RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 ILVBLA1L0T0 632 aa27.72■■■□□ 2.03
USP42-204ENST00000451154 ZNF821O75541 412 aaPredicted RBP27.72■■■□□ 2.03
USP42-204ENST00000451154 PRNPP04156 253 aa27.72■■■□□ 2.03
USP42-204ENST00000451154 CLCN6P51797 869 aa27.72■■■□□ 2.03
USP42-204ENST00000451154 CT47A1Q5JQC4 288 aaPredicted RBP27.72■■■□□ 2.03
USP42-204ENST00000451154 C22orf39Q6P5X5 142 aa27.72■■■□□ 2.03
USP42-204ENST00000451154 DPY19L3Q6ZPD9 716 aa27.72■■■□□ 2.03
USP42-204ENST00000451154 GRIN3AQ8TCU5 1115 aa27.72■■■□□ 2.03
USP42-204ENST00000451154 HNRNPLLQ8WVV9 542 aaKnown RBP27.72■■■□□ 2.03
USP42-204ENST00000451154 TSC1Q92574 1164 aa27.72■■■□□ 2.03
USP42-204ENST00000451154 METTL5Q9NRN9 209 aaKnown RBP27.72■■■□□ 2.03
USP42-204ENST00000451154 DKK4Q9UBT3 224 aa27.72■■■□□ 2.03
USP42-204ENST00000451154 IL36AQ9UHA7 158 aa27.72■■■□□ 2.03
USP42-204ENST00000451154 NOCTQ9UK39 431 aaKnown RBP27.72■■■□□ 2.03
USP42-204ENST00000451154 SDC3O75056 442 aa27.71■■■□□ 2.03
USP42-204ENST00000451154 RFPL3O75679 317 aa27.71■■■□□ 2.03
USP42-204ENST00000451154 ZMPSTE24O75844 475 aa27.71■■■□□ 2.03
USP42-204ENST00000451154 JUPP14923 745 aa27.71■■■□□ 2.03
USP42-204ENST00000451154 RECQLP46063 649 aaPredicted RBP27.71■■■□□ 2.03
USP42-204ENST00000451154 ACADVLP49748 655 aa27.71■■■□□ 2.03
USP42-204ENST00000451154 CCDC15Q0P6D6 951 aa27.71■■■□□ 2.03
USP42-204ENST00000451154 ZNF284Q2VY69 593 aa27.71■■■□□ 2.03
USP42-204ENST00000451154 SFMBT2Q5VUG0 894 aa27.71■■■□□ 2.03
USP42-204ENST00000451154 ERN2Q76MJ5 926 aaKnown RBP27.71■■■□□ 2.03
USP42-204ENST00000451154 HORMAD1Q86X24 394 aa27.71■■■□□ 2.03
USP42-204ENST00000451154 DRC7Q8IY82 874 aa27.71■■■□□ 2.03
USP42-204ENST00000451154 TRPM6Q9BX84 2022 aa27.71■■■□□ 2.03
USP42-204ENST00000451154 ZYG11BQ9C0D3 744 aa27.71■■■□□ 2.03
USP42-204ENST00000451154 ATP13A1Q9HD20 1204 aa27.71■■■□□ 2.03
USP42-204ENST00000451154 FZD3Q9NPG1 666 aa27.71■■■□□ 2.03
USP42-204ENST00000451154 LEFTY1O75610 366 aa27.7■■■□□ 2.02
USP42-204ENST00000451154 PCDH8O95206 1070 aa27.7■■■□□ 2.02
USP42-204ENST00000451154 C1SP09871 688 aa27.7■■■□□ 2.02
USP42-204ENST00000451154 CHRNB2P17787 502 aa27.7■■■□□ 2.02
USP42-204ENST00000451154 DNA2P51530 1060 aa27.7■■■□□ 2.02
USP42-204ENST00000451154 POLR2FP61218 127 aaKnown RBP27.7■■■□□ 2.02
USP42-204ENST00000451154 C15orf59Q2T9L4 293 aaPredicted RBP27.7■■■□□ 2.02
USP42-204ENST00000451154 COL28A1Q2UY09 1125 aa27.7■■■□□ 2.02
USP42-204ENST00000451154 RETSATQ6NUM9 610 aa27.7■■■□□ 2.02
USP42-204ENST00000451154 NEK5Q6P3R8 708 aa27.7■■■□□ 2.02
USP42-204ENST00000451154 ZNF783Q6ZMS7 281 aa27.7■■■□□ 2.02
USP42-204ENST00000451154 ARCQ7LC44 396 aa27.7■■■□□ 2.02
USP42-204ENST00000451154 TMEM145Q8NBT3 493 aa27.7■■■□□ 2.02
USP42-204ENST00000451154 SLC30A5Q8TAD4 765 aa27.7■■■□□ 2.02
USP42-204ENST00000451154 ENOX1Q8TC92 643 aaKnown RBP27.7■■■□□ 2.02
USP42-204ENST00000451154 ZFR2Q9UPR6 939 aaKnown RBP27.7■■■□□ 2.02
USP42-204ENST00000451154 ACTL7AQ9Y615 435 aa27.7■■■□□ 2.02
USP42-204ENST00000451154 CYP1A1P04798 512 aaPredicted RBP27.69■■■□□ 2.02
USP42-204ENST00000451154 THEGLP0DJG4 465 aa27.69■■■□□ 2.02
USP42-204ENST00000451154 FMO1Q01740 532 aa27.69■■■□□ 2.02
USP42-204ENST00000451154 CDR2Q01850 454 aa27.69■■■□□ 2.02
USP42-204ENST00000451154 GNA12Q03113 381 aa27.69■■■□□ 2.02
USP42-204ENST00000451154 KRT31Q15323 416 aa27.69■■■□□ 2.02
USP42-204ENST00000451154 CDO1Q16878 200 aa27.69■■■□□ 2.02
USP42-204ENST00000451154 ZNF677Q86XU0 584 aa27.69■■■□□ 2.02
USP42-204ENST00000451154 RXFP2Q8WXD0 754 aa27.69■■■□□ 2.02
USP42-204ENST00000451154 HDAC8Q9BY41 377 aa27.69■■■□□ 2.02
USP42-204ENST00000451154 MAGEB5Q9BZ81 275 aa27.69■■■□□ 2.02
USP42-204ENST00000451154 NLRC4Q9NPP4 1024 aa27.69■■■□□ 2.02
USP42-204ENST00000451154 FAM207AQ9NSI2 230 aaPredicted RBP27.69■■■□□ 2.02
USP42-204ENST00000451154 PPARGC1AQ9UBK2 798 aaKnown RBP27.69■■■□□ 2.02
USP42-204ENST00000451154 WASF2Q9Y6W5 498 aa27.69■■■□□ 2.02
USP42-204ENST00000451154 ASXL3Q9C0F0 2248 aa27.69■■■□□ 2.02
USP42-204ENST00000451154 MYLKQ15746 1914 aa27.69■■■□□ 2.02
USP42-204ENST00000451154 EPHB6O15197 1021 aa27.68■■■□□ 2.02
USP42-204ENST00000451154 GJB6O95452 261 aa27.68■■■□□ 2.02
USP42-204ENST00000451154 MMP8P22894 467 aa27.68■■■□□ 2.02
USP42-204ENST00000451154 ADRA1BP35368 520 aa27.68■■■□□ 2.02
USP42-204ENST00000451154 SERPINH1P50454 418 aaKnown RBP27.68■■■□□ 2.02
USP42-204ENST00000451154 ARF5P84085 180 aa27.68■■■□□ 2.02
USP42-204ENST00000451154 SLC20A2Q08357 652 aa27.68■■■□□ 2.02
USP42-204ENST00000451154 CCDC14Q49A88 953 aa27.68■■■□□ 2.02
USP42-204ENST00000451154 SEL1L3Q68CR1 1132 aa27.68■■■□□ 2.02
USP42-204ENST00000451154 SLC25A45Q8N413 288 aa27.68■■■□□ 2.02
USP42-204ENST00000451154 CAAP1Q9H8G2 361 aa27.68■■■□□ 2.02
USP42-204ENST00000451154 LMBRD1Q9NUN5 540 aa27.68■■■□□ 2.02
USP42-204ENST00000451154 OR12D3Q9UGF7 316 aa27.68■■■□□ 2.02
USP42-204ENST00000451154 FCF1Q9Y324 198 aaKnown RBP27.68■■■□□ 2.02
USP42-204ENST00000451154 CDK4P11802 303 aa27.67■■■□□ 2.02
USP42-204ENST00000451154 CKMT2P17540 419 aa27.67■■■□□ 2.02
USP42-204ENST00000451154 AKT2P31751 481 aa27.67■■■□□ 2.02
USP42-204ENST00000451154 SOX5P35711 763 aa27.67■■■□□ 2.02
USP42-204ENST00000451154 ACVRL1P37023 503 aa27.67■■■□□ 2.02
USP42-204ENST00000451154 CLDN2P57739 230 aa27.67■■■□□ 2.02
USP42-204ENST00000451154 CARD16Q5EG05 197 aa27.67■■■□□ 2.02
USP42-204ENST00000451154 CDKAL1Q5VV42 579 aa27.67■■■□□ 2.02
USP42-204ENST00000451154 JOSD2Q8TAC2 188 aa27.67■■■□□ 2.02
USP42-204ENST00000451154 GPT2Q8TD30 523 aa27.67■■■□□ 2.02
USP42-204ENST00000451154 C11orf70Q9BRQ4 267 aa27.67■■■□□ 2.02
USP42-204ENST00000451154 CEP44Q9C0F1 390 aa27.67■■■□□ 2.02
USP42-204ENST00000451154 NDFIP2Q9NV92 336 aa27.67■■■□□ 2.02
USP42-204ENST00000451154 LOC400499M0QZD8 3231 aa27.66■■■□□ 2.02
USP42-204ENST00000451154 TRIM38O00635 465 aa27.66■■■□□ 2.02
USP42-204ENST00000451154 CD160O95971 181 aa27.66■■■□□ 2.02
USP42-204ENST00000451154 HNRNPA2B1P22626 353 aaKnown RBP27.66■■■□□ 2.02
USP42-204ENST00000451154 JAM2P57087 298 aa27.66■■■□□ 2.02
USP42-204ENST00000451154 TARDBPQ13148 414 aaKnown RBP eCLIP27.66■■■□□ 2.02
USP42-204ENST00000451154 RWDD4Q6NW29 188 aaKnown RBP27.66■■■□□ 2.02
USP42-204ENST00000451154 PCDH20Q8N6Y1 951 aaKnown RBP27.66■■■□□ 2.02
USP42-204ENST00000451154 OR13H1Q8NG92 308 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms