RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 VPS37BQ9H9H4 285 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 GLOD4Q9HC38 313 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 INTS9Q9NV88 658 aaKnown RBP6.7□□□□□ -1.34
USP46-202ENST00000451218 ZNF358Q9NW07 568 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 POLR3BQ9NW08 1133 aaPredicted RBP6.7□□□□□ -1.34
USP46-202ENST00000451218 UBP1Q9NZI7 540 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 TBC1D30Q9Y2I9 924 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 RRP15Q9Y3B9 282 aaKnown RBP6.7□□□□□ -1.34
USP46-202ENST00000451218 CFAP54Q96N23 3096 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 GAPDHSO14556 408 aaPredicted RBP6.7□□□□□ -1.34
USP46-202ENST00000451218 PPP1R12AO14974 1030 aaPredicted RBP6.7□□□□□ -1.34
USP46-202ENST00000451218 SPAG6O75602 509 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 ALADP13716 330 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 KLHL38Q2WGJ6 581 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 PPM1JQ5JR12 505 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 ZNF771Q7L3S4 317 aaPredicted RBP6.7□□□□□ -1.34
USP46-202ENST00000451218 CEP97Q8IW35 865 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 CMTR2Q8IYT2 770 aaKnown RBP6.7□□□□□ -1.34
USP46-202ENST00000451218 DCP1BQ8IZD4 617 aaKnown RBP6.7□□□□□ -1.34
USP46-202ENST00000451218 SKA1Q96BD8 255 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 BTN2A3PQ96KV6 586 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 CYTH2Q99418 400 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 MGME1Q9BQP7 344 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 FBXO44Q9H4M3 255 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 AGO1Q9UL18 857 aaKnown RBP6.7□□□□□ -1.34
USP46-202ENST00000451218 STARD13Q9Y3M8 1113 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 YIPF1Q9Y548 306 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 ARHGEF37A1IGU5 675 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 PRAMEF11O60813 436 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 SRGAP2BP0DMP2 458 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 YWHAQP27348 245 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 CRHR1P34998 444 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 RFC2P35250 354 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 KCNC3Q14003 757 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 DLG2Q15700 870 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 TUBB8Q3ZCM7 444 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 STXBP5Q5T5C0 1151 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 NUGGCQ68CJ6 796 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 CYHR1Q6ZMK1 362 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 TCEAL8Q8IYN2 117 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 PAWRQ96IZ0 340 aaKnown RBP6.7□□□□□ -1.34
USP46-202ENST00000451218 RANBP9Q96S59 729 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 RBBP8Q99708 897 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 MRPL9Q9BYD2 267 aaKnown RBP6.7□□□□□ -1.34
USP46-202ENST00000451218 AFF4Q9UHB7 1163 aaKnown RBP6.7□□□□□ -1.34
USP46-202ENST00000451218 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.7□□□□□ -1.34
USP46-202ENST00000451218 TM9SF1O15321 606 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 TEX28O15482 410 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 RASSF9O75901 435 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 PROCP04070 461 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 OR1D2P34982 312 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 CETN2P41208 172 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 ARSDP51689 593 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 SMARCB1Q12824 385 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 RAP1GAP2Q684P5 730 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 LVRNQ6Q4G3 990 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 CROCCP2Q86T23 111 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 PALM2Q8IXS6 379 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.7□□□□□ -1.34
USP46-202ENST00000451218 STAMBPL1Q96FJ0 436 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 CERS2Q96G23 380 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 SRPK1Q96SB4 655 aaKnown RBP6.7□□□□□ -1.34
USP46-202ENST00000451218 TRHDEQ9UKU6 1024 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 ST14Q9Y5Y6 855 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 HCFC2Q9Y5Z7 792 aa6.7□□□□□ -1.34
USP46-202ENST00000451218 SDR42E2A6NKP2 422 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 FZD6O60353 706 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 SLC35E2BP0CK96 405 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 STX2P32856 288 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 TBX4P57082 545 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 EFEMP1Q12805 493 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 FSTL4Q6MZW2 842 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 RFWD3Q6PCD5 774 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 ZC3HC1Q86WB0 502 aaKnown RBP6.69□□□□□ -1.34
USP46-202ENST00000451218 CEP57Q86XR8 500 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 FUBP1Q96AE4 644 aaKnown RBP6.69□□□□□ -1.34
USP46-202ENST00000451218 SLC7A6OSQ96CW6 309 aaPredicted RBP6.69□□□□□ -1.34
USP46-202ENST00000451218 MOCOSQ96EN8 888 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 CHFRQ96EP1 664 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 SGSM3Q96HU1 749 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 KLHL5Q96PQ7 755 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 VAT1Q99536 393 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 OCEL1Q9H607 264 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 TNFRSF12AQ9NP84 129 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 TPP1O14773 563 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 NDC80O14777 642 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 ITM2AO43736 263 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 TLR5O60602 858 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 PARNO95453 639 aaKnown RBP6.69□□□□□ -1.34
USP46-202ENST00000451218 JCHAINP01591 159 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 ITGA2BP08514 1039 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 ALOX15P16050 662 aaPredicted RBP6.69□□□□□ -1.34
USP46-202ENST00000451218 BNIP1Q12981 228 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 NR1H3Q13133 447 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 DNAJC3Q13217 504 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 CYTH1Q15438 398 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 BTBD8Q5XKL5 378 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 LRRC6Q86X45 466 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 GPR65Q8IYL9 337 aa6.69□□□□□ -1.34
USP46-202ENST00000451218 GOLGA6L1Q8N7Z2 621 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms