RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 CTAGE8P0CG41 777 aa13.28□□□□□ -0.28
VPS33A-202ENST00000451053 NNMTP40261 264 aa13.28□□□□□ -0.28
VPS33A-202ENST00000451053 GARSP41250 739 aaKnown RBP13.28□□□□□ -0.28
VPS33A-202ENST00000451053 TUBB4BP68371 445 aa13.28□□□□□ -0.28
VPS33A-202ENST00000451053 SATB1Q01826 763 aa13.28□□□□□ -0.28
VPS33A-202ENST00000451053 IL10RBQ08334 325 aa13.28□□□□□ -0.28
VPS33A-202ENST00000451053 E2F5Q15329 346 aa13.28□□□□□ -0.28
VPS33A-202ENST00000451053 DLG2Q15700 870 aa13.28□□□□□ -0.28
VPS33A-202ENST00000451053 HNRNPA1L2Q32P51 320 aaKnown RBP13.28□□□□□ -0.28
VPS33A-202ENST00000451053 ACCSLQ4AC99 568 aa13.28□□□□□ -0.28
VPS33A-202ENST00000451053 SDE2Q6IQ49 451 aa13.28□□□□□ -0.28
VPS33A-202ENST00000451053 C22orf39Q6P5X5 142 aa13.28□□□□□ -0.28
VPS33A-202ENST00000451053 B4GALNT4Q76KP1 1039 aa13.28□□□□□ -0.28
VPS33A-202ENST00000451053 SYT13Q7L8C5 426 aa13.28□□□□□ -0.28
VPS33A-202ENST00000451053 ZNF572Q7Z3I7 529 aaPredicted RBP13.28□□□□□ -0.28
VPS33A-202ENST00000451053 CTAGE6Q86UF2 777 aa13.28□□□□□ -0.28
VPS33A-202ENST00000451053 CTAGE4Q8IX94 777 aa13.28□□□□□ -0.28
VPS33A-202ENST00000451053 DTWD2Q8NBA8 298 aa13.28□□□□□ -0.28
VPS33A-202ENST00000451053 FRS2Q8WU20 508 aa13.28□□□□□ -0.28
VPS33A-202ENST00000451053 MS4A14Q96JA4 679 aa13.28□□□□□ -0.28
VPS33A-202ENST00000451053 OLFM3Q96PB7 478 aa13.28□□□□□ -0.28
VPS33A-202ENST00000451053 CD248Q9HCU0 757 aa13.28□□□□□ -0.28
VPS33A-202ENST00000451053 HOMER3Q9NSC5 361 aa13.28□□□□□ -0.28
VPS33A-202ENST00000451053 SPATA6Q9NWH7 488 aaPredicted RBP13.28□□□□□ -0.28
VPS33A-202ENST00000451053 UBA2Q9UBT2 640 aaPredicted RBP13.28□□□□□ -0.28
VPS33A-202ENST00000451053 FCF1Q9Y324 198 aaKnown RBP13.28□□□□□ -0.28
VPS33A-202ENST00000451053 CXorf51AA0A1B0GTR3 108 aa13.27□□□□□ -0.29
VPS33A-202ENST00000451053 CCDC188H7C350 402 aa13.27□□□□□ -0.29
VPS33A-202ENST00000451053 APOC4-APOC2K7ER74 178 aa13.27□□□□□ -0.29
VPS33A-202ENST00000451053 KRIT1O00522 736 aa13.27□□□□□ -0.29
VPS33A-202ENST00000451053 SIN3BO75182 1162 aa13.27□□□□□ -0.29
VPS33A-202ENST00000451053 ZNF821O75541 412 aaPredicted RBP13.27□□□□□ -0.29
VPS33A-202ENST00000451053 TMCC1O94876 653 aa13.27□□□□□ -0.29
VPS33A-202ENST00000451053 SLU7O95391 586 aaKnown RBP13.27□□□□□ -0.29
VPS33A-202ENST00000451053 PEX11BO96011 259 aa13.27□□□□□ -0.29
VPS33A-202ENST00000451053 APOC2P02655 101 aa13.27□□□□□ -0.29
VPS33A-202ENST00000451053 CLCN6P51797 869 aa13.27□□□□□ -0.29
VPS33A-202ENST00000451053 GEMIN4P57678 1058 aaKnown RBP13.27□□□□□ -0.29
VPS33A-202ENST00000451053 SLC20A2Q08357 652 aa13.27□□□□□ -0.29
VPS33A-202ENST00000451053 KLF1Q13351 362 aaPredicted RBP13.27□□□□□ -0.29
VPS33A-202ENST00000451053 CRY1Q16526 586 aa13.27□□□□□ -0.29
VPS33A-202ENST00000451053 Q6ZVU0 165 aa13.27□□□□□ -0.29
VPS33A-202ENST00000451053 TTC13Q8NBP0 860 aa13.27□□□□□ -0.29
VPS33A-202ENST00000451053 P3H4Q92791 437 aa13.27□□□□□ -0.29
VPS33A-202ENST00000451053 HHIPQ96QV1 700 aa13.27□□□□□ -0.29
VPS33A-202ENST00000451053 LGMNQ99538 433 aa13.27□□□□□ -0.29
VPS33A-202ENST00000451053 FAM118BQ9BPY3 351 aa13.27□□□□□ -0.29
VPS33A-202ENST00000451053 LRFN3Q9BTN0 628 aa13.27□□□□□ -0.29
VPS33A-202ENST00000451053 CARD6Q9BX69 1037 aa13.27□□□□□ -0.29
VPS33A-202ENST00000451053 FRMD8P1Q9BZ68 369 aaPredicted RBP13.27□□□□□ -0.29
VPS33A-202ENST00000451053 TNKS2Q9H2K2 1166 aa13.27□□□□□ -0.29
VPS33A-202ENST00000451053 PRSS16Q9NQE7 514 aa13.27□□□□□ -0.29
VPS33A-202ENST00000451053 MYO18AQ92614 2054 aaKnown RBP13.27□□□□□ -0.29
VPS33A-202ENST00000451053 EDDM13A0A1B0GTR0 161 aa13.26□□□□□ -0.29
VPS33A-202ENST00000451053 TCRBV21S2A2A0A5A6 115 aa13.26□□□□□ -0.29
VPS33A-202ENST00000451053 TRIOO75962 3097 aa13.26□□□□□ -0.29
VPS33A-202ENST00000451053 MX2P20592 715 aa13.26□□□□□ -0.29
VPS33A-202ENST00000451053 CXCL12P48061 93 aa13.26□□□□□ -0.29
VPS33A-202ENST00000451053 NR2C2P49116 596 aa13.26□□□□□ -0.29
VPS33A-202ENST00000451053 CCR3P51677 355 aa13.26□□□□□ -0.29
VPS33A-202ENST00000451053 OTUD4Q01804 1114 aaKnown RBP13.26□□□□□ -0.29
VPS33A-202ENST00000451053 PPIDQ08752 370 aaKnown RBP13.26□□□□□ -0.29
VPS33A-202ENST00000451053 SLC10A7Q0GE19 358 aa13.26□□□□□ -0.29
VPS33A-202ENST00000451053 CAMK2GQ13555 558 aaPredicted RBP13.26□□□□□ -0.29
VPS33A-202ENST00000451053 PDK1Q15118 436 aa13.26□□□□□ -0.29
VPS33A-202ENST00000451053 NOMO1Q15155 1222 aa13.26□□□□□ -0.29
VPS33A-202ENST00000451053 CYTH1Q15438 398 aa13.26□□□□□ -0.29
VPS33A-202ENST00000451053 INO80DQ53TQ3 878 aaPredicted RBP13.26□□□□□ -0.29
VPS33A-202ENST00000451053 C9orf64Q5T6V5 341 aa13.26□□□□□ -0.29
VPS33A-202ENST00000451053 TMCO4Q5TGY1 634 aa13.26□□□□□ -0.29
VPS33A-202ENST00000451053 MAMSTRQ6ZN01 415 aa13.26□□□□□ -0.29
VPS33A-202ENST00000451053 LRRC49Q8IUZ0 686 aa13.26□□□□□ -0.29
VPS33A-202ENST00000451053 CCNYQ8ND76 341 aa13.26□□□□□ -0.29
VPS33A-202ENST00000451053 ACTL9Q8TC94 416 aa13.26□□□□□ -0.29
VPS33A-202ENST00000451053 PTPRN2Q92932 1015 aa13.26□□□□□ -0.29
VPS33A-202ENST00000451053 HDAC11Q96DB2 347 aa13.26□□□□□ -0.29
VPS33A-202ENST00000451053 ZNF599Q96NL3 588 aa13.26□□□□□ -0.29
VPS33A-202ENST00000451053 TSGA13Q96PP4 275 aa13.26□□□□□ -0.29
VPS33A-202ENST00000451053 LHX3Q9UBR4 397 aa13.26□□□□□ -0.29
VPS33A-202ENST00000451053 SUN2Q9UH99 717 aa13.26□□□□□ -0.29
VPS33A-202ENST00000451053 SLC8A2Q9UPR5 921 aa13.26□□□□□ -0.29
VPS33A-202ENST00000451053 R3HDM2Q9Y2K5 976 aaKnown RBP13.26□□□□□ -0.29
VPS33A-202ENST00000451053 CKAP5Q14008 2032 aa13.25□□□□□ -0.29
VPS33A-202ENST00000451053 K7ESF4 209 aa13.25□□□□□ -0.29
VPS33A-202ENST00000451053 PDE2AO00408 941 aaPredicted RBP13.25□□□□□ -0.29
VPS33A-202ENST00000451053 RIOK3O14730 519 aaKnown RBP13.25□□□□□ -0.29
VPS33A-202ENST00000451053 LAMTOR5O43504 91 aa13.25□□□□□ -0.29
VPS33A-202ENST00000451053 BNIP3LO60238 219 aa13.25□□□□□ -0.29
VPS33A-202ENST00000451053 SYNCRIPO60506 623 aaKnown RBP13.25□□□□□ -0.29
VPS33A-202ENST00000451053 CCNCP24863 283 aa13.25□□□□□ -0.29
VPS33A-202ENST00000451053 DGKEP52429 567 aa13.25□□□□□ -0.29
VPS33A-202ENST00000451053 COPAP53621 1224 aa13.25□□□□□ -0.29
VPS33A-202ENST00000451053 RHOAP61586 193 aa13.25□□□□□ -0.29
VPS33A-202ENST00000451053 AP1B1Q10567 949 aa13.25□□□□□ -0.29
VPS33A-202ENST00000451053 LBRQ14739 615 aaKnown RBP13.25□□□□□ -0.29
VPS33A-202ENST00000451053 STARD3Q14849 445 aa13.25□□□□□ -0.29
VPS33A-202ENST00000451053 PRKD1Q15139 912 aaPredicted RBP13.25□□□□□ -0.29
VPS33A-202ENST00000451053 FAM182AQ5T1J6 154 aa13.25□□□□□ -0.29
VPS33A-202ENST00000451053 ATXN7L2Q5T6C5 722 aaPredicted RBP13.25□□□□□ -0.29
VPS33A-202ENST00000451053 CCDC70Q6NSX1 233 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms