RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 TMEM150AQ86TG1 271 aa18■□□□□ 0.47
LMNA-208ENST00000448611 CFAP52Q8N1V2 620 aa18■□□□□ 0.47
LMNA-208ENST00000448611 AZIN2Q96A70 460 aa18■□□□□ 0.47
LMNA-208ENST00000448611 PABPC5Q96DU9 382 aaKnown RBP18■□□□□ 0.47
LMNA-208ENST00000448611 IMP4Q96G21 291 aaKnown RBP18■□□□□ 0.47
LMNA-208ENST00000448611 RETREG1Q9H6L5 497 aa18■□□□□ 0.47
LMNA-208ENST00000448611 ENTPD7Q9NQZ7 604 aa18■□□□□ 0.47
LMNA-208ENST00000448611 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18■□□□□ 0.472e-6■□□□□ 9.5
LMNA-208ENST00000448611 MAFFQ9ULX9 164 aa18■□□□□ 0.47
LMNA-208ENST00000448611 RRP15Q9Y3B9 282 aaKnown RBP18■□□□□ 0.47
LMNA-208ENST00000448611 COPEO14579 308 aa18■□□□□ 0.47
LMNA-208ENST00000448611 PMPCBO75439 489 aa18■□□□□ 0.47
LMNA-208ENST00000448611 ACVRL1P37023 503 aa18■□□□□ 0.47
LMNA-208ENST00000448611 IFT88Q13099 833 aa18■□□□□ 0.47
LMNA-208ENST00000448611 DNAJC3Q13217 504 aa18■□□□□ 0.47
LMNA-208ENST00000448611 MPP3Q13368 585 aa18■□□□□ 0.47
LMNA-208ENST00000448611 SEPT7Q16181 437 aaKnown RBP18■□□□□ 0.47
LMNA-208ENST00000448611 CGB2Q6NT52 195 aa18■□□□□ 0.47
LMNA-208ENST00000448611 KDELC1Q6UW63 502 aa18■□□□□ 0.47
LMNA-208ENST00000448611 RANBP10Q6VN20 620 aa18■□□□□ 0.47
LMNA-208ENST00000448611 DENND1CQ8IV53 801 aa18■□□□□ 0.47
LMNA-208ENST00000448611 CCDC117Q8IWD4 279 aaPredicted RBP18■□□□□ 0.47
LMNA-208ENST00000448611 SRPK1Q96SB4 655 aaKnown RBP18■□□□□ 0.47
LMNA-208ENST00000448611 KLF16Q9BXK1 252 aaPredicted RBP18■□□□□ 0.47
LMNA-208ENST00000448611 VPS11Q9H270 941 aa18■□□□□ 0.47
LMNA-208ENST00000448611 RXFP1Q9HBX9 757 aa18■□□□□ 0.47
LMNA-208ENST00000448611 NT5MQ9NPB1 228 aa18■□□□□ 0.47
LMNA-208ENST00000448611 GKN1Q9NS71 199 aa18■□□□□ 0.47
LMNA-208ENST00000448611 H3BNC9 293 aa17.99■□□□□ 0.47
LMNA-208ENST00000448611 FGF18O76093 207 aa17.99■□□□□ 0.47
LMNA-208ENST00000448611 SYN1P17600 705 aa17.99■□□□□ 0.47
LMNA-208ENST00000448611 CORO1AP31146 461 aaKnown RBP17.99■□□□□ 0.47
LMNA-208ENST00000448611 HTRA4P83105 476 aaPredicted RBP17.99■□□□□ 0.47
LMNA-208ENST00000448611 SMAD1Q15797 465 aaKnown RBP17.99■□□□□ 0.47
LMNA-208ENST00000448611 PCID2Q5JVF3 399 aa17.99■□□□□ 0.47
LMNA-208ENST00000448611 ZNF354CQ86Y25 554 aa17.99■□□□□ 0.47
LMNA-208ENST00000448611 PRICKLE1Q96MT3 831 aaPredicted RBP17.99■□□□□ 0.47
LMNA-208ENST00000448611 ZBP1Q9H171 429 aa17.99■□□□□ 0.47
LMNA-208ENST00000448611 PCDHB12Q9Y5F1 795 aa17.99■□□□□ 0.47
LMNA-208ENST00000448611 ZFP37Q9Y6Q3 630 aaPredicted RBP17.99■□□□□ 0.47
LMNA-208ENST00000448611 PRAMEF11O60813 436 aa17.98■□□□□ 0.47
LMNA-208ENST00000448611 NMBRP28336 390 aa17.98■□□□□ 0.47
LMNA-208ENST00000448611 GP5P40197 560 aa17.98■□□□□ 0.47
LMNA-208ENST00000448611 EPHB3P54753 998 aa17.98■□□□□ 0.47
LMNA-208ENST00000448611 WNT3AP56704 352 aa17.98■□□□□ 0.47
LMNA-208ENST00000448611 SF3A3Q12874 501 aaKnown RBP eCLIP17.98■□□□□ 0.47
LMNA-208ENST00000448611 ANKS4BQ8N8V4 417 aa17.98■□□□□ 0.47
LMNA-208ENST00000448611 LRRC8CQ8TDW0 803 aa17.98■□□□□ 0.47
LMNA-208ENST00000448611 ZNF75CPQ92670 426 aaPredicted RBP17.98■□□□□ 0.47
LMNA-208ENST00000448611 ZNF778Q96MU6 729 aa17.98■□□□□ 0.47
LMNA-208ENST00000448611 FAM111AQ96PZ2 611 aa17.98■□□□□ 0.47
LMNA-208ENST00000448611 CPNE1Q99829 537 aa17.98■□□□□ 0.47
LMNA-208ENST00000448611 FSD1LQ9BXM9 530 aa17.98■□□□□ 0.47
LMNA-208ENST00000448611 PITPNM3Q9BZ71 974 aa17.98■□□□□ 0.47
LMNA-208ENST00000448611 UXTQ9UBK9 157 aaPredicted RBP17.98■□□□□ 0.47
LMNA-208ENST00000448611 STK39Q9UEW8 545 aa17.98■□□□□ 0.47
LMNA-208ENST00000448611 USP15Q9Y4E8 981 aaPredicted RBP17.98■□□□□ 0.47
LMNA-208ENST00000448611 ALDOAP04075 364 aaKnown RBP17.98■□□□□ 0.47
LMNA-208ENST00000448611 MMP2P08253 660 aa17.98■□□□□ 0.47
LMNA-208ENST00000448611 ITGA2BP08514 1039 aa17.98■□□□□ 0.47
LMNA-208ENST00000448611 CDH4P55283 916 aa17.98■□□□□ 0.47
LMNA-208ENST00000448611 MAXP61244 160 aa17.98■□□□□ 0.47
LMNA-208ENST00000448611 RABGAP1LQ5R372 815 aa17.98■□□□□ 0.47
LMNA-208ENST00000448611 TEDDM1Q5T9Z0 273 aa17.98■□□□□ 0.47
LMNA-208ENST00000448611 PKN3Q6P5Z2 889 aa17.98■□□□□ 0.47
LMNA-208ENST00000448611 POTEHQ6S545 545 aa17.98■□□□□ 0.47
LMNA-208ENST00000448611 FAM47EQ6ZV65 393 aa17.98■□□□□ 0.47
LMNA-208ENST00000448611 CNPY4Q8N129 248 aa17.98■□□□□ 0.47
LMNA-208ENST00000448611 PGBD5Q8N414 524 aa17.98■□□□□ 0.47
LMNA-208ENST00000448611 NSMCE1Q8WV22 266 aa17.98■□□□□ 0.47
LMNA-208ENST00000448611 WBP2Q969T9 261 aa17.98■□□□□ 0.47
LMNA-208ENST00000448611 TADA1Q96BN2 335 aa17.98■□□□□ 0.47
LMNA-208ENST00000448611 PDFQ9HBH1 243 aa17.98■□□□□ 0.47
LMNA-208ENST00000448611 ZNF334Q9HCZ1 680 aaPredicted RBP17.98■□□□□ 0.47
LMNA-208ENST00000448611 ATP13A1Q9HD20 1204 aa17.98■□□□□ 0.47
LMNA-208ENST00000448611 VPS45Q9NRW7 570 aa17.98■□□□□ 0.47
LMNA-208ENST00000448611 PCMTD2Q9NV79 361 aa17.98■□□□□ 0.47
LMNA-208ENST00000448611 AGO1Q9UL18 857 aaKnown RBP17.98■□□□□ 0.47
LMNA-208ENST00000448611 PLLPQ9Y342 182 aa17.98■□□□□ 0.47
LMNA-208ENST00000448611 ZBBXA8MT70 800 aa17.97■□□□□ 0.47
LMNA-208ENST00000448611 ANKRD65E5RJM6 399 aa17.97■□□□□ 0.47
LMNA-208ENST00000448611 F11P03951 625 aa17.97■□□□□ 0.47
LMNA-208ENST00000448611 CTSAP10619 480 aa17.97■□□□□ 0.47
LMNA-208ENST00000448611 RPS24P62847 133 aaKnown RBP17.97■□□□□ 0.47
LMNA-208ENST00000448611 DSC2Q02487 901 aa17.97■□□□□ 0.47
LMNA-208ENST00000448611 CREMQ03060 361 aa17.97■□□□□ 0.47
LMNA-208ENST00000448611 IHHQ14623 411 aa17.97■□□□□ 0.47
LMNA-208ENST00000448611 POU6F1Q14863 301 aa17.97■□□□□ 0.47
LMNA-208ENST00000448611 GRTP1Q5TC63 336 aa17.97■□□□□ 0.47
LMNA-208ENST00000448611 SPATA21Q7Z572 469 aa17.97■□□□□ 0.47
LMNA-208ENST00000448611 KCNMB4Q86W47 210 aa17.97■□□□□ 0.47
LMNA-208ENST00000448611 NDUFAF2Q8N183 169 aa17.97■□□□□ 0.47
LMNA-208ENST00000448611 OR52K2Q8NGK3 314 aa17.97■□□□□ 0.47
LMNA-208ENST00000448611 ACMSDQ8TDX5 336 aa17.97■□□□□ 0.47
LMNA-208ENST00000448611 GRAMD1AQ96CP6 724 aa17.97■□□□□ 0.47
LMNA-208ENST00000448611 AGAP2Q99490 1192 aa17.97■□□□□ 0.47
LMNA-208ENST00000448611 SLC13A1Q9BZW2 595 aa17.97■□□□□ 0.47
LMNA-208ENST00000448611 MAGEH1Q9H213 219 aa17.97■□□□□ 0.47
LMNA-208ENST00000448611 IL21Q9HBE4 155 aa17.97■□□□□ 0.47
LMNA-208ENST00000448611 ARNT2Q9HBZ2 717 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms