RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 TFAP2DQ7Z6R9 452 aa24.27■■□□□ 1.48
LYSMD2-202ENST00000454181 DCP2Q8IU60 420 aaKnown RBP24.27■■□□□ 1.48
LYSMD2-202ENST00000454181 LSMEM2Q8N112 164 aa24.27■■□□□ 1.48
LYSMD2-202ENST00000454181 CHST14Q8NCH0 376 aa24.27■■□□□ 1.48
LYSMD2-202ENST00000454181 IFT43Q96FT9 208 aa24.27■■□□□ 1.48
LYSMD2-202ENST00000454181 DEPDC7Q96QD5 511 aa24.27■■□□□ 1.48
LYSMD2-202ENST00000454181 NPY6RQ99463 290 aa24.27■■□□□ 1.48
LYSMD2-202ENST00000454181 SPON2Q9BUD6 331 aa24.27■■□□□ 1.48
LYSMD2-202ENST00000454181 HDAC8Q9BY41 377 aa24.27■■□□□ 1.48
LYSMD2-202ENST00000454181 TNKS2Q9H2K2 1166 aa24.27■■□□□ 1.48
LYSMD2-202ENST00000454181 DNAJC28Q9NX36 388 aa24.27■■□□□ 1.48
LYSMD2-202ENST00000454181 TEX51A0A1B0GUA7 166 aa24.26■■□□□ 1.47
LYSMD2-202ENST00000454181 A6NNZ2 444 aa24.26■■□□□ 1.47
LYSMD2-202ENST00000454181 OPA1O60313 960 aa24.26■■□□□ 1.47
LYSMD2-202ENST00000454181 ENDOD1O94919 500 aa24.26■■□□□ 1.47
LYSMD2-202ENST00000454181 PON1P27169 355 aa24.26■■□□□ 1.47
LYSMD2-202ENST00000454181 MTIF2P46199 727 aaKnown RBP24.26■■□□□ 1.47
LYSMD2-202ENST00000454181 DNA2P51530 1060 aa24.26■■□□□ 1.47
LYSMD2-202ENST00000454181 BPIFB4P59827 614 aa24.26■■□□□ 1.47
LYSMD2-202ENST00000454181 MAPK8IP2Q13387 824 aaPredicted RBP24.26■■□□□ 1.47
LYSMD2-202ENST00000454181 C22orf39Q6P5X5 142 aa24.26■■□□□ 1.47
LYSMD2-202ENST00000454181 Q6ZSR6 202 aa24.26■■□□□ 1.47
LYSMD2-202ENST00000454181 PTAR1Q7Z6K3 402 aaPredicted RBP24.26■■□□□ 1.47
LYSMD2-202ENST00000454181 ZNF248Q8NDW4 579 aa24.26■■□□□ 1.47
LYSMD2-202ENST00000454181 FEM1CQ96JP0 617 aa24.26■■□□□ 1.47
LYSMD2-202ENST00000454181 DUSP23Q9BVJ7 150 aa24.26■■□□□ 1.47
LYSMD2-202ENST00000454181 NLGN3Q9NZ94 848 aa24.26■■□□□ 1.47
LYSMD2-202ENST00000454181 DNAJC12Q9UKB3 198 aa24.26■■□□□ 1.47
LYSMD2-202ENST00000454181 SNX10Q9Y5X0 201 aa24.26■■□□□ 1.47
LYSMD2-202ENST00000454181 MYLKQ15746 1914 aa24.25■■□□□ 1.47
LYSMD2-202ENST00000454181 A0A0D9SEW6 157 aa24.25■■□□□ 1.47
LYSMD2-202ENST00000454181 DRGXA6NNA5 263 aa24.25■■□□□ 1.47
LYSMD2-202ENST00000454181 NEK3P51956 506 aa24.25■■□□□ 1.47
LYSMD2-202ENST00000454181 HNRNPKP61978 463 aaKnown RBP eCLIP24.25■■□□□ 1.47
LYSMD2-202ENST00000454181 RPS21P63220 83 aaKnown RBP24.25■■□□□ 1.47
LYSMD2-202ENST00000454181 CXADRP78310 365 aa24.25■■□□□ 1.47
LYSMD2-202ENST00000454181 TLE3Q04726 772 aa24.25■■□□□ 1.47
LYSMD2-202ENST00000454181 BROXQ5VW32 411 aa24.25■■□□□ 1.47
LYSMD2-202ENST00000454181 SEL1L3Q68CR1 1132 aa24.25■■□□□ 1.47
LYSMD2-202ENST00000454181 ABI3BPQ7Z7G0 1075 aa24.25■■□□□ 1.47
LYSMD2-202ENST00000454181 SLC47A2Q86VL8 602 aa24.25■■□□□ 1.47
LYSMD2-202ENST00000454181 SPACA3Q8IXA5 215 aa24.25■■□□□ 1.47
LYSMD2-202ENST00000454181 TMEM35BQ8NCS4 154 aa24.25■■□□□ 1.47
LYSMD2-202ENST00000454181 APOLD1Q96LR9 279 aa24.25■■□□□ 1.47
LYSMD2-202ENST00000454181 C1orf74Q96LT6 269 aa24.25■■□□□ 1.47
LYSMD2-202ENST00000454181 USP29Q9HBJ7 922 aa24.25■■□□□ 1.47
LYSMD2-202ENST00000454181 PLCB1Q9NQ66 1216 aa24.25■■□□□ 1.47
LYSMD2-202ENST00000454181 MPP6Q9NZW5 540 aa24.25■■□□□ 1.47
LYSMD2-202ENST00000454181 IPO11Q9UI26 975 aaKnown RBP24.25■■□□□ 1.47
LYSMD2-202ENST00000454181 ZFR2Q9UPR6 939 aaKnown RBP24.25■■□□□ 1.47
LYSMD2-202ENST00000454181 PCDHB1Q9Y5F3 818 aa24.25■■□□□ 1.47
LYSMD2-202ENST00000454181 HS3ST3A1Q9Y663 406 aa24.25■■□□□ 1.47
LYSMD2-202ENST00000454181 SHROOM3Q8TF72 1996 aa24.25■■□□□ 1.47
LYSMD2-202ENST00000454181 FOXN3O00409 490 aaPredicted RBP24.24■■□□□ 1.47
LYSMD2-202ENST00000454181 SRGAP2O75044 1071 aa24.24■■□□□ 1.47
LYSMD2-202ENST00000454181 LEFTY1O75610 366 aa24.24■■□□□ 1.47
LYSMD2-202ENST00000454181 PCBP4P57723 403 aaKnown RBP24.24■■□□□ 1.47
LYSMD2-202ENST00000454181 SLC20A2Q08357 652 aa24.24■■□□□ 1.47
LYSMD2-202ENST00000454181 TPD52L1Q16890 204 aaPredicted RBP24.24■■□□□ 1.47
LYSMD2-202ENST00000454181 ZNF542PQ5EBM4 170 aa24.24■■□□□ 1.47
LYSMD2-202ENST00000454181 KIAA1161Q6NSJ0 714 aa24.24■■□□□ 1.47
LYSMD2-202ENST00000454181 GCNT7Q6ZNI0 430 aa24.24■■□□□ 1.47
LYSMD2-202ENST00000454181 DPY19L3Q6ZPD9 716 aa24.24■■□□□ 1.47
LYSMD2-202ENST00000454181 ERICH1Q86X53 443 aa24.24■■□□□ 1.47
LYSMD2-202ENST00000454181 C18orf8Q96DM3 657 aa24.24■■□□□ 1.47
LYSMD2-202ENST00000454181 NAF1Q96HR8 494 aaKnown RBP24.24■■□□□ 1.47
LYSMD2-202ENST00000454181 ZNF578Q96N58 590 aaPredicted RBP24.24■■□□□ 1.47
LYSMD2-202ENST00000454181 SLC17A9Q9BYT1 436 aa24.24■■□□□ 1.47
LYSMD2-202ENST00000454181 OSBPL2Q9H1P3 480 aa24.24■■□□□ 1.47
LYSMD2-202ENST00000454181 ILVBLA1L0T0 632 aa24.23■■□□□ 1.47
LYSMD2-202ENST00000454181 H3BM21 787 aa24.23■■□□□ 1.47
LYSMD2-202ENST00000454181 SCAMP1O15126 338 aa24.23■■□□□ 1.47
LYSMD2-202ENST00000454181 USP12O75317 370 aa24.23■■□□□ 1.47
LYSMD2-202ENST00000454181 MPOP05164 745 aa24.23■■□□□ 1.47
LYSMD2-202ENST00000454181 GP1BAP07359 652 aa24.23■■□□□ 1.47
LYSMD2-202ENST00000454181 TFE3P19532 575 aaPredicted RBP24.23■■□□□ 1.47
LYSMD2-202ENST00000454181 GABREP78334 506 aa24.23■■□□□ 1.47
LYSMD2-202ENST00000454181 SLC25A52Q3SY17 297 aa24.23■■□□□ 1.47
LYSMD2-202ENST00000454181 FAM102AQ5T9C2 384 aaPredicted RBP24.23■■□□□ 1.47
LYSMD2-202ENST00000454181 OTUD1Q5VV17 481 aaPredicted RBP24.23■■□□□ 1.47
LYSMD2-202ENST00000454181 ZNF783Q6ZMS7 281 aa24.23■■□□□ 1.47
LYSMD2-202ENST00000454181 OR7D4Q8NG98 312 aa24.23■■□□□ 1.47
LYSMD2-202ENST00000454181 PGAP3Q96FM1 320 aaPredicted RBP24.23■■□□□ 1.47
LYSMD2-202ENST00000454181 TBCBQ99426 244 aa24.23■■□□□ 1.47
LYSMD2-202ENST00000454181 HEPHQ9BQS7 1158 aa24.23■■□□□ 1.47
LYSMD2-202ENST00000454181 ATP13A1Q9HD20 1204 aa24.23■■□□□ 1.47
LYSMD2-202ENST00000454181 ANLNQ9NQW6 1124 aa24.23■■□□□ 1.47
LYSMD2-202ENST00000454181 PTPRQQ9UMZ3 2332 aa24.23■■□□□ 1.47
LYSMD2-202ENST00000454181 DOCK9Q9BZ29 2069 aa24.22■■□□□ 1.47
LYSMD2-202ENST00000454181 CSO75390 466 aaKnown RBP24.22■■□□□ 1.47
LYSMD2-202ENST00000454181 PAK4O96013 591 aaPredicted RBP24.22■■□□□ 1.47
LYSMD2-202ENST00000454181 CLCN1P35523 988 aa24.22■■□□□ 1.47
LYSMD2-202ENST00000454181 SGCGQ13326 291 aa24.22■■□□□ 1.47
LYSMD2-202ENST00000454181 TMEM259Q4ZIN3 620 aa24.22■■□□□ 1.47
LYSMD2-202ENST00000454181 CDCP2Q5VXM1 449 aa24.22■■□□□ 1.47
LYSMD2-202ENST00000454181 ZNF683Q8IZ20 524 aa24.22■■□□□ 1.47
LYSMD2-202ENST00000454181 SLC22A18ASQ8N1D0 253 aa24.22■■□□□ 1.47
LYSMD2-202ENST00000454181 PCDH20Q8N6Y1 951 aaKnown RBP24.22■■□□□ 1.47
LYSMD2-202ENST00000454181 FAM181AQ8N9Y4 354 aa24.22■■□□□ 1.47
LYSMD2-202ENST00000454181 MSANTD4Q8NCY6 345 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms