RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, human

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-205	ENST00000445329	F8A1	P23610	371 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	PTX3	P26022	381 aa	Predicted RBP	6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	PIK3R1	P27986	724 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	TM4SF1	P30408	202 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	HOXA6	P31267	233 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	MAPK12	P53778	367 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	CASP6	P55212	293 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	AP1S2	P56377	157 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	CLC	Q05315	142 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	MGAT3	Q09327	533 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	ZNF846	Q147U1	533 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	ZYX	Q15942	572 aa	Known RBP	6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	TMEM95	Q3KNT9	176 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	RETSAT	Q6NUM9	610 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	RNF207	Q6ZRF8	634 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	AACS	Q86V21	672 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	SNX31	Q8N9S9	440 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	TRMT2B	Q96GJ1	504 aa	Known RBP	6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	ZNF578	Q96N58	590 aa	Predicted RBP	6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	FOPNL	Q96NB1	174 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	THTPA	Q9BU02	230 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	LSM14B	Q9BX40	385 aa	Known RBP	6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	EPB41L4B	Q9H329	900 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	SLCO1B3	Q9NPD5	702 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	KCNH7	Q9NS40	1196 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	BMP2K	Q9NSY1	1161 aa	Predicted RBP	6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	LUZP4	Q9P127	313 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	MBD1	Q9UIS9	605 aa	Predicted RBP	6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	QSER1	Q2KHR3	1735 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329		A0A0G2JPF8	293 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	ESYT2	A0FGR8	921 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	HNRNPCL3	B7ZW38	293 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	PODXL	O00592	558 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	CYP26A1	O43174	497 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	RIPK2	O43353	540 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	MAGEC1	O60732	1142 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	RFPL2	O75678	378 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	ZBTB7A	O95365	584 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	FTCD	O95954	541 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	KRT1	P04264	644 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	HNRNPCL4	P0DMR1	293 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	BRAF	P15056	766 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	ZNF182	P17025	639 aa	Predicted RBP	6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	SLC9A1	P19634	815 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	MAP4	P27816	1152 aa	Known RBP	6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	YWHAE	P62258	255 aa	Known RBP	6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	NME3	Q13232	169 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	VEPH1	Q14D04	833 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	NECTIN1	Q15223	517 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	ERFE	Q4G0M1	354 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	FSCB	Q5H9T9	825 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	C6orf52	Q5T4I8	152 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	SHC4	Q6S5L8	630 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	RNF111	Q6ZNA4	994 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	CCDC149	Q6ZUS6	474 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	ULK2	Q8IYT8	1036 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	SLC37A3	Q8NCC5	494 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	TMEM35B	Q8NCS4	154 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	PPHLN1	Q8NEY8	458 aa	Known RBP	6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	MARVELD3	Q96A59	401 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	SIPA1	Q96FS4	1042 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	PACSIN1	Q9BY11	444 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	UNC93B1	Q9H1C4	597 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	NGRN	Q9NPE2	291 aa	Known RBP	6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	PRDM8	Q9NQV8	689 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	IARS2	Q9NSE4	1012 aa	Known RBP	6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	PKD2L2	Q9NZM6	624 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	SH3BGRL2	Q9UJC5	107 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	RAB26	Q9ULW5	256 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	SLC6A14	Q9UN76	642 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	PACSIN2	Q9UNF0	486 aa	Predicted RBP	6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	PCDHA13	Q9Y5I0	950 aa		6.9	□□□□□ -1.3
TRIM6-205	ENST00000445329	MED23	Q9ULK4	1368 aa		6.9	□□□□□ -1.31
TRIM6-205	ENST00000445329	TAF1	P21675	1872 aa		6.9	□□□□□ -1.31
TRIM6-205	ENST00000445329	COL4A1	P02462	1669 aa		6.9	□□□□□ -1.31
TRIM6-205	ENST00000445329	TRBV23-1	A0A0A0MS06	115 aa		6.9	□□□□□ -1.31
TRIM6-205	ENST00000445329	FOXO6	A8MYZ6	492 aa		6.9	□□□□□ -1.31
TRIM6-205	ENST00000445329	NT5C1B-RDH14	C9J2C7	533 aa		6.9	□□□□□ -1.31
TRIM6-205	ENST00000445329	ZNF701	M0R085	212 aa	Predicted RBP	6.9	□□□□□ -1.31
TRIM6-205	ENST00000445329	PDHX	O00330	501 aa		6.9	□□□□□ -1.31
TRIM6-205	ENST00000445329	CTDSP2	O14595	271 aa		6.9	□□□□□ -1.31
TRIM6-205	ENST00000445329	FPGT	O14772	594 aa		6.9	□□□□□ -1.31
TRIM6-205	ENST00000445329	IL6	P05231	212 aa		6.9	□□□□□ -1.31
TRIM6-205	ENST00000445329	IFIT1	P09914	478 aa	Known RBP	6.9	□□□□□ -1.31
TRIM6-205	ENST00000445329	SLC2A3	P11169	496 aa		6.9	□□□□□ -1.31
TRIM6-205	ENST00000445329	EPB42	P16452	691 aa		6.9	□□□□□ -1.31
TRIM6-205	ENST00000445329	NELFE	P18615	380 aa	Known RBP	6.9	□□□□□ -1.31
TRIM6-205	ENST00000445329	HOXA1	P49639	335 aa	Predicted RBP	6.9	□□□□□ -1.31
TRIM6-205	ENST00000445329	TPMT	P51580	245 aa		6.9	□□□□□ -1.31
TRIM6-205	ENST00000445329	TKTL1	P51854	596 aa		6.9	□□□□□ -1.31
TRIM6-205	ENST00000445329	ERVFC1	P60507	584 aa		6.9	□□□□□ -1.31
TRIM6-205	ENST00000445329	IL9R	Q01113	521 aa		6.9	□□□□□ -1.31
TRIM6-205	ENST00000445329	ZBTB16	Q05516	673 aa		6.9	□□□□□ -1.31
TRIM6-205	ENST00000445329	SETMAR	Q53H47	684 aa	Predicted RBP	6.9	□□□□□ -1.31
TRIM6-205	ENST00000445329	PITRM1	Q5JRX3	1037 aa		6.9	□□□□□ -1.31
TRIM6-205	ENST00000445329	RABGAP1L	Q5R372	815 aa		6.9	□□□□□ -1.31
TRIM6-205	ENST00000445329	ATAD3C	Q5T2N8	411 aa		6.9	□□□□□ -1.31
TRIM6-205	ENST00000445329	GPR107	Q5VW38	600 aa		6.9	□□□□□ -1.31
TRIM6-205	ENST00000445329	ERAP2	Q6P179	960 aa		6.9	□□□□□ -1.31
TRIM6-205	ENST00000445329	C5orf46	Q6UWT4	87 aa		6.9	□□□□□ -1.31

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms