RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 IGSF10Q6WRI0 2623 aa14.9□□□□□ -0.02
USP39-206ENST00000448971 CBX4O00257 560 aa14.9□□□□□ -0.02
USP39-206ENST00000448971 BNIP3LO60238 219 aa14.9□□□□□ -0.02
USP39-206ENST00000448971 RAMP2O60895 175 aa14.9□□□□□ -0.02
USP39-206ENST00000448971 LRCH4O75427 683 aa14.9□□□□□ -0.02
USP39-206ENST00000448971 CYP1A2P05177 515 aa14.9□□□□□ -0.02
USP39-206ENST00000448971 MIPP30301 263 aa14.9□□□□□ -0.02
USP39-206ENST00000448971 ETFBP38117 255 aa14.9□□□□□ -0.02
USP39-206ENST00000448971 GNA12Q03113 381 aa14.9□□□□□ -0.02
USP39-206ENST00000448971 TBX2Q13207 712 aaPredicted RBP14.9□□□□□ -0.02
USP39-206ENST00000448971 FAM124AQ86V42 546 aa14.9□□□□□ -0.02
USP39-206ENST00000448971 NLRP14Q86W24 1093 aa14.9□□□□□ -0.02
USP39-206ENST00000448971 ATP11CQ8NB49 1132 aa14.9□□□□□ -0.02
USP39-206ENST00000448971 BTBD6Q96KE9 485 aa14.9□□□□□ -0.02
USP39-206ENST00000448971 CAMK1GQ96NX5 476 aa14.9□□□□□ -0.02
USP39-206ENST00000448971 PEBP4Q96S96 227 aa14.9□□□□□ -0.02
USP39-206ENST00000448971 PSMB7Q99436 277 aa14.9□□□□□ -0.02
USP39-206ENST00000448971 CHP1Q99653 195 aa14.9□□□□□ -0.02
USP39-206ENST00000448971 NCAPGQ9BPX3 1015 aa14.9□□□□□ -0.02
USP39-206ENST00000448971 PACSIN1Q9BY11 444 aa14.9□□□□□ -0.02
USP39-206ENST00000448971 CATSPERBQ9H7T0 1116 aa14.9□□□□□ -0.02
USP39-206ENST00000448971 NHEJ1Q9H9Q4 299 aaPredicted RBP14.9□□□□□ -0.02
USP39-206ENST00000448971 SPTLC3Q9NUV7 552 aa14.9□□□□□ -0.02
USP39-206ENST00000448971 USP36Q9P275 1121 aaKnown RBP14.9□□□□□ -0.02
USP39-206ENST00000448971 ZNF212Q9UDV6 495 aa14.9□□□□□ -0.02
USP39-206ENST00000448971 IP6K2Q9UHH9 426 aa14.9□□□□□ -0.02
USP39-206ENST00000448971 NENFQ9UMX5 172 aa14.9□□□□□ -0.02
USP39-206ENST00000448971 NYNRINQ9P2P1 1898 aaKnown RBP14.9□□□□□ -0.02
USP39-206ENST00000448971 URB1O60287 2271 aaKnown RBP14.9□□□□□ -0.02
USP39-206ENST00000448971 ADAMTS20P59510 1910 aa14.9□□□□□ -0.02
USP39-206ENST00000448971 EEF2KO00418 725 aaKnown RBP14.89□□□□□ -0.03
USP39-206ENST00000448971 FGF10O15520 208 aaPredicted RBP14.89□□□□□ -0.03
USP39-206ENST00000448971 H2AFZP0C0S5 128 aa14.89□□□□□ -0.03
USP39-206ENST00000448971 VAV1P15498 845 aa14.89□□□□□ -0.03
USP39-206ENST00000448971 CD6P30203 668 aa14.89□□□□□ -0.03
USP39-206ENST00000448971 SSR1P43307 286 aaKnown RBP14.89□□□□□ -0.03
USP39-206ENST00000448971 PSMD8P48556 350 aa14.89□□□□□ -0.03
USP39-206ENST00000448971 TPMTP51580 245 aa14.89□□□□□ -0.03
USP39-206ENST00000448971 SLC14A1Q13336 389 aa14.89□□□□□ -0.03
USP39-206ENST00000448971 HNRNPDQ14103 355 aaKnown RBP14.89□□□□□ -0.03
USP39-206ENST00000448971 PIGHQ14442 188 aaPredicted RBP14.89□□□□□ -0.03
USP39-206ENST00000448971 ELAVL3Q14576 367 aaKnown RBP14.89□□□□□ -0.03
USP39-206ENST00000448971 ACAP1Q15027 740 aa14.89□□□□□ -0.03
USP39-206ENST00000448971 ZNF423Q2M1K9 1284 aa14.89□□□□□ -0.03
USP39-206ENST00000448971 SMTNL2Q2TAL5 461 aa14.89□□□□□ -0.03
USP39-206ENST00000448971 PPP6R3Q5H9R7 873 aaPredicted RBP14.89□□□□□ -0.03
USP39-206ENST00000448971 ERMARDQ5T6L9 678 aa14.89□□□□□ -0.03
USP39-206ENST00000448971 RETSATQ6NUM9 610 aa14.89□□□□□ -0.03
USP39-206ENST00000448971 LINGO4Q6UY18 593 aa14.89□□□□□ -0.03
USP39-206ENST00000448971 Q6ZVU0 165 aa14.89□□□□□ -0.03
USP39-206ENST00000448971 H2AFVQ71UI9 128 aa14.89□□□□□ -0.03
USP39-206ENST00000448971 METTL3Q86U44 580 aaKnown RBP14.89□□□□□ -0.03
USP39-206ENST00000448971 PROSER1Q86XN7 944 aa14.89□□□□□ -0.03
USP39-206ENST00000448971 SH2D3CQ8N5H7 860 aa14.89□□□□□ -0.03
USP39-206ENST00000448971 RTL3Q8N8U3 475 aaKnown RBP14.89□□□□□ -0.03
USP39-206ENST00000448971 GANCQ8TET4 914 aa14.89□□□□□ -0.03
USP39-206ENST00000448971 CCDC114Q96M63 670 aa14.89□□□□□ -0.03
USP39-206ENST00000448971 HSPA12BQ96MM6 686 aa14.89□□□□□ -0.03
USP39-206ENST00000448971 ANP32EQ9BTT0 268 aa14.89□□□□□ -0.03
USP39-206ENST00000448971 RETREG1Q9H6L5 497 aa14.89□□□□□ -0.03
USP39-206ENST00000448971 ZWILCHQ9H900 591 aa14.89□□□□□ -0.03
USP39-206ENST00000448971 NDFIP2Q9NV92 336 aa14.89□□□□□ -0.03
USP39-206ENST00000448971 TARSL2A2RTX5 802 aaKnown RBP14.88□□□□□ -0.03
USP39-206ENST00000448971 MEI4A8MW99 385 aa14.88□□□□□ -0.03
USP39-206ENST00000448971 EIF3CLB5ME19 914 aaKnown RBP14.88□□□□□ -0.03
USP39-206ENST00000448971 MYO1FO00160 1098 aa14.88□□□□□ -0.03
USP39-206ENST00000448971 DAPK3O43293 454 aa14.88□□□□□ -0.03
USP39-206ENST00000448971 SH3BP5O60239 455 aa14.88□□□□□ -0.03
USP39-206ENST00000448971 SYPP08247 313 aa14.88□□□□□ -0.03
USP39-206ENST00000448971 TMEM253P0C7T8 217 aa14.88□□□□□ -0.03
USP39-206ENST00000448971 SRCP12931 536 aa14.88□□□□□ -0.03
USP39-206ENST00000448971 GLDCP23378 1020 aa14.88□□□□□ -0.03
USP39-206ENST00000448971 HTR7P34969 479 aa14.88□□□□□ -0.03
USP39-206ENST00000448971 PCK1P35558 622 aa14.88□□□□□ -0.03
USP39-206ENST00000448971 GJC1P36383 396 aa14.88□□□□□ -0.03
USP39-206ENST00000448971 RPS14P62263 151 aaKnown RBP14.88□□□□□ -0.03
USP39-206ENST00000448971 ZBTB16Q05516 673 aa14.88□□□□□ -0.03
USP39-206ENST00000448971 TRIP6Q15654 476 aaKnown RBP14.88□□□□□ -0.03
USP39-206ENST00000448971 CA9Q16790 459 aa14.88□□□□□ -0.03
USP39-206ENST00000448971 ASTE1Q2TB18 679 aaPredicted RBP14.88□□□□□ -0.03
USP39-206ENST00000448971 ARTNQ5T4W7 220 aa14.88□□□□□ -0.03
USP39-206ENST00000448971 C9orf64Q5T6V5 341 aa14.88□□□□□ -0.03
USP39-206ENST00000448971 C22orf39Q6P5X5 142 aa14.88□□□□□ -0.03
USP39-206ENST00000448971 DSG4Q86SJ6 1040 aa14.88□□□□□ -0.03
USP39-206ENST00000448971 MMAAQ8IVH4 418 aaKnown RBP14.88□□□□□ -0.03
USP39-206ENST00000448971 STK40Q8N2I9 435 aa14.88□□□□□ -0.03
USP39-206ENST00000448971 ARFGAP1Q8N6T3 406 aa14.88□□□□□ -0.03
USP39-206ENST00000448971 TC2NQ8N9U0 490 aa14.88□□□□□ -0.03
USP39-206ENST00000448971 OR8D1Q8WZ84 308 aa14.88□□□□□ -0.03
USP39-206ENST00000448971 HSPH1Q92598 858 aa14.88□□□□□ -0.03
USP39-206ENST00000448971 PTPRN2Q92932 1015 aa14.88□□□□□ -0.03
USP39-206ENST00000448971 TOE1Q96GM8 510 aaKnown RBP14.88□□□□□ -0.03
USP39-206ENST00000448971 KCTD15Q96SI1 283 aaPredicted RBP14.88□□□□□ -0.03
USP39-206ENST00000448971 EIF3CQ99613 913 aaKnown RBP14.88□□□□□ -0.03
USP39-206ENST00000448971 RSPH9Q9H1X1 276 aaPredicted RBP14.88□□□□□ -0.03
USP39-206ENST00000448971 UVRAGQ9P2Y5 699 aa14.88□□□□□ -0.03
USP39-206ENST00000448971 HPCAL4Q9UM19 191 aa14.88□□□□□ -0.03
USP39-206ENST00000448971 HS3ST2Q9Y278 367 aa14.88□□□□□ -0.03
USP39-206ENST00000448971 ATP9BO43861 1147 aa14.87□□□□□ -0.03
USP39-206ENST00000448971 IL1BP01584 269 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms