RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 LRRC31Q6UY01 552 aa11.14□□□□□ -0.63
USP1-204ENST00000452143 ZNF783Q6ZMS7 281 aa11.14□□□□□ -0.63
USP1-204ENST00000452143 ERN2Q76MJ5 926 aaKnown RBP11.14□□□□□ -0.63
USP1-204ENST00000452143 C14orf80Q86SX3 495 aa11.14□□□□□ -0.63
USP1-204ENST00000452143 ZSCAN30Q86W11 494 aa11.14□□□□□ -0.63
USP1-204ENST00000452143 ZNF683Q8IZ20 524 aa11.14□□□□□ -0.63
USP1-204ENST00000452143 SLC25A45Q8N413 288 aa11.14□□□□□ -0.63
USP1-204ENST00000452143 LSM14AQ8ND56 463 aaKnown RBP11.14□□□□□ -0.63
USP1-204ENST00000452143 FGF11Q92914 225 aa11.14□□□□□ -0.63
USP1-204ENST00000452143 C1orf74Q96LT6 269 aa11.14□□□□□ -0.63
USP1-204ENST00000452143 PSMB7Q99436 277 aa11.14□□□□□ -0.63
USP1-204ENST00000452143 CEP44Q9C0F1 390 aa11.14□□□□□ -0.63
USP1-204ENST00000452143 SIK2Q9H0K1 926 aa11.14□□□□□ -0.63
USP1-204ENST00000452143 PRORYQ9H606 182 aa11.14□□□□□ -0.63
USP1-204ENST00000452143 USP29Q9HBJ7 922 aa11.14□□□□□ -0.63
USP1-204ENST00000452143 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.14□□□□□ -0.63
USP1-204ENST00000452143 IL36AQ9UHA7 158 aa11.14□□□□□ -0.63
USP1-204ENST00000452143 NEMP2A6NFY4 417 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 DRGXA6NNA5 263 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 A6NNZ2 444 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 I6L893 689 aaPredicted RBP11.13□□□□□ -0.63
USP1-204ENST00000452143 RIOK3O14730 519 aaKnown RBP11.13□□□□□ -0.63
USP1-204ENST00000452143 SLC31A1O15431 190 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 BRINP1O60477 761 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 SNAP91O60641 907 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 PIAS2O75928 621 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 CNTN5O94779 1100 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 ADCY5O95622 1261 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 MT-CO1P00395 513 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 GP1BAP07359 652 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 CKMT1AP12532 417 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 PRLRP16471 622 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 RRM1P23921 792 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 ITPKBP27987 946 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 OR1E1P30953 314 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 CDH5P33151 784 aaPredicted RBP11.13□□□□□ -0.63
USP1-204ENST00000452143 NEK3P51956 506 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 APBA1Q02410 837 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 DEUP1Q05D60 604 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 TBC1D25Q3MII6 688 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 SLC25A52Q3SY17 297 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 TMEM259Q4ZIN3 620 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 KIAA1161Q6NSJ0 714 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 GCNT7Q6ZNI0 430 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 ABI3BPQ7Z7G0 1075 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 SLC47A2Q86VL8 602 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 DCP2Q8IU60 420 aaKnown RBP11.13□□□□□ -0.63
USP1-204ENST00000452143 TMEM35BQ8NCS4 154 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 OR13H1Q8NG92 308 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 GRIN3AQ8TCU5 1115 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 ARRDC3Q96B67 414 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 FCRL3Q96P31 734 aaPredicted RBP11.13□□□□□ -0.63
USP1-204ENST00000452143 DUSP23Q9BVJ7 150 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 CALN1Q9BXU9 219 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 SIX2Q9NPC8 291 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 GPR27Q9NS67 375 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 EVA1BQ9NVM1 165 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 NLGN3Q9NZ94 848 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 KIAA1468Q9P260 1216 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 DNAJC12Q9UKB3 198 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 CA5BQ9Y2D0 317 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 TENM4Q6N022 2769 aa11.13□□□□□ -0.63
USP1-204ENST00000452143 A0A0D9SEW6 157 aa11.12□□□□□ -0.63
USP1-204ENST00000452143 TEX51A0A1B0GUA7 166 aa11.12□□□□□ -0.63
USP1-204ENST00000452143 ILVBLA1L0T0 632 aa11.12□□□□□ -0.63
USP1-204ENST00000452143 K7ERQ8 282 aa11.12□□□□□ -0.63
USP1-204ENST00000452143 ATXN7O15265 892 aaPredicted RBP11.12□□□□□ -0.63
USP1-204ENST00000452143 SMAD6O43541 496 aaKnown RBP11.12□□□□□ -0.63
USP1-204ENST00000452143 LSM8O95777 96 aaKnown RBP11.12□□□□□ -0.63
USP1-204ENST00000452143 MT-CO3P00414 261 aa11.12□□□□□ -0.63
USP1-204ENST00000452143 ITGB7P26010 798 aa11.12□□□□□ -0.63
USP1-204ENST00000452143 CLCN1P35523 988 aa11.12□□□□□ -0.63
USP1-204ENST00000452143 MTIF2P46199 727 aaKnown RBP11.12□□□□□ -0.63
USP1-204ENST00000452143 GABRB2P47870 512 aa11.12□□□□□ -0.63
USP1-204ENST00000452143 SERPINH1P50454 418 aaKnown RBP11.12□□□□□ -0.63
USP1-204ENST00000452143 HNRNPKP61978 463 aaKnown RBP eCLIP11.12□□□□□ -0.63
USP1-204ENST00000452143 SLC20A2Q08357 652 aa11.12□□□□□ -0.63
USP1-204ENST00000452143 MAN2A1Q16706 1144 aa11.12□□□□□ -0.63
USP1-204ENST00000452143 FAM102AQ5T9C2 384 aaPredicted RBP11.12□□□□□ -0.63
USP1-204ENST00000452143 RETSATQ6NUM9 610 aa11.12□□□□□ -0.63
USP1-204ENST00000452143 KYAT3Q6YP21 454 aaKnown RBP11.12□□□□□ -0.63
USP1-204ENST00000452143 DPY19L3Q6ZPD9 716 aa11.12□□□□□ -0.63
USP1-204ENST00000452143 ARCQ7LC44 396 aa11.12□□□□□ -0.63
USP1-204ENST00000452143 TFAP2DQ7Z6R9 452 aa11.12□□□□□ -0.63
USP1-204ENST00000452143 ERICH1Q86X53 443 aa11.12□□□□□ -0.63
USP1-204ENST00000452143 IRF2BP1Q8IU81 584 aa11.12□□□□□ -0.63
USP1-204ENST00000452143 CREBRFQ8IUR6 639 aa11.12□□□□□ -0.63
USP1-204ENST00000452143 FAM114A1Q8IWE2 563 aa11.12□□□□□ -0.63
USP1-204ENST00000452143 FAM71AQ8IYT1 594 aa11.12□□□□□ -0.63
USP1-204ENST00000452143 SLC22A18ASQ8N1D0 253 aa11.12□□□□□ -0.63
USP1-204ENST00000452143 PCDH20Q8N6Y1 951 aaKnown RBP11.12□□□□□ -0.63
USP1-204ENST00000452143 MSANTD4Q8NCY6 345 aa11.12□□□□□ -0.63
USP1-204ENST00000452143 C18orf8Q96DM3 657 aa11.12□□□□□ -0.63
USP1-204ENST00000452143 DEPDC7Q96QD5 511 aa11.12□□□□□ -0.63
USP1-204ENST00000452143 HAPLN3Q96S86 360 aa11.12□□□□□ -0.63
USP1-204ENST00000452143 MYOCQ99972 504 aa11.12□□□□□ -0.63
USP1-204ENST00000452143 PDCL3Q9H2J4 239 aa11.12□□□□□ -0.63
USP1-204ENST00000452143 FZD3Q9NPG1 666 aa11.12□□□□□ -0.63
USP1-204ENST00000452143 ANLNQ9NQW6 1124 aa11.12□□□□□ -0.63
USP1-204ENST00000452143 UCKL1Q9NWZ5 548 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms