RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 GDF3Q9NR23 364 aa15.6■□□□□ 0.09
CHD3-205ENST00000449744 TMEM248Q9NWD8 314 aa15.6■□□□□ 0.09
CHD3-205ENST00000449744 IL36AQ9UHA7 158 aa15.6■□□□□ 0.09
CHD3-205ENST00000449744 HPCAL4Q9UM19 191 aa15.6■□□□□ 0.09
CHD3-205ENST00000449744 DMTF1Q9Y222 760 aa15.6■□□□□ 0.09
CHD3-205ENST00000449744 NEUROG3Q9Y4Z2 214 aa15.6■□□□□ 0.09
CHD3-205ENST00000449744 PLXNA2O75051 1894 aa15.6■□□□□ 0.09
CHD3-205ENST00000449744 DOCK4Q8N1I0 1966 aa15.6■□□□□ 0.09
CHD3-205ENST00000449744 LRRC53A6NM62 1247 aa15.59■□□□□ 0.09
CHD3-205ENST00000449744 C10orf142B7Z368 130 aa15.59■□□□□ 0.09
CHD3-205ENST00000449744 FAM72CH0Y354 149 aa15.59■□□□□ 0.09
CHD3-205ENST00000449744 RAMP2O60895 175 aa15.59■□□□□ 0.09
CHD3-205ENST00000449744 ZMPSTE24O75844 475 aa15.59■□□□□ 0.09
CHD3-205ENST00000449744 SERPINC1P01008 464 aa15.59■□□□□ 0.09
CHD3-205ENST00000449744 WNT1P04628 370 aa15.59■□□□□ 0.09
CHD3-205ENST00000449744 FTH1P19P0C7X4 201 aa15.59■□□□□ 0.09
CHD3-205ENST00000449744 ACVRL1P37023 503 aa15.59■□□□□ 0.09
CHD3-205ENST00000449744 GRK6P43250 576 aa15.59■□□□□ 0.09
CHD3-205ENST00000449744 GEMIN4P57678 1058 aaKnown RBP15.59■□□□□ 0.09
CHD3-205ENST00000449744 TPM4P67936 248 aa15.59■□□□□ 0.09
CHD3-205ENST00000449744 ARF5P84085 180 aa15.59■□□□□ 0.09
CHD3-205ENST00000449744 IL9RQ01113 521 aa15.59■□□□□ 0.09
CHD3-205ENST00000449744 STAT4Q14765 748 aa15.59■□□□□ 0.09
CHD3-205ENST00000449744 SETMARQ53H47 684 aaPredicted RBP15.59■□□□□ 0.09
CHD3-205ENST00000449744 ARSIQ5FYB1 569 aa15.59■□□□□ 0.09
CHD3-205ENST00000449744 FAM72AQ5TYM5 149 aa15.59■□□□□ 0.09
CHD3-205ENST00000449744 FAM72DQ6L9T8 149 aa15.59■□□□□ 0.09
CHD3-205ENST00000449744 DPY19L3Q6ZPD9 716 aa15.59■□□□□ 0.09
CHD3-205ENST00000449744 IRF2BP2Q7Z5L9 587 aa15.59■□□□□ 0.09
CHD3-205ENST00000449744 GLRX5Q86SX6 157 aa15.59■□□□□ 0.09
CHD3-205ENST00000449744 NLRP14Q86W24 1093 aa15.59■□□□□ 0.09
CHD3-205ENST00000449744 TRIM69Q86WT6 500 aa15.59■□□□□ 0.09
CHD3-205ENST00000449744 FAM72BQ86X60 149 aa15.59■□□□□ 0.09
CHD3-205ENST00000449744 ZNF354CQ86Y25 554 aa15.59■□□□□ 0.09
CHD3-205ENST00000449744 MCOLN2Q8IZK6 566 aa15.59■□□□□ 0.09
CHD3-205ENST00000449744 GRIN3AQ8TCU5 1115 aa15.59■□□□□ 0.09
CHD3-205ENST00000449744 BAP1Q92560 729 aa15.59■□□□□ 0.09
CHD3-205ENST00000449744 ARRDC3Q96B67 414 aa15.59■□□□□ 0.09
CHD3-205ENST00000449744 ELF4Q99607 663 aaPredicted RBP15.59■□□□□ 0.09
CHD3-205ENST00000449744 CNPY3Q9BT09 278 aa15.59■□□□□ 0.09
CHD3-205ENST00000449744 MAGEB5Q9BZ81 275 aa15.59■□□□□ 0.09
CHD3-205ENST00000449744 MAGEH1Q9H213 219 aa15.59■□□□□ 0.09
CHD3-205ENST00000449744 NDFIP2Q9NV92 336 aa15.59■□□□□ 0.09
CHD3-205ENST00000449744 FCF1Q9Y324 198 aaKnown RBP15.59■□□□□ 0.09
CHD3-205ENST00000449744 KMT2BQ9UMN6 2715 aaPredicted RBP15.59■□□□□ 0.09
CHD3-205ENST00000449744 A0A1B0GTQ1 180 aa15.58■□□□□ 0.08
CHD3-205ENST00000449744 A0A1W2PQC6 194 aa15.58■□□□□ 0.08
CHD3-205ENST00000449744 A0A1W2PR77 199 aa15.58■□□□□ 0.08
CHD3-205ENST00000449744 TCRBV5S1A1TA0A578 114 aa15.58■□□□□ 0.08
CHD3-205ENST00000449744 TMCO5BA8MYB1 307 aa15.58■□□□□ 0.08
CHD3-205ENST00000449744 C1QTNF9BB2RNN3 333 aa15.58■□□□□ 0.08
CHD3-205ENST00000449744 TLR4O00206 839 aa15.58■□□□□ 0.08
CHD3-205ENST00000449744 WNT9AO14904 365 aa15.58■□□□□ 0.08
CHD3-205ENST00000449744 PCDHGA12O60330 932 aa15.58■□□□□ 0.08
CHD3-205ENST00000449744 MAGEC1O60732 1142 aa15.58■□□□□ 0.08
CHD3-205ENST00000449744 RNGTTO60942 597 aaKnown RBP15.58■□□□□ 0.08
CHD3-205ENST00000449744 LEFTY1O75610 366 aa15.58■□□□□ 0.08
CHD3-205ENST00000449744 PROS1P07225 676 aa15.58■□□□□ 0.08
CHD3-205ENST00000449744 C1QTNF9P0C862 333 aa15.58■□□□□ 0.08
CHD3-205ENST00000449744 L1CAMP32004 1257 aa15.58■□□□□ 0.08
CHD3-205ENST00000449744 RPL7AP62424 266 aaKnown RBP15.58■□□□□ 0.08
CHD3-205ENST00000449744 SCAPQ12770 1279 aa15.58■□□□□ 0.08
CHD3-205ENST00000449744 POLD3Q15054 466 aaPredicted RBP15.58■□□□□ 0.08
CHD3-205ENST00000449744 CARD16Q5EG05 197 aa15.58■□□□□ 0.08
CHD3-205ENST00000449744 PRAMEF14Q5SWL7 426 aa15.58■□□□□ 0.08
CHD3-205ENST00000449744 PIP5KL1Q5T9C9 394 aa15.58■□□□□ 0.08
CHD3-205ENST00000449744 SFMBT2Q5VUG0 894 aa15.58■□□□□ 0.08
CHD3-205ENST00000449744 NEK5Q6P3R8 708 aa15.58■□□□□ 0.08
CHD3-205ENST00000449744 ERN2Q76MJ5 926 aaKnown RBP15.58■□□□□ 0.08
CHD3-205ENST00000449744 RYBPQ8N488 228 aaPredicted RBP15.58■□□□□ 0.08
CHD3-205ENST00000449744 MFSD2AQ8NA29 543 aa15.58■□□□□ 0.08
CHD3-205ENST00000449744 ARHGEF2Q92974 986 aaKnown RBP15.58■□□□□ 0.08
CHD3-205ENST00000449744 VCPIP1Q96JH7 1222 aa15.58■□□□□ 0.08
CHD3-205ENST00000449744 EPAS1Q99814 870 aa15.58■□□□□ 0.08
CHD3-205ENST00000449744 HEPHQ9BQS7 1158 aa15.58■□□□□ 0.08
CHD3-205ENST00000449744 KLK13Q9UKR3 277 aa15.58■□□□□ 0.08
CHD3-205ENST00000449744 TMEM131Q92545 1883 aa15.58■□□□□ 0.08
CHD3-205ENST00000449744 LAMA1P25391 3075 aa15.57■□□□□ 0.08
CHD3-205ENST00000449744 A0A1B0GTH6 734 aa15.57■□□□□ 0.08
CHD3-205ENST00000449744 CXorf51AA0A1B0GTR3 108 aa15.57■□□□□ 0.08
CHD3-205ENST00000449744 PRAMEF26H0Y7S4 382 aa15.57■□□□□ 0.08
CHD3-205ENST00000449744 YKT6O15498 198 aa15.57■□□□□ 0.08
CHD3-205ENST00000449744 CREB3O43889 395 aa15.57■□□□□ 0.08
CHD3-205ENST00000449744 ITGAVP06756 1048 aa15.57■□□□□ 0.08
CHD3-205ENST00000449744 EPHB2P29323 1055 aa15.57■□□□□ 0.08
CHD3-205ENST00000449744 ARRB1P49407 418 aaPredicted RBP15.57■□□□□ 0.08
CHD3-205ENST00000449744 CCNHP51946 323 aaPredicted RBP15.57■□□□□ 0.08
CHD3-205ENST00000449744 NEK3P51956 506 aa15.57■□□□□ 0.08
CHD3-205ENST00000449744 AIF1P55008 147 aa15.57■□□□□ 0.08
CHD3-205ENST00000449744 NXPH1P58417 271 aa15.57■□□□□ 0.08
CHD3-205ENST00000449744 TAS2R38P59533 333 aa15.57■□□□□ 0.08
CHD3-205ENST00000449744 PPP1R15BQ5SWA1 713 aa15.57■□□□□ 0.08
CHD3-205ENST00000449744 RAB44Q7Z6P3 723 aaPredicted RBP15.57■□□□□ 0.08
CHD3-205ENST00000449744 PYROXD2Q8N2H3 581 aa15.57■□□□□ 0.08
CHD3-205ENST00000449744 OXR1Q8N573 874 aa15.57■□□□□ 0.08
CHD3-205ENST00000449744 PNPLA1Q8N8W4 532 aa15.57■□□□□ 0.08
CHD3-205ENST00000449744 BAHD1Q8TBE0 780 aaPredicted RBP15.57■□□□□ 0.08
CHD3-205ENST00000449744 ADAMTS14Q8WXS8 1223 aa15.57■□□□□ 0.08
CHD3-205ENST00000449744 NAP1L5Q96NT1 182 aaPredicted RBP15.57■□□□□ 0.08
CHD3-205ENST00000449744 TM6SF2Q9BZW4 377 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms