLP07711 333 aa28.46■■■□□ 2.15
SMARCC1-203ENST00000454240 C5AR1P21730 350 aa28.46■■■□□ 2.15
SMARCC1-203ENST00000454240 OXTRP30559 389 aa28.46■■■□□ 2.15
SMARCC1-203ENST00000454240 PSMD8P48556 350 aa28.46■■■□□ 2.15
SMARCC1-203ENST00000454240 PEX5P50542 639 aa28.46■■■□□ 2.15
SMARCC1-203ENST00000454240 DNA2P51530 1060 aa28.46■■■□□ 2.15
SMARCC1-203ENST00000454240 GALNT2Q10471 571 aa28.46■■■□□ 2.15
SMARCC1-203ENST00000454240 TTC31Q49AM3 519 aaPredicted RBP28.46■■■□□ 2.15
SMARCC1-203ENST00000454240 SLC36A4Q6YBV0 504 aa28.46■■■□□ 2.15
SMARCC1-203ENST00000454240 SPOCD1Q6ZMY3 1216 aa28.46■■■□□ 2.15
SMARCC1-203ENST00000454240 USP30Q70CQ3 517 aa28.46■■■□□ 2.15
SMARCC1-203ENST00000454240 TMIEQ8NEW7 156 aa28.46■■■□□ 2.15
SMARCC1-203ENST00000454240 OR2AP1Q8NGE2 309 aa28.46■■■□□ 2.15
SMARCC1-203ENST00000454240 TM6SF2Q9BZW4 377 aa28.46■■■□□ 2.15
SMARCC1-203ENST00000454240 KCNF1Q9H3M0 494 aa28.46■■■□□ 2.15
SMARCC1-203ENST00000454240 AMFRQ9UKV5 643 aa28.46■■■□□ 2.15
SMARCC1-203ENST00000454240 PPP2R2CQ9Y2T4 447 aa28.46■■■□□ 2.15
SMARCC1-203ENST00000454240 PEX11BO96011 259 aa28.45■■■□□ 2.14
SMARCC1-203ENST00000454240 PTMAP06454 111 aaKnown RBP28.45■■■□□ 2.14
SMARCC1-203ENST00000454240 CD6P30203 668 aa28.45■■■□□ 2.14
SMARCC1-203ENST00000454240 CCNHP51946 323 aaPredicted RBP28.45■■■□□ 2.14
SMARCC1-203ENST00000454240 SNRPD1P62314 119 aaKnown RBP28.45■■■□□ 2.14
SMARCC1-203ENST00000454240 GBE1Q04446 702 aa28.45■■■□□ 2.14
SMARCC1-203ENST00000454240 SLC10A2Q12908 348 aaPredicted RBP28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms